XLOC_014627 (gene) - C. hemisphaerica

Overview
NameXLOC_014627
Unique NameXLOC_014627
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000559:155406..160916+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014627 ID=XLOC_014627|Name=XLOC_014627|organism=Clytia hemisphaerica|type=gene|length=5511bp|location=Sequence derived from alignment at sc0000559:155406..160916+ (Clytia hemisphaerica)
agaaaataaaaacttgtTGAAAGAAAGACAGAACATTATATTACTGAATG
GTTCTTGATTGTTGAGAACTTCGGTTAAGTGATTGTGGTTAGCTGGAACT
TGAAATTACCAATATAATATTACAGTTTTGAAGGACGAATAAATTGGGGC
ATTTGAACCTTTAAACATTACAACCTACCTTCAAAATGGTCATCCAACCA
GATATACCAAACCAAGATCTTACAGATTGTGAGTATCGCCGTAAAGAGAC
TCAAATTCGTCAACAATTACTAGCAAACTTTTTACAAGCTATGCGTGAGG
ATTTAGCAGAATGGATCTCCAGTTTATCTGTTCGGTCAATTACACAAGAG
AACTTTTTATCTTCCCTTGAGAACGGTGTTATTTTGTGCCAACAAGCTCG
TTTGATTCAACGCTACGCTGAGGAATATAGCATCATCAATAAACCACACA
ATATGAAGATTCCTAACAGGGAAGTAACTTATACAGAAAAAGGAGCCTTT
AGAGGATCATTTATCTCAAGAGACAATGTCGCTAATTTTATCCAATGGTG
TCGAGGACTTGGTATTCCAGACGTTTGTTTATTTGAAAGTGAAGATTTAG
TTTTACATAAGAATGAGAAATCAGTCATTTTAACGTTATTGGACGTAGCT
AGGAAAGCATTTGTGTTTGGCGTGCAACCACCGGAGATTGTACGTTTTGA
ACAGGAGATAGATCAAGAGATAGAAGAGgataaacaaaatgaaaagaaag
ggAAACCTCCACCAAAACCTATTGATTTGGAAGAAGACAATAACCTGGAC
ACACTGGTGAGTTGGTTGTCACCTTTTTGAGTGATTTtagcacccctgtc
tcagcgACCCATTGAAAATCTTTCACAATAAGGAAAATAATTCTGTGTAG
TTTTTAGAATTCATGGTATTTTCGTACCAAGAACGAGCATTAGCAAATGC
TACTGGGCCTGTGACACGNGCTGGTGAGTTTGCCATCACCTTTTTGAGTG
ATTTTAACATACCCCTGTCTCAGCGACCCAATGAAAATCTTTCATAACAG
GAATATGAATTTTGTGTAGCGTTCCTATGGGATAAGAATCCTGGGTATTT
TCGCACCAATGGGTCATTGACAGgggttttatttcaaaataagaCGTTAA
CAAGTTTGTAAGATAAAAGTCATAATACGAGGCGCTTGTTCTTTTCTTTG
AATTAAGTTACGTCTCTAATAGACCTCAATAATCACATCTTCTGAATGTC
TCAGAAATGTCTATACCTTTTTACGAATAAAGTGTATTTGAAACATTAAA
ACTGAAGTCGTAGTGCTTCACATTCATAATATTTAGCAGAGCTACCCCTA
AAGGTCAATGATTTTTTCTTCAGGTTCGCAACATTGTCAACCGTTGCACT
TGTTATGATCGATTTCCAATCAAGAAGTTGTCGGAAGGAAAATATCAATT
CGGTGAACAAAAGACACTCATCTTCGTCAGGGTAAggttttttttaaagc
aaaaatccTTGGGCAGGCTGTCGGCGTCAACTAACAGATTTGTGCTCCTT
ATAGAttctacctggggttttgtagaagTCAGCGATTCATACTAGGGCAG
ATCCTCTTTATTGTTGCATATGGTAAAGGCGCTTCAAGGAAGACAATACA
TCCATATACCGATAAACAAAGCTCAGTTATTTTAGAGAATGCAGCGTAGA
GCCTAGATATTAACTAGTCCAAATTAGTCCAAGACACTAACACTCAAACT
TTTGCTGCAAACTACGAATAAACTCTTACCGTAAGTTGGtataatgtcga
cacccctcatGTAACTCCGATACCCTTCTTAGAGATAGGATTAaaaggaa
ggtcggaatcactgattgaaaaaaagatGTTTTCCTGTCTGACCGTTTAT
CAACGATCATCGATTCCGACCTTTTGATATTCCTAGGTTTAAAGAAGGGT
GTATCGGATTTAAATAGTggaatgtcgacattagaccaacttatggtaaT
ATGCTGGTCAAATTTCATCTATTATATACTATCGGGTAACATCCCTAATA
CCAATCTCTGTCTTCCCTAACAGGTCATGCGTAAGCACGTGATGGTTCGT
ATCGGAGGAGGTTGGGATACTTTTGAACATTACATCACAAAACACGACCC
TTGTAGGACCACTGTCGCAGGTTAGTACTCTTCGACTTTATGATAGTTTA
GTACATGAAAAATTACTTTGTTAGAGTAAGTCtcgtatcaatttttaaaa
ctcTAATTCTCGTCATCATACTGTAAGCttagttttcttttgttttactg
ATAGGCTTCTTTTGCAATgttttctgacattacatcacggatccaacagc
tgattggttgtaaatgacgtaaaatcagccaatacgtcactttcaaccaa
tcagctgctgggtccgtggaagacattgcaatggtgcatatcatgaattg
ggtCCTAATGGACACCTATTTGCGAATAATTATCAGACTTCTCGTCAGCT
GCATCCACCTTTTAGAATGATAGCTAATACGCTCTTAACCTTTCTTACAG
GTTCAATCGACAATAATGGCCAGAGCAGACAAACACAACCACCCGCCCGG
TGCACAAATCTTCTTAACAACAGCAGTAGCGGTGTAAGTCCCCGACGTAA
GAAGAGCGTACCGGACAAACGGGAGACACACCGAACACACGAATGTATGA
TTAGTACGACATCATCGGATACCTGGAGTATGTGTTCGGGAAGCAGTGAA
GGATCAGGAAGCACGGATGTAAGTTGTTGgtggttttctttttcttctaa
gCCGAAAATTACTACGATTTTTGTTGGTTCCATTTTTCGACACTTGTTGT
GTCCTTTTGTTCACTCATTTCACAGAAAACAGttgtaaaatttcttcatt
cCATATTTTCTTTAAACCCTTTTACGGTACTACGGTTCCTCATCACTCCA
AAATTGAATTCTATCTGTCAAAAATGACATCAACCAACAATGGGTGCCAG
TGAATGATTTTATCTCTATTTGAAAAACACTGAATATATTAATCTTTAAA
TTTCAGCTACAGTtgactttctctaattcaattttcaagttaTCAAGAAT
TTTGTaggaattagagaaagattcgaatagtagaggttcgaattaaagaa
agtttACTGTATTAGTAAAACGCGACCTTGGCTTTTTTATGAAATCTCTT
gaatgtttttcttgttttttttccagGGTCGTCCAAAACCATTTGGATCT
CGCAAAGAATCCATGATGAGTACCAGTAGCACAGAAACACCAGATACCTC
TCTACATTTCACCAAATCCATCGAAGAAATTGACCGAAGGTTACAAAGCA
TGGAAGACCGCAAACCGACCCTGGATATGACCATTAAGGACCCTTCCGTG
TACGAACATAGAGCAGACAGTTGGTTACGTCATCATTTAAATTCACTCAA
ACAGAATCGAAGGGCGAGTGACGCGGAAAATTTACAACCTATGGACGCTT
ATCAAATGAAGAGAGGCTacactgctgacgtcatcgaacGACGACCGAAA
GCTCAGAAAGAAAACACGAGGACACCTAAAATGGAACGAAGAagtgagtt
tttgttttttcctttttcggtTTTTTGTTGAGTGGTGTATCAATAAACCT
CTTACATCGTttcattttttccctttttctcaacgttcttttcttaaact
ttttgttaactcATTCCTTAACACATCTTTAAAACTCATCGAATTGGGTT
TTGCCAGGGTTAAAGTTCATCAAAAAACCTATATCGGTGAGCGCGTTTAT
GGAGTGACTTCGAATTGACCGTGGTAAATTTGAGTCcaatttattgtttt
ctttttagatCGAGCTGGTCAAGTCCGTGCACGTTCCGCTACCGGTACCA
ACACTCCTATCTCGAAATCCATCGATCAGGGGTTGAACCACGATCGGATT
TCCGCATACTCTCCCGCTTCAAACCCAACGCCGGACGGCTTCTTTTCATC
GGATACCCTCTCTGTTTCATCATCTACGAACTCTTTACAATCACTCGACA
GTCATCGCAAATCGTGCTCCGAAATCGCGACTCAAACCGACGACCTTTTC
TTATCACCCGACGGCTCCATTCCGTCAAATATTCCAGGTCCACTACGTAA
GAAATTAGCAACGGTTTTAGGATCGCCGTCGAAAATTCCACGTCCCGTCA
TGCAACGTTCGAAAACTATGGAACTCCCATCAGCGAAACTCAAGCGAAGA
AACTCAACTAATTCACATGACCGCGAACGATTGAATCAAAGAGCTCCCAG
AATGCAACGAGAGAAATCACAACCCAACTTTCGAAGAGAGAAATCGGATG
TAGGGCAATCATCGAAATATAAAATGGTACAATCACCTGGACCCAGACGA
AGAGGTGAGTGAAGAGTTTTCCCCTATAAATTTTCTAACTTTAACCAAAC
ATCCTGTACCCTGATGCAATGAAAGAGTTTTATTAAAACTAGACTAGTGA
CAAGCTGTGACAAGtggctttttaaaatttaagaatatctaGAAATAGGT
TTTTCCTTtatagcgcaccgcgctgaatctaaaaatagattttatttttg
acataatcattactctcgatgtgtttgtacgagttccaatcccatcaacc
tttgcgctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNaaaagtaataattatgacgtatgcga
tGCGGAGCGCTATTGAAACGTAAACACAGGGTACACTACGATCATATACT
ACAAAACACTCCTAAACATTAATATGGCCCCTCCTCTTCCGCTTTAACTT
GCTTACCAAGTATTGGAAGGTGTAGTCAAGTAAGACATGAAGCATTTAAT
CTCCTTCTTAACCTCtaatcaataatattttttcatttttcagagaGTAT
GAAGAAAGAGAAACCAGTTCGTGTTCGAAATGGCCCGGTTCTCACCACCC
AAGTATGATAGAAGGAGCAAGTGGCTGTTTGAAAGGGATTGAGTCGAATT
TCATAACGGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025992TCONS_00025992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025992-proteinTCONS_00025992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000559supercontigsc0000559:155406..160916 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24	0.2	0.06	0.06	49.24	38.78	52.93	56.23	15.61	27.95	15	10.2	12.36	11.98	6.82	7.04	11.44	12.72	15.67	22.51	8.01	8.35	6.76	11.45	14.88	19.53	11.24	14.58	13.96	12.7