XLOC_014385 (gene) - C. hemisphaerica

Overview
NameXLOC_014385
Unique NameXLOC_014385
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000541:105662..110642+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014385 ID=XLOC_014385|Name=XLOC_014385|organism=Clytia hemisphaerica|type=gene|length=4981bp|location=Sequence derived from alignment at sc0000541:105662..110642+ (Clytia hemisphaerica)
CTAAATTTCATTTATTTCCCCGTCCAGGTTATTTTTGGCGGGGGCGACTG CGGCGGAAACTAATCCGCCCGAGCGTAGTTTTGGACCATGGATTTAAgaa tgtaaacaaaaacattcCAAAGTGGACCTTGGACAGCAAATTCATCTTTT CATTTCAGCAGAAATAGAATTCAGAGCAAAAGCCCACCCCTCTAAGAACA GCTATGGCATTTGTACAAAGAGATTCACTTCTGTTAGCTTTGAAAGCAGG CTGTACAGCTGGAGTAGGTCTAGTTGCTGGTTCTGCTCTTTACATCAATG TGGTTGAAGTTCCATGTGCTCTCGATTATGATGCAGAACATGCTTTGCAA TGTTGGAACAGCAACTTCAAAAGAGGAAAGAAGTTTGGAGTAAGTGCtta tttacatgttttttttttataagcaagtgtatgccccttggtcaggctcg tgtatgcttaagttctcaaagcatccaggcatagtttgtgcttattatat gcttaagaattatgcttatgattcaccccgacccaattttttaatgaaat ttcagaaattttgtaaaaatttgttcagattttgggagcagtggaatgta gctagccgtggaatgtcttattttttacttgacctctaccaaactttttt atacagataaaaatgaccacttgaaaaatattttaggctgacatatatgc tcatgttatgcttaggaattctgcaaatctgagccttcatatgcttataa tgcttataagcgttatgcttataaaaaaaaaacatgtatgtcaATTGTGG GGCCTTCAAAATCTTGCTCGTTAGACGTCTCTCGTTAGGACCAAATCAGT GCAGCTCTTGTGAGAGTAATGGCAGATACATCTTTACAGTTCATTTTACC TAACCTTTCTGatccttacagtgtagtttgaatTCATATTTGAAGCCATC CTTAAAAATAAGCCTGAGATGTCGCTCGTCATCCATTGGCATAAATGTAT GTACCACCgacaactgctctaacttggtggtgggacgattggtcgaaaca tgggactgttgcttatctggtctgtattttcacttatataaaatgaaaga gaaatcgtgtatttttaaatacgccgttccttaactcaaatcaaatgact ttgtaGGTTTgctgaaatggtggccaaattgccatcccatgttttatcgg atagtcccaagttagagcaggtTGACAgtacaaaacaaataaaaaatgca aaatgatTGATTGGAGTCGAAACTttaaagatttatccttacatACATTG CATCTATCTAAAACGACACTAAAGTGAAGTGcgctctatcaaaagtacat ccTTATACAGTGCATTTTGAGGGTCTTGAAAAACCTACCTGTACTAAAGG TGCAGTATCCCCCGCAAGGGATTCTTAATCTGCGTTTGCCTGACTATTGA ATCCAGTTTTAACAGAAATTTGCATcaataccgtgaagtcgggtaacttg catcagtggaggctaacatgcatagccctaaaataaatcaaaatctgAGA AATCGCAATCAAAATTACAACTTAAAGCTGAGCGGAAACaacttttatca acatttttaaaagatctatctatatattaatagcggtgctttgtgtgtct gtgtgtcaccactttcgttttcactttgtttgtgtttaaaattatgactt ttagtctcttgctccacaaatttgttctattgcATTCGCGCCATTCgcaa aagatcggatagagcttggtttagactttattcagcctttgttttgaaat ttaaggcccatctacatttagtgaCTTTAATTTCTTCATAGACTtgcctt tttctcttttcttttgttttaaatgttttcgaatgtatttaacgatcgta tttattagtgacattcgaattcttttcaaaacaaaacaatttcatttcat agaaaagaatatttcaaaagtacatgttttttttttataagcataacgct tataagcatatgaaggctcagatttgcagaattcctaagcataacatgag catatatgtcagcctaaaatattNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNAGctaacattccactgctcccaaaatctgaacaaatt tttacaaaatttctgaaatttcattaaaaacttggctcggggtgaatcat aagcatgattcttaagcatataataaacataaactatgcctggatgcttt gagaacttaaacatacacgagcctgaccaaggggcatacacttgcttata aaaaaaaaacatgtaaatcaaaccataaaaatcaaaaagtttgtgtacaa caacagcattcaaagggcgatatttcacttctttcttcttataaaaatgt tcaagtcgtcgttactgttaaaaagtgtgtacgtcattttttatgtttaa attcgaaaagttatgacaagggtttaaaaaagcaacttagaattgtctta ttttttttcgatctgataaaaacaaagagttgcactattctttgtgacct tcccactttgtcctgaaaaattgtcatttaaactggacggcatatttaac gcgagcgaagcgagaaaaataactacctgcagagtcgtttcagacgacac tggtacagtaaacgatgctctttcagataacttaaacaaaaaattatgtc gCGGGGGGGACAGTACACGATCCAtgtatggttaaaagataagacacccg ggaaaggttagagttaaacgttgtagagatttcttttttttatttgatca tttttttaaagccagcttcaacatccaaaggacttttagtgcgttcagct acagcttaaccggcgtgcgacgccgggtaccggctagtattcTATAATTT TGGGAGCTGTTTTAAAACTAGCTTTGAACATGCTATAAATCAAGTGATGG TAGTCACTGATTCCTGTTTCAAAAGTCCCACTGTTTTTAAAACAAAGAGG CTGATTTGTAAGGATCTAAGCAATGCATCTACCTTTCTTTGACTTAAAGC ATGTTGgggttttcatcaaatttttcagaaaaggaTAACCTATCCTCTGT ACATATAAAAAATTCTCACAACAATCAGCATTTTGAAGAGTTTTGCATGA ATTTAGTATCACGAATCAGCCAAAACTTTTGGTTGAAAGTTGCCCTAAAA ACACTAGAAATAGCAAAAATTACAATGTACTTTTAAGCTGAATATATTAT ATAGGAAATTTTgtgtggatttaattttgcaagatttattttctcaaaaa atagtgaaaatacatgaaaattaaatcttttgtatataatctttttgaaa agaatcacaaaattattttcttgtttttcagCCTCTGACATATAGTGCAG CATTTCTGATGGCTATTGGACATTATGCTTTAACAAAAGGTACAGAGAAA GCAGATAAGAAGCTTCTGGTTGCACTTTTACTTGGTGAACTTGTGTTCCC TTACACATTACTTTTCGTCCAACCAACAAACAACCTCTTATTAGATGTAG AGGAATGCAAGAAGCAAGGTAACATAATTATTTGGTTCATATGTATGTTT AATTTGGTCCCaactttttagaaaatcaaaactctatatacttttttaaa aggaagaaatctttacggaagaaactttcgtAAGTATTTAGGTTCCGCAA AATATGACGAAGGTCCCCATTCGTGAAAGTTAATTCCCgcaaaatatggt caaaatTGTCATTTGTCATTTGCAAAAGTTAATTCCTGCGAATTATATAC gtaattttttcaccaaaactttttttcttacaGGAGGATAGGTGAACCCC CTATAAAATGTGCTTTTATAATGCATTTCCTCTTCTCatgtaaaaataca aaaataggtGTACTTGTGAAGAAAagcttcaaaaacattttctgactATT ATTGATTTCAGGATCAGACTACATTGTTTCGAATTATCACAAGTGGAACA AACTTCATGCCGTCCGTTCACTCATCTGTTGTAGCACTTTTGGTTATGCA TTATATCGCCTTGCTGCAAACTAAGTTATATCCAACAATCGGAAATATTT TATTAGAATactttgagttttgtttattttatatattagatgaaaatttt ttgtaaacttAGATTAGAGTGAATTTGATTTGATTAATGGTGCACCCTTA TATTTTACAGTATTTTATTTTCCGTGTCATTCTTCACGATCTCACAtaca aaaaaaacacttttaagcTATCTGATGAATTTCACTTAGTTTAATATAGA GAAATTTCAAAGGTTTTTGTAAAATGAATGATTATATTTTGTCAGACTTT GTCAGTGATTTCCCCTCTTTTAAtcatttcttttctattttttgttagct tactattttgtatttatttacCATGTGCACATTTGTCACACATATATGTA ATATATATTCAAATCAAACACGAAAAGTTCCATTTTTCTGATCAATTGTG GGTCAAATCTGGTCAAGTGTAAACATAGCATTTCGACATTAAACTGTAAA CAAATTTGTCATTGTTCTACGATTACTAACGACCCGCATGATTCCcattg attttttctcaatgaaCCCAGGCtactttaatcttttttttcacaaCTTT CCACAAAAATGCATCTGGCTAAGGATTTACCAAGGATATCACGTTTAAGG AAAATAACGTGCCGTTGGTCAGCGTTCCTTTTTANCGAgtatcttgatgt tcttataaagctcggagacagagatggaacagcaattaactgaaaagaca atgcggtacatattccagccgcggctttctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025627TCONS_00025627Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025627-proteinTCONS_00025627-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000541supercontigsc0000541:105662..110642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
217.77 233.39 108.19 91.77 34.58 26.31 44.98 51.15 75.52 84.41 85.19 56.32 100.41 86.61 41.64 48.51 125.66 160.94 97.98 92.3 188.27 179.26 86.8 94.24 48.42 55.87 72.27 79.68 42.08 37.17