XLOC_015990 (gene) - C. hemisphaerica

Overview
NameXLOC_015990
Unique NameXLOC_015990
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000671:67655..73497+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015990 ID=XLOC_015990|Name=XLOC_015990|organism=Clytia hemisphaerica|type=gene|length=5843bp|location=Sequence derived from alignment at sc0000671:67655..73497+ (Clytia hemisphaerica)
CAAAATCGAAGGAGAGCAGCAGTAAGAAACGCAAGAGAAAGGTTGTGGTT GAATCGTCAGATGAGGAGTCCAGCAGCAGTAATAGTAGCGTGGAAAGTGA AAGGGGAGAAATCGAGTCGTCGTCGTCGGAAGAGGCCGAGGTGAAAAGAA AAAGcaagaaaagaaagaagcatGATGGGGGACGTGGTAAGACTACACTT TCTTTGGTCTATAGTGTGGCACCCGCTGTGAAAAAGAAGCTTCTCCAGGG GAAATATGTTCCNGTCTATAGTGTGGCACCCGCTGTGAAAAAGAAGCTTC TCCAGGGGAAATATGTTTTGTATAAACTACTTCCTGGTTTTGAATCACGG GACGAAACCGCCCACGTAATTAGTGAAGATGGTGCCTTAAAATTGAATGT TGGGGATGGGACCAAGGAAAGACGTTTGGGTAAACAAAAACTAGATCTGG CACAGATGATTTTGGCTTTGCAAAAGTTTAAAGACTTGGTTGTTTGTGAT TTTCCGAATAAGGCTGCAGACATCGATAAGTACATTTCCAACATTGTTTT GATTGCCACAAAATATAGTGGTCTAGCTTATTGGTTTTATCACGTTTATT TTTGGGACAAGGCAGCTGAGATGTCTGACAGGGGGGAAGTTTTAAACTGG TCGGCCTTGGATTCGGAGGCCTTGCACGCAGCGATTGCGAACGCGTCAGC TAACTTGTGCGAGCATTGCCAGTCATTCTACCATCCATCTGGGAAGTGTC CGTTCAACCTGAGGGTCGATTCAGTCCAGGCAATGTCGTCAAGGGTAAGT GTCTTAGATACGGTCGATTCGGTTGATCTCGATAGGGAAAGGGGGAAGGC ATACTATAGAGGTAAGCGCATTTGNTGTCGTCAAGGGTAAGTGTCTTAGA TACGGTCGATTCGGTTGATCTCGATAGGGAAAGGGGGAAGGCATACTATA GAGGTAAGCGCATTTGCAATCGTTTTAATTTTTCTGCATGTAATTTGAAA AGCTGTGAGTTTCTTCATATATGTAGGTTTTGTAACGTTAATGGTCATGG CATAAGGAAGTGCCCTGACGCTTCTTCAAGAAAATGACTCTCTCCAGGTA CAGTTTCTTCTCCAATTAATGTCACTAACTTATCAGAGGAATTGAGGAAT CATCCGGAAAGAGAGTTTGTTGAATTTTTACTACAGGGGTTTACAGAAGG TTTTGAAATCGGTTATCATGGTCCAGACATGCATAGAATATCTCGTAACC TAAGGTCAGCAGACGCAAATCCAGACGTCGTAGATAAGTATCTTAGTGAG GAGGTTCAAAAGGGTAGGATTATGGGGCCTTTTAACTCTTTGCCACTTGA AAACCTTCAATGTCAACCGATTGGGATAGTTCCCAAGAAGCAACCAGGCA AGTTTAGAACCATAATGGATCTCTCCTACCCTGATGGTTCATCCATTAAT GACTTCATTGACAAAGAAGAATTCTCCCTTAAATACGTCACAATTGATAA GGCTATTGAGTTTATTCAGTTTTTAGGCCAAGGCTGCTTTCTAAGTAAGG TCGACATAGAAGGAGCTTTTAGAATCATCCCAGTCTCACCGAACGATTTT AATCTCTTAGGGATTTGCTGGAGGGACAGGTTTTATTACGATACAAGACT TTCTATGGGAGGAAGATCCAGCCCCGGCTTATTTGATAAGTTTGCATGTG CCTTGGAGTGGATAGCTGTTAACAACTATAAACTGAGTCATACTTGCCAC CTTCTTGACGACTTCCTTACTGCTGAGGCACCTTCAGAAAAGGGAAAGGG TTTAGAGAGGCTGTTGTATTTCTTCGACAAGTTGAATGTTCCAGTGGCTA GTCACAAAGTAGAAGGTCCTAGTCAGAAATTGGAATTCTTGGGCATAACA TTGGATACAGTAGCATTAGAGGCTTCTTTGTCAGAGGAGAAGATATCAAA GCTTAAAAATGAGATTGACGAGTTTCTTTCCAAGAAGAAATGTACCAAAA GAGAACTACTCAGCTTGATAGGGTCGCTTAGCTTTGATTGCAAGATTGTC GTGCCAGGAAGGGTTTTCTTGCACCGCTTGATCACGTTAAGCTGTACAGT AAAAAGATTGGACCACAAGATATACATCAATTTACCAGCTAGAGAGGACC TTTATATGTGGCAAGAGTTCTTACGAGATTGGAATGGGAGGCAATTTTTC TTAGATAACGATGTAAGTAAATCTTTCGATATGGAGTTTTACACAGATGC GTCAAGTACGGTAGGATATGGTGGTTGTTTTGGGAAGCACTGGTTCTGTG ATATGTGGGAAGAGGAAAAGATTAATCAGTTAGGCGTTTTTATGTCGGCG AGAGAATTGTTTCCGATTTTGATTGCAGCACATTTGTGGGGAGGTGAGTG GTCTAGGAAAAGGATTTAGGTATTTTGCGACAATGAAGGCACTGTGGCAG TCATTAATAAGGGTTATACAAGTGAGAAACTAATGGCAAAAATGTTGAGA AGACTGACTTTAATCAGTATGTCAAAGAATTTTTCTATAAAGGCAGTACA TATTCCAGGGTACAAAAATGTCAAGGCTGATCTGTTATCTCGTTTACAGC TGAAGAAGTTCCGAGAATTGTTTCCAGAAATGGACGAACATCCGACAGTG GTGCCCGTAGACGTGAAAAGTTGGATTTGGCAATAGAGAAGTACAATTCG GACGCTTTAGCCAAAGGGACGAAAACCACGTACAGTCAAGGAGTCAAAGC ATACAAGAAGTTTGAAGCCTACATCCAAGTCAACGAAGAAAATGCCTCTC CCCCTGACCTCAATAGGATTTTATTATTTGTCGCTTATCTTGCTTATCAT CGTAAGCTTTCTTATAGGTGTATTCATACTTACATGTGCAGTGTCAGAAA CTGGGTGATGAAGGCAGGAGGTCGAGATCCCTTACAATCGAAGAGGAGTC ATCAGGACAGGTTTAAGCTCAAGCAACTGTTAGCTGGCGTGAAGCGCGCA ACGAGAAAAAAGCGTAATACCAAGAAACCACTTAGAAGGAATCATATAGT CAAGAttacgaaaaaactaaattccaCTTGCCTTTTAGACCACAATAGCA AAGTCATGTTCAAAGCTGCGTTGCTGCTTgcctttttcggattttttagG TGCAGCGAATATACCCGCACAAGTTCTAACAATGACTCGTTTTTGCGTCG GAAAGATGTAAAGGTAAAGCGTAACCAAATGAAAATAATTCTGCGAAAAA CCAAGACCAACCAGTTTGAAAGTTCCGTTGTGAAAATATACGGAAACGGG ACCGAAATTTGCCCTGTACAAGCTATGAAACAATATCTAGATATCTCTAA CCACAGACGATCGTCGTCTTTGTTTTGGAAGGACAATAAGCCTTTGAAAA GtgtcacttttaacaaaattttgaaGGATTTACTGAAGGCAATCGGGTTA AACGTATCACATTATTCTTCTCATTCTTTGAGAGCTGGAGCAGCCACTAC AGCTGCCAATCGTGGCATTCCCTCTTGGTTGATCCAAAAGTTAGGAAGGT GGCATTCGAGCTGCTACAAGATATACATTAGAAACCctgaaaaatcctta aaattggCTCAGCTGTCTATGTCCAAATAGGGTCGGTTTTTACTTTAATA GGCTagcattgtttttgtttatatttaatCATACTCAAAATTCGGAGCTT cgctttaattttattttttgtgtgtTGTTTTTTCAATGTCCTTGGCCAGG GCATCAggttttcatttcttccttacAGACCTCGTAATGACAACTAGTAC TTGGGAATTGTCCATGCGTCTCACTTTATCTTGATTACATGCGAGACTTA TGTTACTTTacatctgttttttttttctttcgttaaagcctgattgttct tatcttttcctttttttttagtCTATTGCACTGTACAtaactattttttt ttactaGGATAtcgtgtttgtttgttttattttgaaataggTCTATATCT GTTTGTTTTGTTGGGTTTTCCCCGGCATTTATATTGATTTACACTAGCTT TTTCTAATTTGAGTTTAAAATATCATTTCACATAACTATTATAGACTGAA GTGTCTCTGTCAGTCGGCTGACAAAGGTAGATTTGGAGTAATACAAAGTA GGATCATTGAAGGGCATTGATTAGNNNNNNNTTTGagtttaaaatattat ttcacATAACTATTATAGACTGAAGTGTCTCTGTCAGTCGGCTGACAAAG GTAGATTTGGAGTAATACAAAGTAGGATCATTAAAGGGCATTGATTAGAT GACTTGAATAGCCTGTTATAACAAGACTGTAAAGTTATAAACGGCTCATG CTGCGGATCAGGGGCAAGTTTAATATAGTTTTTCATGGCCTTTGATAGAT TTAGGTTTAATATAAAATCGgtatataaaataataattagttTTCTATTA CGTATTCTTTTGCtacaaaattttccaagaaagagtatgtttaCATTGAG TCATTATCACACGTAGAGCATCAGTTGTATAGATAGCTGGTCAAGACTTG GGAAGAAGGCAAGAAAATTTAAGTTATGAAGAAAGATATTTGGTACCCCT CAATTAGCTAGCATGTTATAGAATGGGCAAGGATGGAGTGAACTGTAAAG GACGTACTACCAATAACAAGTTTTTTCATAATTACTAATGGCTAGAATTG ATAGCAATGAGCAACTTTGGGTATCCAAATAATCCGTTTTCCCTTTCAAT AAAGGGCTTGTAATTGTAGTTGTGATAGATTCTCCTACCGGAACGGCTGT ACGGCTAGGAGTCTCTCAGCAGCGAGGATGTTAGTGTAAATGTTCGTAGT GCATGTTGTGAGGATCCAGACCGGCTGTCTGGGCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGATCAGATTCGGAACAAAGT CCGGCTCCTTCCCGGCTGGTGGCGGATCTCTCTTAAGTTTCAGTATGCAC AAGGTTGTGATAGATTCTCTTGCCGGACCGGCTGTACGGACAGGAGTTTC TCAGCTGCGAGCATGATACAGTAGGGAAACTGTCCATAGCGTTGATTTAG GCTTTGTGTTTTCCATTTCATACAGCAAGAGATTTTGTCCCACACGAATT ACGCGCGATGGACAGTTTCCTGTAGCTATTAGGCTGTGCACGGTGATGAG GGGCCAGGCCTTGAGTCTGGGCAACCCGGCTGGTTGCGAAACCCCGCCGA TTCTGGGTTTATTCATCGTTTAGGAAGTCGGATCAGGTACATAGTCCGGC ACCTACCCGGCTGATGGTGGACTTCCTGTCGGGTGCACATTGTTGTTTTA CCTTTCTTTGTGTGATGTAGGCGTAAAATAGTTGAAATAATTCAATATGT TATAACATATCAGCTTTCGTTTATATTTAGTTATCTTATGTTGTTAGTAT ATACTTTTATTGGCTTATCTAATTTACTCATAGAAAATTTGTACGTAGGC CCGTCTTCCTGCAACCTTTCAGGCGCGACGAAGTATAATTTGGGGATACC TTCGGTTGGGAAATATTTTATCCCCAAAATTATTTGTATAGGAGTGGTTA GCCAAATAACAAACGCCAAAACTTATACACTGGTTTCCCTTATCGTTCAC CCACTTCTGGGCTTTCCGTTCTGCTCACAGCGTCTTTTCCAGtagtaaaa aatagaaagttaaaatgtcactttaattgaatcgaaatgatatacagact ttatgttatgattctctatcactgactctttttacaaagcattgatgact ttttgtaagttgtgttttcaacgacgggaataaaaatatcgac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028236TCONS_00028236Clytia hemisphaericatranscript
TCONS_00028237TCONS_00028237Clytia hemisphaericatranscript
TCONS_00028238TCONS_00028238Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028237-proteinTCONS_00028237-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000671supercontigsc0000671:67655..73497 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44 0.54 0.7 0.77 0.64 0.39 2.08 2.56 0.84 0.91 2.24 1.04 2.17 2.16 1.85 2.49 3.05 3.29 0.48 0.71 2.54 2.55 0.75 0.85 0.94 1.28 1.7 1.07 0.61 0.63