XLOC_015269 (gene) - C. hemisphaerica

Overview
NameXLOC_015269
Unique NameXLOC_015269
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000608:103189..111779+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015269 ID=XLOC_015269|Name=XLOC_015269|organism=Clytia hemisphaerica|type=gene|length=8591bp|location=Sequence derived from alignment at sc0000608:103189..111779+ (Clytia hemisphaerica)
ATCCTGTCTTACAAAATACTGACAAGGAAATGCCTCTAAGGGACTGGGTT CTAGTATCTGAAAGGACCATTTAAAAGGatgtaatttgaatttttgtatg ATTCCTACATTGTATGAGGTGACAAAACACAAAACCGAGCGACATTTACT AGCTCACGAATAACATTTACTAGCTTACGAGTAACATTTGCTAGCTTACG AGTAACATTTGCTAGCTCACGAGTAATATTTACTAGCTCGCAAGTGACAT TTCGATCATGAGAAGTTTGGCGTTCCTTTTGGTTACCACCGTCATTGGTC AAATTTGCGCAGGTATGTTGTTTATCTGATATTTCGATGGATGATTGGCG CAcaccatggcgttctaaatctacagGCCTAGCAAGCGTGCAATGTATCg ccttcaaatattttcagaaaattgagcCCCCGCAAATTCGAAGTCAAATT CGCTGCACGCTTGCAAGGCCTGCAGATTTAGAATGTCATGGCgcacgccc acgctaaagctctaaggGAACAGGCAAATTTCCTATCGGAAAGTAATGAT AGTCAGCCTTTGATGTGCAGCATCTACAATCGGACTCGATGACCCTTGCA CGTAggcctgaaaatattttcgttgGACCCGACAATCCCCGAAAACGTGG ACTCGATCTTTGCTGCTCTTAGCGTCATTCAAGAAATTGCGTCGTTCTTC TGTCTCACTGTAGCCTGTAAATATAATGGAAATCCCAGAGGAAGCCAGGG AAACTTGGGATAAGAGCCATTCGCAGTTGCACAGTACTTCTGCCTATGCT TACACATGTATGGCTTAATCTTTGAGACAGCATATGACTACTGGCAAAGT CAACCAGGTATGCTTCAAAGTTTCTGAAAGACAGGCTTGTTAGCTCGATC ATTTggaattaaatttgaattttcgttTTAGAACGATGTTTAGAAGACAT TTGCAAGTACAAGCAACCATGTATCACGCCAAACACAATCAGATGTGAAA AGCAGCCATTCTGGAGATACGAATGTGTCTGCAAGCCTGGTTTCTATGGT GTAAGATGTGAAACAGGTAAGTGCACTTCGAAAGAGtggacaattttttt attttcctattCGTCTTTCCTATCTCGtcgtctgttttcaaattttttat tttcttctacGTCAATTTTCTTATTCGTAAAAAGTACTTGATCTCATTCC TTTTTCATTCGTCGTCATTTTCTCCATAGTACCttttttcctttaaataa ctctttctttttttttgctttcgtTCTCGTCTTCCTATTTTATGTAAGCT GACctcaatctcgtacccagggTCACTCccaccactttttgattttaccc TGATAGATCGTGAGCACTATTATAAAAAAGCGTCAAGGGGCAAATTTCAG CTGACATCTTTATATTTGCTCGACATCACTTGTTTTTCTCTGCAtttata tagttttttaagtcgattttgatttttttgcatacTTCTCCATAGTTACT TTCATCATTCATACTCGATCTTTCCCATGTCTTCATCCAAATctgtcaac tctctctaattcgaacctctactatcCATTTCTTANTTCCAAACctgtca actctctctaattcgaacctctactatcCATTTCTTACAATATTTCGAAC TAAAATGGGCTGTTTCATTAAAAATCCATAAAGGGGAGTGGACTAACCTT TTcacgtcaaaaataaaatctttgaaatgtGTGAatacccctggaaaatg gcaaaattttctgaaaaactcctttgaagtgagggtggacgaagtAAATC AGTCTGAAACCCCCTGGAAGTTTTAAGACAAGTTCTTAcaccctggaaaa atgaaaaaccactcctttagaccccctggaaattttcgtCCACCCCCCCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccc ccccactctattttatgtatataaaatggaatggtccAATATTGGTTCCC TCAGCTGAAAATAGTatagaatatttttgaatattcgaatctttctctta ttcgaaaacaattcttggtcccttgaaaatcgagcTAGCGAAAGTCAACT ATTCtaaacattttctttatttttcttttggcgTCTTAATCACTGAAGGT TATGTTATTTCCAGGtgttattgggcttttccagaaaattttttattaac cccactgttgaggatattgatttttcgaagtatcgaaccccatGGATATC CTACTtaattagtaaagaccccctggatatccactcttaaagaTATGCtt aacccctggatatcctctcttataaagatgcttacccctggatatcgtat ttttttacttgaaaagacactttaccccctggatatccgctcccttgtag atatttaaacCCCTGGATAtactctcttataaagatgcttacccctggat atcgtatttttttacttgaaaagacactttaccccctggatatccgctcc cttgtagatatttaaccccctggttATCCACTTTTGAACGAAAGTCgtta acccctggatatccgatatcctcaacaggggagacacggactatttctgg aaaagcccatttcccTATTGTCGCTTTTTTTCTTATGTTTCAATTGGTTT ATGGAATACTGCTTTCTAATTGTAGAGTTTATATTTCATGAGATATTTTT CTCTCCGTCTATTTATCCTTGCCTTCGGTTTCGTCCTCAACTTCTAGgtc ttcttctttattttatttctccCTATTATAATCTTCAACTTTGGACTGAA CTTTGGCTAACTGAACAAAAATATCCTGTTTCTTGTTTTGTGGGAATACG TTCCACAGTTTTTACTACTCTTATGGTTTTGTTAATAGATCGCTAAGTTc gaacgttttttttatttatcagaATCTGGCAACTGCAAAAACATCAAATG TCCAAGTGGAACCAACTGTAATGCTGGAACTGAAAAATACATTTGCCAGT GTAAGAAAGGCTTTACTGGTGAATTCTGCCAAAACAACATTGATGATTGC AAAGGAGTTCGCTGTCAAAACGGAGGAACCTGCAAAGATGGAATCGCCTC TTTCACTTGTCAATGCAGAAACGGATTCAATGGAGAATTCTGCCAAAACA ACATTGATGATTGCCAAGGTGTCAAATGCCTCAATGGAGGAACCTGCAAA GATGGCATTGCTTCTTTTAGCTGTAAATGCAAAACTGGATTCACAGGAAA ATTTTGCCGAACAAATATTGATGATTGCAAAGGAATTAGATGCCAAAACG GAGGAATCTGCAAAGATGGAATCGCCTCTTTCACCTGCCAATGTAAACGA GGATTCAATGGAAAATTATGTCAATTCAACATTGATGATTGTCAAGGTGT TACTTGCCGAAACGGTGGAGCCTGCAAAGATGGAATCAACGCATTCACTT GTCAATGTAGATCTGGATTCTATGGACGATTTTgtgaaaataaagatttc tGCAGAGGTGTCAGATGTCAAAATGGAGGAACCTGCAAAGAGGGAGTCGC TTCTTTCACTTGTCAATGCAAAAACGGATACAATGGAAAATTCTGCGAAA ACAACATTGATGATTGCCAAGGTGTCAGATGTCACAATGGAGGAACCTGC AAAGATGGAATCAACGCATTCACTTGTCAATGTAGATCTGGTTTCTATGG GCGACTCTGTCAAAATAGAGATTTCTGCAGAGGTGTCACCTGTCGAAACG GAGGTACATGCAGGAATGGGTTGACCTCCTTTTTCTGTGAATGTAAAACC GGGTTCAATGGAAGAGTCTGTGAAAACAACATTGATGATTGCCGAGTTAT TACTTGTCAAAATGGAGGAACCTGCGAAGATGGAATCGCCTCTTTCAACT GTAAATGTAAATCTGGATTTACAGGAAAATTTTGCCAAACAAATATTGAC GAGTGTGAAGGAGTCAGATGCCAAAATGGAGGAATCTGCAAAGATGGCAT CAACACATTCACTTGCCAATGTAAATATGGTTTCTCTGGAAAATTCTGTC AAACTCGGAAGGATGTTTGCAAAGATAACCGTTGTTTAAATGGAGCAACC TGTACCGACACTGTCGACTCTTTTAAATGCATTTGCAGCAAAGGTTTTAC AGGAAGGTTTTGCCAGACAAACATCGATGATTGTCAAGGTGTCACTTGTC AAAACGGGGGAACTTGCAAAGATGGAACTGCTTCTTTCACTTGTGAatgt aaaaatgattttttcgggagattttgtcaatttaaaAGGAATTTTTGTGA TGGCGTAACTTGTCAAAATGGAGGAACCTGCACAGACGGAATTGATACTT TCACATGTCAATGCAAACGTGGATTCAATGGAAAGTTCTGTCAAAACAAC ATTGATGATTGTCAAGGTGTTACTTGCCAGAATGGAGGAACCTGCGAAGA CGGAATTGCTTCTTTCATTTGTCAATGCAAAAACGGATTCAACAGAAAAT TCTGCCAAAATAACATTGATGATTGCCGAGGTGTTACTTGCCAAAATGGA GGAACTTGCGAAGATGGAATTGCTTCCTTCGCTTGCAAATGCAAGAATGG ATTCAATGGAAAATTCTGTCAAAATAACATTGATGATTGCCGAGGTGTTA ATTGCCAAAATGGAGGAACCTGCAAAGATGGAATCGCTTCTTTCACTTGT CAATGCAAGCCTGGATTCTCTGGAAAGTTCTGCGAAAGTAAGTCATTATA TTTCATACTGAATTTACTGATCCATAAACCTTTAACTAGGGTTACTTTTC ACTTCCCATGATTGTGTTTCTTCTTGAAACGATAGAGTCATCACAGGCTA TAGTGAAAGTTTAAGCTCTCTATAGAAGGGGGGACTCGACTTTTGAGGGT CATTTTTTCATTTGCATTCTGTCAGTTTTGGACCGGAGGAATCGGTTTTA TGTAACAACAGCCATATAAACGTTTCAATTTAGTTATAGACTCGCCCTAA TGATTGTGGAAATTGGTGCAAATTAAGACTTTGATATCTTGATACGAGGG GCTTCCAAGAATCCAGTATTGAAGATATTCTGATATTGAGAGGGTTGGGA GGCCGAATTTCTGGAATTTGGGTACTCGTTGAAACTTTTTTAAGCTGGTA TTTGGGAAATTTTGGCCTAATTTTTGGCCGTCGCTggtatttcataaaaa aatggcGGTATCCCTGTATTTTGAAACGTTGGAAGCCCCTCCCCAATTGA TAAATGTGTGGTGTGACTCAACTTTACAAGTTAATCccatagaggttttt catgttttattaaATTACGTAATtttcgccattatggaagcaaacgttcg aatctgtagaggtGATCCCTTACgtaaatcgaacgtttgcttccataatg gcgaaagttaaaacaaaataaaacaaaataaaacatgaaaaaacctCCAT ATCTCAATAAGTAGGTATTGTGTATTGTGCATCAAATTTacattcttttt gttttagtttcttcatgttCTCCGAATCCATGTCAAAATAATGCGAAATG TATGGAGCATGGTGGAGCTTTCAGTTGTTGGTGTAATCAAGGATATGAAG GAAAATTATGTGAAATCAATGTTAAAAGTAGGTCGTTTTTTAACACAAAA AGAACATAattcacgcttttttataagtacgcccaaaattttcgaaaccg TTAGAAGTTCTTAACTTTTGGNattcacgcttttttataagaacgcccaa aattttcgaaacctTTAGAAGTTCTTAACTCTTGGAGTTTTCAGTCTAGA AAATGTttctaattttacttttttgaatttttgtttcctAAAAATTCGGT GTTATAGAGTCTgcgaaaccttaaaatgttttaaatttgttaATGATGTT TCTATCATCGAATCTTCGTGTTCTTTTGAAAAGGAACGTGTGGTCCAGAA TAATAGGTATCAGAGTCCAAACATCCAAAACAGGTGGAATACGGTTTCTC TACTTCTATtttatataccttatcggccaaaacttagttgtCCTTAATtc tagtcggccttaattattagtagGCCCTAATTTTATCACCTCGTCACCTC ATTCAGTCAACTAAgagccgactaataattaagaccggactaaaaatttg ggccatttctaaatttacaagcagatggaaaataggagaaagcttaaaat actggaaaataaggaaagcttaattattaacttttaatttggcccaatcT TTTAGTccgccctaattttagtcaccaagccaatatttagtcacttaggg ccgactaagttttggccaatAATGTATAAGATTTGAAGATTAAAGGTGCT TAACGACTatactattttttcattttatcagaATGCAACTACCACTGTAG CAGCTGGCGTGGATATTGCCGTATCATGGCAACCGACGGCCGTATCTATA GCAACCATTGTCAATTCGAGCGTGCGCAATGCAGAAACAATTCACTAAGA ATCAGGAAGAAAATCTGTGGCTTTTATTGAGCCAGTAAATGCAAGCAAAG ATAGCAAGAATTTTTCAGACTTAAagagataatcagatggtttaaGATTT TGGCCTGTAGTAACCTTCTACGGTCCTGAGtaatttaatgggataaattt ttgcggggattaaatttcgcggttgagctcatccgcgaaattttaagatt tcacggggattaattttcgcggatgagggatttcctgatttttcgcgggg atttaatttcgcagattggggtacaaattaaattttttgaaaagggtcaa aacattgaaataaaatttttccaggaaaattaagaatttttttttcaagt aataagagagtgttttggaatagggcgaggagatatgtattacaactatc caaagttgaatttgaacttccatggtgcggagctaatttttcacagccta tttgggaaaaaagcggaagagaaattcgggataagaaaattaaattgaaa attaattagTTTTAGTTTCTCATGTCAATTTAATTTCAAGCCNAAAAAGC GGAAGAGAAATTCGggataagaaaattaaattgaaaattaattagTTTTA GTTTCTCGTGTCAAtttaatttcaagccagttggattaccctcttgcatt gaaaagcttttaaacaatacctcttccaagtttgtaaatttgtgaagaaa attttgaggaaaacgattttttgctaaaaagcatATCGTGGATTTGACCT CTTTCGAGGGTTGCGTgccctcatgtagaaaaaaaaataaacaacgataa aaatagaaatttcgcggattgcaaaaaaaattcaaatttttcgcggaaac tatctttcgcggatgggcctttttcaaatttccaatgggacttattttcg cggatgacacccaaatccgcgaaatccgcgaaaattaatccccgcgaaaa tttatcccattaaagtaaaacCTCCAAGTATTTTggtctaaatattttca aaagtcgagaTATCACAATTCAAAATTACCGAAAATGGTTACACGGTTCT TTCATGGTAATTCttactaaaagtaaaaaaacttgtaactaaagtctatt cacgataagtgtgcactcttttttcatttacctataacttttgaaggaat tcttcaatctttataaatttggtatcattggaaagatattNNNNNNNNNN NNNNNNNNNNNNNNNNNNNcgactaagttttggccaatAATGTATAAGAT TTGAAGATTAAAGGTGCTTAACGACTatactattttttcattttatcaga ATGCAACTACCACTGTAGCAGCTGGCGTGGATATTGCCGTATCATGGCAA CAGACGGCCGTATTTATAGCAACCATTGTCAATTCGAGCGTGCGCAATGC AGAAACAATTCACTAAGAATCAGGAAGAAAATTTGTGGCTTTTATTGAGC CAGTAAATGCAAGCAAAGATAGCAAGAATTTTTCagacttaaagggataa tcagatggtttgagatatttggcctgTAGCAACCTTCTACGATTCTGAGT AAAACCTCCAAGTATTTTGGTCTAAATATTTTCTAAAGTCGAGATATCAC AATTCAAAATTACTGAAAATGGTTACACGGTTCTTTCATGGTAATTCtta ctaaaagtaaaaaaacttgtaactaATATATCTCTTAGGAAGATAGTTAG gcgaaaatattttgaggttttgttCTTGGAAATAGAACttgcaaaatatc tcaaaccatctgattatccctttaagaatttaattaatttttgacgAAAT ATAATCCAAATGAGACTACAATGTATACACCTCTTGGAACTACTGtagct tttgacttgaaatttctACTTGTGGTTATTGACCATCTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027161TCONS_00027161Clytia hemisphaericatranscript
TCONS_00027162TCONS_00027162Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027161-proteinTCONS_00027161-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000608supercontigsc0000608:103189..111779 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.13 0.1 0.16 1.08 0.37 0.55 0.48 0.51 0.79 0.03 0.28 0.28 0.12 122.81 14.48 0.05 0.07 0.1 0.09 0.15 0.09 0.15 0.13 0.1 0.17 0.12 0.06 0.11 0.17