XLOC_014539 (gene) - C. hemisphaerica

Overview
NameXLOC_014539
Unique NameXLOC_014539
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000549:164426..167622-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014539 ID=XLOC_014539|Name=XLOC_014539|organism=Clytia hemisphaerica|type=gene|length=3197bp|location=Sequence derived from alignment at sc0000549:164426..167622- (Clytia hemisphaerica)
GATATGAAGTGTAAAAAGATCAAAAGTAAGAAAAATACCAAATGTGAACA
ACTTCTAATGTCCACAATTAACAAACTGTCATGTATTTGGCAGACGCTCA
GCAACAATGTAGACTTGTTTTCATCTATCTGGTGACGCTGTGGTTATTCG
TTCTCAAATGTAATGCAAATACTTTTGCTGTTTTGAAAAATCAACAAAAA
GCAAAATGTCATTTGAATGTATGGATGAACAACTTGACCTACACAGTCAC
TAATCCCGCTTATGGAAATCCATCATGGGACCAATTCGAGTTTGATTATT
GTCTTTATGGTCATGATTGTTCTCCAAATTCTAACAGTTGGTATCTATGG
GATGAATGTCATCGTCAAAAGCAGCTAAATACTACTATTTGGTGTGATTT
TACACGGGTTATTGGAAAAGACAATGGATTTTACTTTCGAGCTATTGGAA
TGAACTCTATTGATCACAACTTAGAAGAGATCTTCACACCTATATTACAC
AAAAATTCAGGGACATCTTGTTCTTGTTCAAATCTTAAACCTTTACTTCC
AACCGATGACTTAAAGTATAAGTTATTCACAGATGGTACTGTTATTACGG
AGATAAACAATACTTTGGACACTATTGATAAATCATTACTACGTTTCTCA
GTATCTTTATATTCTGGAGATAAGTTGCTACAAAGTGATTTGGAACTTGT
AGAGAAACCTAAGACATTCACATCAAGTTTGAAACTGGAAGGTCTAAAAC
GTTGTCAAATCTACAAGATAAGGTTTGCATTTGAATATGGACGCTGTAAA
GTTGATGCCAACCAAAGAGTATTCACTGATAAAGAATTCATATTCGATTT
AGACCATGACCCTAAAGCTCTAGATAACAAGCTTTGTGAAACGCAAGTTG
ATGGATCGGAAGACGAACACACTGGAGGACTTGTGGTGGAACATCAAATC
TATATTATAGTTTCGGTCAGTTTAATTCTTTTTGGATTATTTGGGTATCT
GGCATATTACGTTTGGCAGACAAAACGACGAAAGGACTTGGACAGTATAT
CTGTTGTTGGGAGAAGAATACCAGATGATTACCATGTACCACATCAACCA
GTAAACCATGAATATGCGTATGTCCAGAATCTCCAGCGAGAAACAAGCTT
CGATGAACCAGTTTATCAAAACAGCCTCGATGGACCAGTTTATCTAACAA
ACCTCGATGTACCAGTTTCTCAAACAAGCCTCGATGAACCAGTTTATCAA
ACGATATCTGAAATCAATTCTCCCATAGATGTTCCATTGGATAGGAATGT
TGGTGCTTAATATAAAGGTTTGTTAAGAACTGAGAGGAATCTGCTTAATT
TTGTAGATTTTCTTTATCTGTTTTGCTCCTAATCTTATCATATGATTCTT
GTTACAACGAAAGTCTGTTCTGTTCTGTTCTGTTTTTTGTTTCTAAAGTC
TTCCTATTTGAGAATTTAATAATAAAATACCCTCCCTTTACCCTTTTTTT
ATGGCAGCTTTCATTTTAACATTACTGCTTTGGGACCATTGAGTTCAAAG
TCCGAAAATCTATCGGGTATCGAAAAATGTACCACGATACCAAGATAAAG
AAAGTGCTGGTTTCAATCCGGCGTAACAAAATCAGCGGAAATCTTAAAGC
TTCACTTTTTCCTTCTTGAGAAAGGTTGAAAATTTTCGCTTTCGGCTTTA
AACTCGATGGTTGGGATCTAACCTTCTAACCTTTTTCGACTTTTTTATCG
CACTGAACGTTTTTGTGACGTACTTTTTTTACTGTTTTTTTAGTTGTTTT
TAACGTATTTTATTGTAGATTGATTTATTTTATTTTATATTTTGTTTTTG
TTTTCAATAACAGAACCTTACATGTTTTTTTGATAAGCAAGTGTATGCCC
CTTGGTGTCAGGCTCGAGTATGCTTAAGCTTTCAAAGCATCCAGACATAC
CACATGCTTGTTATATTCTTTTGATCCACCCAACCAAATTTGTTAATAAA
ATCTTAGAAATTTTGTTAACATTCGATTCAAAAAGCGTTTAAATTTTCGA
ACAGTGGAATGTCTTGTCGATCGTGGAATGTCTTTCTTTTACTTGACCAC
TTTCAAACCTTTTTGAACAGAAAAAGAATGATCACATGAAAAATATTTCA
GGCTGGCGTATATGCTTATTATGTTATGCTTAGGAAATCTGCAAATCTAA
GCCTTAATATGCTTATAAGCGTTATGCTTATAAAAAATACATGTATCTTG
AAATCACACGAATTTTCATGCCATTTTTTTAATCATAATATTTCACGTCA
AAAGAATGGTTTATGGCAAAGTAAATCATTTCGACTCTGTCAAATTAATT
CAATGCAAGAAGAAAACTTTTTGGCTTTTTGGCTATGTATTTCTTTAATT
ATGGGGATGGAGAAAAATGAAGTAGTCGCCCCCTCTAAAAAGAAAAGCTT
TATAGATGATCTACGTTTATTGATATGCCATGCTTTCTTGAGAATAATTT
AACGCAAATCGAGTTTAAATTGGATAGTATTCCTTTACTTAAGCCTTCGA
AGTTAGTAAAAAATTCGAAAAAGATGATGAATTTCCAAACGATGGAAATT
TCACTTTTGTGGGAATTACAAAACCCCGGAGAGAAATTACAAGTTCGCGG
GAAATTACAAATTAACGTAAGCAAAAACGTCAATCGAATTTCAATCAAGC
ATAAGATTATCTGATTAAGTTTCATTTCATTAAACTTATCCGTAATATTT
ATGGTATTTCTAAACGAATTTTGAAATTGATAGTATGACATGTGTAATAT
TATTTTGACAAACTATTTTCCGACCATTGTTTTGAATACTGTCTTTCCTG
AATTTTGCACCGTATCAAAAAAGTGATTGAAATTGAGAGCAGGATTGAGG
AAGTACATTTACGTTTTTGACGCANCACCGTATCAAAAAAGTGATTGGAA
TTGAGAACAGGATTGAGGAAATACATTTACATTTTTGACGCTATCTTAAA
AATATATTGATGAAATTTTTAGATTGTTAGATTATCATATATCAAAGAAT
ATAATACTATCATCATATTTTTAACCCATAGAGAAAATATTAATACATTT
TTAAAGCTTAGTATATATTTTATCTTTCCATGTACATGTACAGTATATGA
AAAAAAAAATGAATAGCTCATTTTGAAGCAAAGAAGCTGATCTAGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025859TCONS_00025859Clytia hemisphaericatranscript
TCONS_00025858TCONS_00025858Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025858-proteinTCONS_00025858-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000549supercontigsc0000549:164426..167622 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53	0.56	0.47	0.21	9.45	6.05	7.86	8.59	6.22	5.44	6.39	5.48	5.65	4.08	4.78	5.18	6.43	6.54	3.65	4.92	7.81	7.28	6.84	7.63	6.02	8.44	5.57	3.55	7.58	7.56