XLOC_014340 (gene) - C. hemisphaerica

Overview
NameXLOC_014340
Unique NameXLOC_014340
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000539:9881..16818+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014340 ID=XLOC_014340|Name=XLOC_014340|organism=Clytia hemisphaerica|type=gene|length=6938bp|location=Sequence derived from alignment at sc0000539:9881..16818+ (Clytia hemisphaerica)
NNaaaataaaaaTTTTAAAATGTGATTAAAAATTTGAGCAAGTTattcaa
aaagattcaaatcGAAATTATTGATACTGGACTTGATCACTGTTCCTTTG
GCTCGGTCCCTGATTGCTTAAAGTTGAACTTCAATTCAGGTATATTTTGC
ATTAATTTTACCTTGACTTTCCTTTGTAATGaaagaggccccccagcggt
ttgcttGATGTCGTGATTAGAGATCTTtatggcgtgatggcgtgatcaag
attttggcgtgacacgtgatagggcaaaaatttgaggcgtgatgcgtgat
ttgggctatttttcgcttttttttgcgtgatgacaaattttagctatctt
cgtgatgcgtgatggagaaaatttttttgcatgatTGCGTGATTgtgggt
gccgctgggggggggctcATGACACTGGTTTTGGATAAAACTTTTCATTC
TGATGTGCCTAATAAGTACCCCTAAATAGCTAAATAGCCAGGTCTTTGAT
TACCTTATTTTTGGTAGAGGGGTACAATTTTCAGTTCCCCACAATAAAGT
CCTCATTTATTACAGACACTGAGTTTATGGAAAGGGATTTATATCTGATG
TTGACAACATTACAATAGTCATAGGGAAGGTTGTTTATGCAAGGAAATGA
TATCAATTTTTGGTTCTTATaacaaactttttataaaacggTACATCTGA
AAGACGTTTAAAAGATGCTTTATGGACGTTGATAGTTTTAAAATCCAGGG
ATAACCTTGGATATTCAAGGAGaactgatatcaatttttgGTTCTTATAA
CAAACTTTTTATAAATCGGTACATCTTAAAGACGTTTAAAAGATGCTTTA
TGGACGTTAATGGTTTTAGAATCCAGGGATAACCTTGGATATCCAAGGAT
AACACTGtttaaaatcgaaaataaaCCTGGTACAATCTGGTACAACCATG
GACTTTAAATCAAAGGATAACCTTGGATAACCCGGGATTAAAAATATGGA
TATCCCATTTCAAAAAGTCCTTTATTATCCTTAATTGTACTTGATTTCTT
GTACTTGATATCCAAGGATTTTTGCTCCCAAGGTGTACTTAATTTTGTAC
TTGATTTGTCCAAAGTATATCCTTGGATTATCCTTGATTTTGATACCAGg
gcaatttcattttttgcctgtcgaaggttggagcttgcccaagcacatta
caggcaaaatttaaaaatatcaatttttgctcatagacttcttaaaaagg
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CAAATCTGTACGTCTTCATTTGGTTCCCTTTCTGGTTCAATTTCGTCCGT
TGGGTCGTTGGGCCAGGGTTCCTTATTCGTGAGGTGCTGGGAAATCTCTT
GGTACGCCATTGTGCTGCATTGTGTAACGTTTGGACTTTGTTCCTGCAGC
GGCACTTGTTAAAATTGTATACTTCATGGTCTTAGTATGCTACAGTTACA
AACCTTTTAAAAGCATTAATTCATGAAATTGTTGCTAAAAATGAATTGCA
GAGTCACTGCTTTTCTCTGTCCTGTTATCTGTATTTGACAATTGGTGCTC
AAGCTCTCTATTATATATTATAAGATTACTTATCTAATCTATCTGGATTG
GTTGAAACTTAAAATTATGATGCAAGTGACCTAGATGAACCAATCAGTgc
tcagaaaattttttgattgttataggtaagtacggcatgaaattacaaaa
ttttatttttcttcaacagtcataaaaaattaattatccaAGATGAGTGG
ATTAGTAACAACAGAATGGCTTGAGGAGCAAATGAAATCGCCGGATTGGA
AAGAAAAGTATTGTCTGTTAGATTGTACATGGGACTTACCAAAAGCCAAA
AGAAATTTCCAAGAAGAGCATAATAATTGTCGTATTCCTGGAGCAAAATT
ATTTGATTTGAACGAATGTCGCAATAAAGATGCTAAATTGCCCAACACGG
TTCCGTCTGAGTTGCATTTTGTAAATCATGTGAAGAAATTCCCTTTGTCC
AACGCTAAACACGTGATCTTGTATGATAACAGTGAGCGCTTTGGATTGTT
TTCTGCTCCAAGAGTATGGTggcttttcaatgtttttggacACTCCAACG
TTTCAATTGTAGATGGTGGATTACCAAAATGGAAAAGAGAAGGGAGAAAA
ATAGAATCTGGGCCTTATACAGAAGACGAAAACTTTCCAGGTATTCATTA
TatactttaacaaatgaacacttAACAATAAGAACCGAtaataacaaaaa
ggaaaattttaacaagtttaaggtctatctacactgtaattaAATATTGA
ATTGTTCGAATTTAACTAGCGGGGGAGGAAGGGTCTTAATAATAGCTGGG
GAGGGTCTTAATAACAGCgaggggggacgtctattcgagAGACAAGAGTA
ATTTAGTACCTgtttttttcgtatttttagTCTATGCTTTAATAGGATAA
ATTTTCACGGATCTTTTTCGCACAATTCATCGCGTGAAATTGCGATGGAT
CGCTGCCTCAATAAACAGTAAAATGCGATGCATTTAGCCCATAGAATaca
ttttacacccctgtctcacagccccggtgaaacttttttcccattttctc
tCTATTGTTCCTCAGtcgaaaaatccaatggggatagttttggagtgcaa
ttttttaaattgaattttggatggggatgaaatcaaagtaaatttcaAAG
TGGGGCTGAAGTTGTggggtatttttccaccggggacgaaattttggtcg
AATTTTCCTATTGTGCTTGGGTCCcagcaggtctgtgacacagtgGTGTA
CATCTGTCttctgaaaattcttttttttcgtATTAAAGTAATAACAATAT
TAGGAATGAAAGTATCAATGTTTATAACGATGAATATCCCAAAGATTATA
GGATTTGTAGAATGACATCCTTCCAAGAAATAATTTAGGCTTCTCATTCT
TGAATGAGCTCTGATTAAACTTATTTTTGTAttgagaacaattttattaa
TCCTTACATATCCAATTTCCCTATCATTTATTTTTAGCCATTGAAAACGA
ATTCAAGGCAGCATACAATGCTGATCTTGTCAAAGATTTATCTTTCATGA
AGACGAACTTTGAGCAGAAATGTCCAGTCCAAGTCCTTGATGCAAGACCG
AACGGTAGATTCCGTGGTGTGGAACCAGAGCCACGTCCAGACATACCAAG
TGGTCATATGCCTTTATCCATCAGCATCCCTTTCTTCACAAATTTTAACA
TGCAAGAAAAGGTTATGTTTCCTACAGATGAGATTAAATCTAATTTAACA
AAAGCAGCAGTGGATTTGAATAAACCAATCGTTTCCAGTTGTGGTTCAGG
AATCACAGCTTCGGCACTcttgttttcactttttttggtgACTGGTCAAC
GGTATCCATTGTTTGATGATTCATGGTTTGGTTGGCAGacaaatacacca
aatacaccagAATGGCAACTAAGAGAGAAAACAGAAAACTAATGGATACT
TTACTTCTAAAAAAAGTCTACCGTCGCTCGGGGTAAGATTTAAATACCTG
ACTAAGATTCCACTTTTCCGAGAATCTTTCTTGAATTGAATTTTTACGAA
AAGTGACTTTATACAGACAGCTTTTGCATTTTAAGATATTACTTTCTAAC
ACTCTTATAGTGTCTAAATTATCATTTATATGTTTGCCTTTGTTATATGC
AACCGTTAACgactttatttatttgtttttaaagtttcTTATATCTTTGG
TATTATATCAAGCAGAAAACTGTCCCTGCACCCGTCAAAAGGGTAGTTTT
AAAGTTTGTTCCAAAAAGCAGTCAGTCTGCCATTTTAGTCAAAGTCATAG
CCCGTACGTTTTTATGCATTACATTGCTCTCGAAGAAATTAGGATataat
gaaaagaaataattagttggaaaaaaattttgagtgGATTTTTTGTTCTC
CTGTTATTTATATTCTATTTATTCATGAAGAGAAGACAAAAGTATTCACA
ATAACTGTTCTGGTTTCAGCTCTTTCACCAAAACTTCTTGCTCGTATAAT
TTAGTTagttttttcttctgaaatccCGACACTTTCTGTGAAAAAACACT
AaattttgccacaaaaatcctAGTTTTTATGGCCTACtacttgtttgttt
gtttattgtgatttttgtccatttttataATGTATTATTTGTAATcaagc
ttttttatttaatgACTAATATTTGTCTCACCAATTAATATAGTTGACGA
TAATAAATGatatttaatttgattttcacaaGGTAGCAGTTTNTATAGTT
GACGACAATAAATGatatttaatttgattttcacaaGGTAGCAGTTTTTA
TTAACATGGGTGAAACCTAGTTTTAGCCTACAAAATGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025535TCONS_00025535Clytia hemisphaericatranscript
TCONS_00025536TCONS_00025536Clytia hemisphaericatranscript
TCONS_00025537TCONS_00025537Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025536-proteinTCONS_00025536-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539supercontigsc0000539:9881..16818 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TSTthiosulfate sulfurtransferase Homo Sapiens
MPST3-mercaptopyruvate sulfurtransferase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.25	39.08	65.58	72.85	145.19	109.02	61.29	65.02	56.1	57.57	45.18	46.87	19.92	19.04	13.13	14.24	27.77	28.1	17.54	24.43	27.94	28.7	34.57	34.63	28.53	26.24	31.44	23.55	21.99	22.99