XLOC_014694 (gene) - C. hemisphaerica

Overview
NameXLOC_014694
Unique NameXLOC_014694
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000563:13825..23234-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014694 ID=XLOC_014694|Name=XLOC_014694|organism=Clytia hemisphaerica|type=gene|length=9410bp|location=Sequence derived from alignment at sc0000563:13825..23234- (Clytia hemisphaerica)
CGTTTCCAAACAGACGAAAGTCATGAACATCGTATTGCACTCATTGGTAA
TTATTGCAGGATTTTATTTTTTACAAAATGATCCGAATTCTCAAAAATCC
TCCACAAGCTTGATAATTCCAGGTAAGTCCGTTTCTTTTTGTTATTTTTC
AAGGTCGACGATCTCAATTTTTTTCGGTATTTAAGAGTAAGTTGGTGCAG
ACCTTTTACTATAAGTTTTTAATCTTTAATCTTAATTACATAAATTCATT
TTTCTTTACCTCCATACGTTCTTTTATAAAAACAAAATATACAAGAACAT
ATAGACTGGGAATCCAGTCGTTTATAACGTTTTTGTTGAAAGCGGGAAAT
TTTTATGTCGGGATATGGTTAAAATAAACGACTGGGCTAAGGTGGTTTCC
GTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATGAGAATTTCTAAGTGAAAGAAAAAAAAACAAACCAAAACAAACCAA
CAAGACCCCCTGGAAATGTTTTCCAAAAACATGAAAAAAGAGAATTTTTA
TGAAAGGTTTTTTTGTGCACAAAATATTCTAGACGACTATATTGATGCTC
CTGTCAAGTTTTCTACTTCCTATTTTTTACTGAGTTAAGTCGTCTAGCAT
GCTAGACTAAAGAACATAAGGCTTTTGTGACCAAAGTATTAAGAACAAGT
TTAGAACAAAGCTTAAACTCAAAAAGTTAAGAACATTCGAAGGTTTAAAA
AAAAACTTGGATGTTCTTATAAAAAAAACATATAATGTCAACAATGACTG
TAATCGTATTTTTTCAGGGGCGAATGCAGAACCCATTGCACCGGCCATTC
CATTCATCGTAGGAGCTGGCGCTCGCTTCGCTATAAGACACTTCGCTAAA
CACATAGCAAGGCGAGCTGGAAGGCGAGGTGCCATATTGGCAGCGAAGAA
TGGCGGAGCAGAGCATACAAAGGGGAAAAGAAAGTCAACCAAAGGAAAAC
ATCAGAAAGGTCAAGTGAGGAAGAATAGAGATTGAAACAGAGCGCTCGAA
AAAAAACAAAAGGGTGGTAAAGATGGAAGTAGGAGATCAAACCGTCGAAT
GTTTGGAAAAAGACGCAGAATCAGACGAACAAAAATAAGACGCACGAAAA
GCAGACGCGCAAGGAGCAGACGCGCAAGGAGCCGACGCAGTCAAAAAGGC
AGGAGGAGCAGAATCAAGCAGGGCAGACGAAGTAGAAGTAGACGCACAAG
GAAGAGACGCAGCCGAACAGGCAGAAGAAATAGAAGAACAAATCGCCGAT
TGTCAGGGAGAGGAAACCGAAAAAACCGACGGAGTGGAAACCGAAGAAGC
GGTAGAGGCTGGTTTAAAAAACGATGAAATATTAAAATCCCAAAATGAGT
TTTTTTACTTTGTGTTATAAACTTCTGTTTTTTTAGGGTAGAGACTAGCT
TTTGATGTGAACAATGTTCGGGCTGACTAAGATATTTGAGGCATGTTTTT
AACCGTATTCTTTAAAGATCTCTGGCCCTTCGGAAGAGATAATAAAAAAA
ATATTAGCAATTTCAATCCGGTAATTTTATTTTGCTTTTTTAAATTTTGT
TGTAGTAAAGCATTTCTTAGGGGGTATTTTCTACAGAATGTATTTTTTGT
GAAAAATTGCATTTTTTTTCGAACGAAAAAATAAAAAAAACATATTATAC
TAGAAAAGTTCCACGTCTTTTATAAGGATGGTGATTTTCATTTCATCATG
GATATTCGGCATATACTAAAAGACGGATCGACGGATCAACGGATCGACGG
ATTACTAAAACACGAATCGTCGTACTTTAAATTACTAAAACACGGATCGT
CGTATTTCGGATTACTAAAAGACGGATCGTCGTATTTCGGATTACTAAAA
GACGGAACGTCGTATTTCGGATTACTAAATCACGGATCGTCCTCGTGTGA
AGAAATTCCTCGTGTGCTAGGTTCCTCCTTCTTCTTCTTAAAATTTTTGA
AAATAGTTGCAGTGACCTGGTAGTGTGAAATTGTCGATTGTTGAAGAAAA
TATGTAAGGCATACACTGACTATTTTCATCGTTTGCTACGTTTGCTGAAT
TTTCAATCTAATGTAGCAAGAATGGGCTCTTGGGTCAATGTTAGTTAAAT
ATATAGAAATCTTGTCATTGCTGTTGTTTTTCTCGATTTTGGACTTTGAT
GATGATTATATAACTTTCACGTTTTAAGCACGTTTACACACATCTCTTTT
CCTGTTATCTTTTTATTCTTTGACATAATGCAATAAAGTCCAATAAAAAA
AGAAGACTTTTTTAATCACATGGTAATTACAGCTTTAATTACATTCGATA
ATTTGGGAGTTGAATTATATCCATAATGCACAAATTTGACATTCTCAAAG
GTAAAAAGAGTATAAAATTTCTTGCTTTACGATTTTGTTGTTACTTCCTT
TGAATGTTATCTAATAAAGGACGAAATAAAATAAAACATATAGTTTTATC
CGGGGTGGGGGGGGCACCTAGGCAAAACGACCGACGGGTATGTGCGGACC
CGCAAATTTTTTTCCGTACATGGACGAGAGTATCTCATCTTGACGGTCGG
GAGTATCATCGACGGNAGGGGGGGGGCACCCAGGCAAAACGACCGACGGG
TATGTGCGGACCCGCAAATTTATTTCCGTACATTGACGGGAGTATCTCAT
CTTGACGGTCGGGAGTATCACATCTTGACGGTCAGGAGTATCATCGACGG
GCGGGAGTATCTTAAACTTATCTTAAACCTTGGAATATCGACCCGACCGG
GGTTCGAACCCACCAACTGAAAGAATTTCTTATCAGAAACCCAGCGCACT
ATCCGTTGAGCCACACTCGCACAGCAGAATACAAAATTTGGAAATACTTA
TAGAATGACAAAAAAGACGGGGGTAATGTTATTATGATATGGGTAAAATT
GCCCCTTTTTTTAACCTGACTGAAATTCGAGCCGTTACTAGCAACCCTGC
GGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTA
GCAACCCTGACCTGACCAAACAACAAAACCAAACAACAAAAATGAGATAT
TCCCGACCGTCGATGATACTCCTGTCCATGTACGGAAAAAAAATTTGCTG
CGGACCCTAAGGGTGTGTTTTTCGAAATAACCAAAATGCACTGTAAGGGT
GTGTTTTTTTCTCAATGCACTGTAAGGGTACAAATTTCAAGTTCTAATGG
TCGTTCAGATTGAATTCTACTGTTTCTACTTCAAAGTACATTTCAATTTT
TGATTTTTTTTTGCCTGCGGCGCAAATCTTTCTTTTCGGAAAATTCAAAA
GCTTATTTTTCTGTTAATATGCCAATCAAGAGAGTCATTTTGAGTCAAAT
TAGAAGGGTTTTAGCTAGTCTAAGAAGTTATATTTTATAAAATTTTTCTA
GTCGGACCCAACCATGGTGTCGATGGTGGGTCCTCCTGATTAATTCAAAT
GATATTGCACACTATTTCAGACTATAGCTTTCTATTTAAAAAAAAATACG
ACGATCTGTGTTTTATTAATCCGAAATACGACGATCCGTGCTTTAGTAAT
CCGAGATACGACGATCTGTGTTTTAGTAATTTAAAATACGGCGATCCGTC
TTTTAGTAATCCGAAATACCACGATCCGTGTTTTAGTAATCCGAAATACG
ACGATCCGTGTTTTAGTAATCCGTCGATCCGTTGATCCGTCGATCCGTCG
ATCCGTCTTTTAGTATATGCCTGGATATTCTCGTATTCTCAACTTTTTGG
GGAAAATCATCCTGAAATATCCTTACTGTATTCCTTAGGCTAGGATCCAA
ACACAGCATCAATCTAACATCTGATACATAGGGAATACATACATCAAGCT
AAGATTTGGTATATTTGTGAAACACTTTAGCAATACTGGTAAATTGCTCT
AAAGTTTGCGTTCTTGGTTTCAGTTGCCAAAATCTATGATGTCGATATTC
TTAACATATTGTTAATTTTTTGGCTAATTTCATCATGAATATCAAGCAGA
TATTCAATAGATAAAAGTTTGTTATTGAAAGCAAAATTTGTAAAAAGAAT
CTACCCTGGTATAATAGCCGTGGTGTATCAGAAATTATTCAATGACTGTT
TGTGCTTACAGCTATATGATATTCTTATATTATATAAAAGAAAAAGCGTT
AATGTTGTTAGTAATGATCAGAAAAAACTAGAGGTTTATCCTATACGTTG
CCGATAACAAATCCAATCAAAAGCTCTGGGGGAGGCTATTTAAATAAAAA
GGCCTCATTGAAAGGTAAATCTTTCGATATCCCATGACAAAATAACAATC
AAAACAACCATTATCATAATGACTTATAATAAATGAGAGTTTTAAGATTT
CATATGGAGCAATGTAAGGGTAGTGGAATTCACAAAATATGGAGGATTTC
CTACTTTTGGTTTCGCCTGGACTTCACTTGTAAAAGTATTTTTGACTGAT
ACAGCACATCGAAGCGTCGAATCAGTTGAAAGAGATATAAAGAGATATGT
CGGACCAAGGGAAATCATATGCATGTTTAGGCGTTTTCTATAATTACGAT
GAACAATTAAGGACAGTACTTTTAAGTATATGCTCTGAAAAAAACAGAAA
ATACCCAGGCGAAGAAGCGCCTTTTATCACTGGAAGCTTAAAAGAAGGGT
CTTTGTTAGTACCTTTGATGATAAAAGTCGAAAATAAAGATTATGATTTG
GATATGATGATGGTTTTTGAAAACCTCCCCGAGGATCGGTCACGTAATAT
GATGATGGAAACAGAATATCCTGGTTACTACCTCCTCAATGTTGACGATG
ACCAGACATCGAGAGATTTTGATGAAAAGTCAATTTCCTTCCTCAAAGGT
GAATGCTCAATCAAAGATGTTCGTAATAGTGGAAATAAATTTATAGATGT
TTTCGAGTTTAAAAAAGGGTGTCCCTCAGTAACTGGGCGTTTATCTGATA
ATGCCAGTGAATTACATCCAGACCAAGAAATCGACGAATCGGTTATCAAT
CATCCCTTGGTGCAAGTGGTGAGCCATATGATGGTGGATTTGGTATTGAG
CTTACAAATCAACTTCTGGCCAGAAATAACAGCAGAATGGTTCACAAGAG
ATCGATATTGGCCGGATCCACGGACTATATGTGAAATTCGTGAAGTGGGA
TGTTGTTTAGTTCGAAAGGCGATCGGAAGTGAAGAACGATCGTGGAGATT
ATCTTTTTCTGAAGCTGAAATTATCTTGGCAAGTAAGCAAACTTGTTTTC
AAAAGATGAGCTACTTATTGGCCAAGGTAATTTTCACTTTGGAAACCCAT
GCTCTTTTTGATGGAGAAAAAGATAAGAAATTATCTTCGTATCTCCTTAA
AACTGTTTATCTTTTCACAATAGAAGAAACACAACCAGAAGAATTTGAGA
AACTTGAACAATCTCGAGATTATTTAGAATTTGTATCAATGATGTTCGAA
AGGTTATCACAAGCCTTTAGAGCTGGTTATCTGCCATGTTATTTCTCAAA
GGAAATAAACCTATTACACGGCTTTGATAGAAATTTCCTAAATGACGTTG
CTTATCGATTCGATAATACTTTTCAGCTGGAACTTGACATTTTAATCAAA
AAACTTGTTCAGAATTTCAAGGAGAGCCGACTTTACAAGATTTTTTCGGC
AGAACCCATTCAGATAACACCCTGAACTATTTTAAAAATATTGTTTTTTG
TTTTTTTCATTACTATAATGTATGAAATGGGGATGATTTTGATAGCTCCT
GAATTGGACTTTTCCAGAAAATAACTGTTGAGGAGATCCATTTCCGCTCC
AAGGGGATAAGGATTGATATGTAGGGGAATTCCATAGGGATATACAAAAT
GTTGTCAAAAAATAACAGGAATTCCATGGGGGTAACTTTTAAAAATCTTA
CTAAAATTTAAAATTCTAGAGTTTTAAACTAAATTTGCCTGGAATTCCAT
GGGGTTACAGTATTTCCAGCAACAAAACTTTGGACCTCCTCAACAGGGGT
ATACATTTTTTCTTCGGATAAGCTCATTGAGCATTCAAAAGTNGACCTCC
TCAACAGGGGGTGTACAGTTTTTCTTCGGATAAGCTCATTGAGCATTCAA
AAATTTAGTTCACATAATCTAGCAGATACAATTTTCTGTAAAAGTAATAC
TATTTTTTCAGTATTTAAAGAATTACCTCTCAAATTAGAATTTTTAGGGC
AAAATAGACCATATTATGAACAAAAGATTCCCTCAACCGCTAAATTAAAT
TCAGCGAAACTTTTTTCTATTAAGTATATAAGCTTTTTTTTTTCATAAAA
ATATAATTTATAAGAATATTAGTTATGAAATTAGGCAAAAAATATGTCGT
TCTTTATTGTCGTTTTTTCGTTTTTTGTCGTAATTTGTCGTTTTTATTCG
TTGCTCGTTTTTTCTTCGTTATTTCATAGTGTCTTTATGGTGGTCTCATT
TTGGCACTTACACTCCCTCTAAACATGTCTATTTTCAACTTTTCAACTTT
TGAAGTTTTTCAAATAGTTTCAACCAACAATTTTACAAAATTAACTTCAA
CAATCAACACACACTTTTCACAGCTTTCAACTTTGGCTCACCTGGTAGGT
TCATGTTTGTTTTTGTGTGTCAGCCATTTTGTTTTGCTTTTTTAGGTGTG
TCTTAGGTTAAAGTTAGGAATTTCTCACTCATTTTTCTCATCATGTTTTG
ACTTAACTTTACTTTAGACTTAGATTTCCTTTCACAAATTCTATTTATTC
AGACTTAAATTCCTTTCATGTATTTTAATTTCAATTAGCCTTAAATTCAT
TTGTCAATTAAGACTTAGTCATTTTTTCATTTTTTTTTTTTCAATTATTT
GAACATAAGTTATTTTACATCTTCAGTTTGAACAATACCAATATCAATAT
CATCGATCCGTTACAAATTCGAGTTAACTTTACTCTGTGTGTACTACAAT
TCGTTTGTCAATTCTAGTTTGAATTTCCTTACGGACGGTGCATTACAACA
TTGGTTTCCAAACCGTTCCAAGTATCAATGCTTCTCCAGTAAAGTGAACT
CGTTTGGCATCCTCTAATGCCGTCTTCAGAAAAATTATTTTTTTAATTCG
AGATTGATTGTGCTTACGTTGAGGTCGATTTCGAATAACGAGTTTCTGAG
ATGCTTATATACTTCCATCATATCCCCGATTTTACGCCGGTCTTAAGACA
GAGTAGGTTCATGACTTATTGACGTTCTTCGTATGAATGGTTTCCATAAC
CACCGACAAGCCTTGTGGCCCTGCGTTGAACACTTTCAATTGCATTAGAG
TGTTTTATCAGCCGTGGAGACCAAACTGCTTGCGTGTACTCAAGGTGAGA
TCTCACAAATACAATGAAAAGTGTGCGAAGTATCTCGGGAGAAAGGAAGT
CGGAAGTCGAAGCTTCTGTTAATCAAACCAACGATTGATTAAGCCTTCTT
GATCTTGGTGTAGATGTGCTCTTCGAGATTTAATTCACTTTCGATGATCA
CTCCGAGACCCCTCTCTTGATCGACATTCGACATGTTCTAGGACAAAGTG
AAGTTATAGGTCATAGAAAGGCTTCCATTGGAGTTAAAGACCAGCAAAAA
ATGGGTGTTTTTTGACTCCAGCGAGCAGCCTATTTTTAGAGGCTGTAACC
TTCAATGGAAGAAATTCCAGAAGATTTTCCAGCCTCCTCGTTTATTCGAA
ACCCCCGTTTATTTGGAACCTAATAGTTCGTGTCATGCGTGAAGTATCAG
AATCTACTCAGAGAGTACTCTCTACCCTGGAAAAGAACATTAACTTAGAT
GTTTAAGTCTTGAAAAGCGCCTGAGCTCATGATGGTAGAAAGAATTTACC
TTTAAAAAAGTACTTTTCAAAATAGAATTCCCCTAATGAATATTAATTCC
GAAAAGCACATTTGGGGTGATGTGACATAATTTTATTGTCACATGATGCA
AGTCTTTAACCATGGTAACCTCATAACACTGTATTAAGGAATCCCCCCTT
TAAGAAAATTTATGCTGACTATTAAAAAGCTTTAGCATTCTATATAGTAA
ATCACAAATAGGTTTTGATTTAAATGAATGTTTATCATGCTTTAGCTTTT
AATAATTTAAATTTTGTGATGTTATAGTAACCCTCTATGTTTTGAAGAGA
ATCTTACTATACTAAAGACTGTTTGTTTTGTCAATTGGCAAATTCCCTAT
GGAAAGTATAGTACAGTTTCCAAAATAAATGTTCTTAGCTCGCCTATATA
TAAAGGATAAATATCTAGTGGTAGTTAAAGCTGAAAGCATCTACAAAGTT
AGTAGAAAGGTTAAAGAAGAATAAATTTGAAACAGGAGCAGTCATGAACG
TAATATTGTCGTTGTTAGTAGTTATCGCAGGATTTTATTTTTTCCAAGAT
GATCTGAATTCTCAAACATCCTCCACAAACTTGATAATTCCAGGTGAGGT
TGTGTTTCAAAGTCTAACGTTTTAAACCGTTCCATGGTAGCCCATGGAAC
TTTGTCGATGATTCTTACTTTTGGATACGTCCCTTCTTAACAGATCTTAC
ATCTTTCTAATTACAATAATATGAATTGCTACCTGAAGATTGATATCACC
AATGATGACGTAACCTAATTAATCATACCTTTTCCCCTCTCTTTTAGGTG
CACAAGCTTTTGCTCCTGCAGTCCCGATCTTAGTTGGAGCTGGCGCTCGC
TTAGCTGCTAGACAGATTGGCAAGCATGTAGCGAAGCGAGCGGCAAAACA
AGCTATGATAATGGCAGCCAAAAATGGAGGCGCCGAGCATACAAAAGGTA
AACGAAAATCAACCGAAGGAAAACACGAGAAAGGTCAAGCAAGGAAGAAT
AAAGATCAAGGAAGAGCTAATGGAAAGAAACAGAAGGGAGCTAAAGATGG
GAGTAAAAAAAGCAAGAAAGCGAATCGTAGAAGATAAACTGAGATATGGC
CATCCAACAATTAAGCACAAAATACAAGCCACTGTTGACTATTGTACATA
ATGTAATGATAAATAAAATATTGATTTAACGCACCAATGCACATCAAATT
TTAATCTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026141TCONS_00026141Clytia hemisphaericatranscript
TCONS_00026140TCONS_00026140Clytia hemisphaericatranscript
TCONS_00026139TCONS_00026139Clytia hemisphaericatranscript
TCONS_00026138TCONS_00026138Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026139-proteinTCONS_00026139-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:13825..23234 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0	0	0	0.17	0	0.56	0.89	2.77	2.68	10.84	5.58	64.08	57.71	15.04	8.51	1.21	3.8	64.77	64.86	6.56	5.31	2.36	47.14	18.59	34.31	7.74	4.47	0.98	1.08