XLOC_015785 (gene) - C. hemisphaerica

Overview
NameXLOC_015785
Unique NameXLOC_015785
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000657:91074..101372+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015785 ID=XLOC_015785|Name=XLOC_015785|organism=Clytia hemisphaerica|type=gene|length=10299bp|location=Sequence derived from alignment at sc0000657:91074..101372+ (Clytia hemisphaerica)
TAGCGGACACGGTATCAAGACGATGTTTCGCAAATCAAACATGGGAAAAA GTGAATTATAACCTACACTGTCGCAAATTGCCTTCTGAATTGGTGACTAA ACATAAACAAGAAATGTTGTTACAGTATGGACTCTATACGCAAGAGGTAG GTCGGTGTAGGGTGGTACCAACTTCGTCCCCTCAGTTGTTATAATTCTCG GGTGGTTCATTTGTCAAAGTTGAGTtagaatacactcttctcgagatgca taaatttattgttgtcctcgttttcaaacagatttcattgctataaaatt acatattcacaatgataattgtgttgtttacacctcatgagacattttga atttcaacagtggcggcctggcagggggtgcagggtgtgcagtgcaccac ccagaaacacctgagaggggcgctaaaaaagcttttcaagggggcgccaa aaatctttttgatgtttggttgggctattttgcgccctttgacacgtttt tagcgccttctataagtgcaatgtaaattttttttcgcttgcggcgcttc gttttattttacgaattttttcaaaactactctCAACATTGAGttgcgaa aagtcaaagcaagagaagtgttgtgtatccaccaggggttaaagaggatg ctcaccccaaaaatgagagattgatcgaaactgctcgctGTGGTTTTTGT GGTCTTATGTGGACTAACTTTCTCCTTTTTAGAATATCttataagctgtt tgacctttcttacaccaaatttttttgcctgcggcgccagaaTTACAAAC AACCCTTATTCTtgccaactttcgaatttttggggcctctttcagccatt caTCTTTAGTGGAGAGTAAAGTATGaccaggaaataacaaggaaatagat atcaaatTATCACCCGGGGGGTaatagggttgcgagctgacggggggggg NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgagctgacggggggggg tgccgcccgactttcgaactttggacccttaccgggactaaaaaggagaa aacaaaggaaaattttgggaattttgcgAACCTTAACGGGACAAatatga ccaattttgaccaatttcgatctttcagggggtaaaaagttgaaattttc ctatttttccgacccttagtgggactgaaatttgattttcttatttttcc aacccttagcgggactttggaagtcgaaaaaaggtacccttacccTTAAT GGcagcacataccgtaccctccatttgcctaagtaccccccccccgggca ttaccaccaccttcgtataaataaaactttgttaaCACAGAGATTctggg cgttactttcaaccagtcactgctgtTACAGTTTAACAGTTTCACTTAAT GGtatagggcgcaaataaggacaaaaataccaggggcgccaatttcatag tttgcaccaccaagaaaattaagccaggccgctactgaatttcaagtact tttgttttagagttaatgtttgcctttgggaatttaaattggtttaaatg tataatttcatagcaatgaaatctgtttgaaaacgaggacaacaataaat ttatgcatctcgagaagagtgtattaaagAATTCATGTNCAGTTGTTATA ATTCTCGGGTGGTTCATTTGTCAAAGTTGAGTTAGAATTAAAGAATTCAT GTGTGTTTATATCTTTCTGTATCGGGTCTAtatttaaagtctatttcaaa ttagctggcagttttttttcaaacctcaataactttcgatagaatttgaa ttactAGGCGGTTTTGtactcgttaaaaagataatccgaagtgaaatatt aacaaaaaagaaataaaattaaaaaatggaaaaatgaacgTTCGACAGAG TGAACGgatatttttctgaaagagccCAGTTTAAAAATGTTTGCAGTTTG TTATATATAAACTCTTTGATCGTTTAGGAGATCGATGCTGAGAATGAATT AATTCGTCATACAAAGCTACAAACAGATATCAAGTATTATTTGAGATGCT TTGATTTGTCTATATGTGCTATTGGCTTTTTGGTCCTTCTGGTATTCATG TAAGTTtgattaaaagttttatttttacattgtgttcccgtttcatttca gacacatatttcatatcagggaagtgtctgcctattgttatattatgctg atataagcaagaagttgcttttcttttcctctttctgaccaatcttgctc cacatccgtgtcaatccaatgtgaaaaagcttgtgaattgaaattgatga gtaagcaaacgatatcgctctttttcaaaaacaaaaccttgaaGTTAATT TTTGCTAGGATTCAAAACCTCGAATGTCCCGACAGCAAGATTCGCgggaa agatattttaaagcAAATCATATGAACTATGAACTATGAACTATCATGTG GCTGATATTTTTATATTCTCTTTGGATGAACGAATCATCGAGGTATCACT TTCAAAACCTCAGATCAAAAATTTCTTCTGCCAAGCCTTCCGCTGCaaat aaataaacttttaaaccctaggaaaataaaagaaattgggTGAAGAAAAG GcggattcgcgaaattttgtccatgCGAAATCAGAACATCCTATTAGTGT CCCCACAGTTGGGCTTcacatgttttgatttttgacgtTTTGGGTCAAAA TTCTAATAATCTGTAATCTGTAATAATATGTATCTACAACCTCGGTTAAA agatattgagaattttgattaatctctcgtttttagcaatttaaagttcg ggcgagaaagttgcttttgggctaattgataaatataatagaatatttca atttgggaggggtttatagacttacaggctatattctaagccctattgga ccattcttgaacttttggattctCAGATCCTTAAGTCTTGTGTTAAAACT GTACCCTTTCAACCAAAGTTAGggcacttccaaatcgtttgtggctataa gatttcgtgggaatttcctttTTCTCTCAAATATTATAACTTTCATTGAA GCTAGAACTAATACGAAAAGCAATTTTTATCGATTAATAATTTAACTAAT TTCAGACCTTGGGACAATTCAAGAATTATGCTCCATCggaatttgattat ttcattCTTATTCGATGACCTTATCAATATTCTGATTCAAGAAACATTCA AGAATCCAAACACAGTGGTGAGCTGGGATATTAATTACCAATGCATAGTT TTTCGAAACCCTGATCTGGCTAAAAAGTTGTGTGTACCAGGTGGGAGATG ATATGGATATGGGTTTGTTCAGACGGACCTCTAAACTCTGACTTTTCTGC CATCGTCAAAcctaatttatttaaaaagataCGACTCACCAGAAAACTAT TGTTTCACCGCAGGGTTTCCGGATTTCGAAGTTTAGCTTGAAATTTCTAA CCCGTACCGGCCTTACCCTTCTAGTCACATTGTACAGAAGATCAATTCGC CAGTTACACCAAATAAAAAGCAGGGTTAAGTACATGAGAGTCTCAAGAGA AAAATACAACATTATCTCCCTCCATCTTGAAAATAGATTCCGATTGAAAT TGTCAATTGATTTTGACTAACTTTTCCAATATCTAGTAACAGGACTCAAG CCTTCTATCTGGTCTTTATACTACAAGACCAACCCGGCGGGGGTGgtgca ctcgatctgaaaactaCTGAAAACAACAAACTAGGGTCTCAAAATTGAGC CCCTTACAGTGCACAGAAAGTGCCGGTAGCTTACCTTGAGTGTCCCTCTC CCTGGGCTGACCAAACATCGTAAATTGTTTTCTTGTTTGTACCTTTTTAG AAAGAATGCAGTATTTTGATGGTGgttcaaaagtttttctttctaGCGCA AATTTGTTGGATGTTCAATGAAGGATTTTTCCAGTTTCGACAattcttct ttgtttttattgagaAGACTTATTTATGGATATACCTGTTGTTCGGTTGG GGTgagtaaaggccggtctccacttgcgtgcTCTGCgttcgcactttttc gagcaaagctaccacgctattggtcaaaagaaaaatgaagcaattccatt ggcgcgctcgaaaaaaaaggttgaaatgtgttcaacttttttttcgagcg cgcgctacatttttatgacgttatcttttttccaagcagagaagattgaa gccaaaacatgcgattgcagcgcgcgcaagtggggAGTGGCCTTAAAGTC GATTTTTGCTCAACAagtgttttttatctttttgttaGTAATTATCCTCT GTAGTtagttttttttccatttattaATTATTATTGGTTAGCTTATTTGG GATTCtttcctcctggcggtatgatctggtggtcctttgGCGGGAGGTTA GGAACCTTTAGCgttgtactatttgttcgtgttactATAGATAAAGAAAA GTTCTTCATCCCAAGTGGAACGTTGTTGTATTTATTTGGATGCTTTTTGA CGTACAGCtggctctctctaattcgatcttcaagggaccataaactttct tcgaattatagaaagattcaacTTATAGAAAGTAATATGTACCACTCTCC AGATGAGGGGAACGATGTTTaggttcgaattatggaaagattcgaataat agaagttcgaattagagaggatTGACTGAATTTGGAAACTTTTGGCGAAG AAGATACACAGTCTCAAAATGTTTTACCATGTTTCTTTGTAGGATTTCCA TTGATTTGGACGTTTGGCATCTATTTTCCAATCCTTTGGACGTACCCACC ATTAGATGACTTTGCTGTGTAAGTTTTTTTGAATCCGGAATAAACAAATT TCCTACACGCCACACAAACTAACCGACTTTATAAGTTGATAGAAGCCTGT AGTTTAACGGAAATCTTTATAAGCACATCAGTCCGCACACCACGCACCAA CGACTTTTTAAGTTGATCAAATACTTTTTTGACGACCAAATTATCAAagg tttcaaaatcaaaacatgcgCATACATCAATTATGCGCTGCTCTACAGTG AAGACAACGGGACATTTAcattaaaaagcaaaattatatttctcatgaaa ttatttcaaattgtcCCATGTATATATGTATATTTCAACATATATATACC GTCTAGTGGTTTAACTTGAATCGCCATTCTAAGAAAATTAGCGTGTAATC CTAACCTTCTTGTCTTGTCAAACACAAAAAGATATTATTGCTCCTTTCTT GGTTCTTGTAGGTGCTGGTATGCTTTTCCAGGATATAAATACAATTACAT CATTTATTCACCAGCTTTCGTACTTTTATTGGTAAGTTATTATCAGATAC CCCTGTGTCACCAACCCGGTGGGacccccactggaaaattcgaCCATGAA GGGTTTGGCTAATTTTTTTCCCTGtaggaaaaataccctacaattcaATC CCCCTGGAAATTTGACTTTGATTAtccatccccattcgaaattaaATTGA TCTATAAACCCTATTGGATTCTTGAGTTTGGAACAAAATAATTTCCATCC AAATTGGGATTTTGATGGAAACTTTTATGTCCCCGCTGTGGGAATaaaag cgagtttatgtatgtgtgtttttcagcgacggagacggtaaggttctaat ttgagtagatcctgaccagctgaggacgacggcaAATCAGCACTTTTCAG CACAAATCAGCAcagtcctcgattttgcggggcggaattgcgggtttttc caaatcgcttcagtcactctaccgtcctcaaaagtgcttTAAGCATATAT ATCCATTGGGTTAGGAGTGGTAattcaataataatttttttttcttttca gttaAATATTGGAATTATGGCATATCTCATGTGGATGATATGGTCCAAAT TAAAAGCTTCAAAAACTGGTGATCTCAAAACAGCAAGGTTTGCTTACAAA CAACGTTTTATGGACGttttatggacgttgtgaacattagataaacgtta aaacaacgttctGTGTCAGCTTGTTTTTTAATCTTGACTGATATGTAAAG TATATGATAAATATTGTTAAATTGATAAATATTCTAAAAACCCTAACAAA GTTTCCAAGGTTTTTAAGTAATTAAAATTAAACGAATTACAGGAGTTAGT TCATCTAATCTTTCCATCAGCTtacccaaatagagacttatacgcatgcg taatttatcgttcttttaACTACATTCATTTAATTCCCATGATAAACAAA GAAGAATGAATCGGTAGTGGGTGGTATagtccattgagtttcaagccgaa ggctagaggtcaatctccttggtaggatttgaagccaacaaatcctacca aagttgcgcggccttgagcgatcCGCCTGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CGTCataaaaaatacggcgcatattttaaggcttcaatttttcttgcctg agaaaggttagagattgacctctagcccttcgggcttgaaactcaatggt ataGTCTCTTGcagtcggggttgtggacggcgacatatgtcgttctttga tagttagggttaaggtttgtcgttcttttgtcactttttaatagttattt gttgtattttttaGATGGGCTGGTCTCACAGGGTCATTACAGTGGACAGA CTGttcattctttaattttttactttctttataGGAAAGCAGCTCGTGGA TTTTTCATTTGTATGTTTTTGCTTGGTGGTGGTTATGTGTTCACACTGTA TGGCCCTGCTAACAACATTGGATTTATGTACTTTAGAGCTATCGTACAAG CCACTCAGGTAAGGGTATTGCTTTCTGGGCGTGTGATGATACACTCCCTc ttcacagacccggtaggatcttttcagccagtaggggtaaaaataacgga ctggaACTCAATTGGGattaatattcttattttttttttaattcagtggg gatgagaaAATAACATACTATTTTGtggtgaggattggtttatttcatTA CTTTCAGTGGAAACAAAAATTAGAGGATAGCTTTCCACctgggacaatat tttggccgatttttccagtgggaaggagtCCCAGTGGGTCCGTAAGAAGG GGGCAGGGGTGTATATATGTCTAAAAGCTTACTAGGGAACAAATTTATGT CGCATAATTACCACAAACAACATGATACTAGATGGGAAATTcttccagct ggcacacaaagcCAGTCTAAACCTcttcttagtattttggccatcgaaac cttacgtttttatataatttgctCTAATAATGTACCTGAAATAATATAAA GCTATCCTTAATTAACCCatgtacgtttttttataagaacatccaaattt tttaagcctgtggatgttcttaacttttttagttttaagcctaaaaatgt tcttaacatgttcttattttaattataatttttgagcatttttgtctatt ttcctaagaaatcaggtgttttagagtctgcaaagccttaaaatgttctt aacttgttcttaacattttggccatcgaagccttatgttcttatatagtt tgttcttataaaaaaatcttactTTCCTGTTAGGGCATCATGGTTTGCAT CTTGCATGTGTTTTTAAGCAAGGAAGTACAAGAAGCTGTCAAAACGAAAA TCAATCGATTTTTAGCACAACACAATGTAAAGTTTGTTTTCTCGAGTAAA TTCCCAGGTATATGAGGCCCCCAGCGGatcttcaattcacgcaatcacgc aaaaatctttcttaaattcacgcattcacgcaatttgtttttaattttca cgcattcacgcaaaccgctgggggggggcttTATGCCAATATTAGAGCCt cgtaaacaaagatttgttatAAAATATGTCCATATAAATCGACAGTCTAT AACCGGGCTCTTTTTGTCGTGTTACTTTTATACcgtataaattttatttt aattaacTAATTTCATAGGATTTGTGCATCTGGGAGCAGCCAACGGCTAG AAATTACAAATTATCTGTTCTTAATGATAACTTTTCCTGGAAAAAAATGT GGAAAATTCTAAATGGCGTCACTGGCATAAGGGATCAGAATTGTAATTTG GACCGTgctgaaaatggaaaaaaattgagcTTTGGCGTAACAAGGGCCAG CATAAAAAGGGCGGGTAAGGTAGGCTAATTTTATCTACGGATCAAACACA TTGGTTTATTTTACTAGATTGAACTACAATGTatgaacaagaaaaaaaac tcaaatggaCCTTCAACAAAACACTCAAACGTCAACTCCACCTCAAATAT CAACAACAAGTATTCACCAAAGACAAATAAAGCAAACAAGATATCACCAG AGACAAAACTCTCCCCGCCTACACCTCCACCGCCCGATATGCGCCCTAAC ACCCAAGCTCCACCCAAGCCACGTGAAAATCCCTGTTATTCACACAGCTT TAcgttggaaatcaaaaattgtttgacgCCCTCTTGTTTTACGCCTCGTG GCGGGAAGAAACAAGGAGGTTCCGCCTTAAAGGAAACAGTGAAAATCTCT GGTGATACTATAAATGGTTTAGTAAATGAAGCAtttgaaaaggaagaaaa caCTGTTTAATGGtgcccagttggcacacaacgacgttgtttcaacgttt atctaacgttcaaaacgtccatatagcgttagatgaacgttgaaagaacg ttgtgtgccagatgGGTGGTCGGAGCTTTGGAATCACCAACATTGTGGTT AATATTGATTGTTTGGACACTAACAGTATAGTATGCAAATTAAAAAGTAT TTAGAGGACATCTTATTTTGTTGATGTGATGCTTTTATTCATTAATATAG TACTTAACCAACCAAAATCAGGAGCGTAATATGATTGTTGAAGTAGTGAG ATTCCGAGAGAGGacatcttaaaggttttatttttacgtaTTAAgttttc ccgtttcatatcagacacatgtttcatatcaggagagtgtctgcctattg ttattttgtgctgatataaacaaaaaagtgtttttcttttcctctttctg accaatcttgcttcacatccgtgtcaatgcaatgcgaaaaagcttgtaaa ttaaaattgataagtTTTGAGTGAAcgataaaacctttaagaaagaTTCT CTAACGTGATTGGATAGTTATTTCGTTAAGGTTACGGTAGTTGTCAACCT TCATAATAGAGGACCAAATTTTCACCTTGCAATTTATAAAAGTGCAGACT AATTTCAATGTGTTAATATGAAACAATATCAGTCAGATGTCTGATGAGAC TCTATTTCTTTAACTGTTCGTGCAAAGAGAACCCTATTTCTATCCACCGA AGCCTGggtgattgaaaaatttcagaaTGTACCTATTTGTTTacacaaaa tttccaccctcTGGTTATTTGGATGAACAAGAATCAGAATATCTCATTTA AAGTACCTGAGCTTTTCGTAATTCCTTAGCTACCCTATGTTTACATTTCG TCATTTTTGAAAGAGATGCCATCATGATTGTCTAATGATCCTAACAAGAT TGAGCTGATTACCATGATACAGCTATAATTAAAACctacacgttttcttt ataaaaacaaactatataagaacataaggcttcaatggaagaaatattaa gaacatggtAAGAACATTTTGTTAGGAAAGAAATActcaaaaacttaaga acatcataaggcttcaaaatttttagatgttcttataaaaaaatatgaac tCAATCCTTCAAGAAAATCCCTTCAAAAGATAACGGCTCCCAAAACGAGT GATTCCAgcgaaaatatgaaaaattagcTAAGCCAAGAATACTGGGCACA ACCGTGGACAACTTATCATGGACTTTTGGAACCAAGTATGAAACCTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027917TCONS_00027917Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027917-proteinTCONS_00027917-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000657supercontigsc0000657:91074..101372 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
VIPR1vasoactive intestinal polypeptide receptor 1 isoform 1 precursor Homo Sapiens
CRHR2corticotropin-releasing factor receptor 2 isoform 2 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.98 0.98 0.86 0.83 0.1 0.05 5.18 5.88 9.86 8.43 6.42 8.75 0.13 0.07 0.19 0.23 0.1 0.19 0.03 0.1 0.35 0.35 0.25 0.35 0.54 0.53 0.36 0.21 0.29 0.29