XLOC_016173 (gene) - C. hemisphaerica

Overview
NameXLOC_016173
Unique NameXLOC_016173
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000690:824..5756-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016173 ID=XLOC_016173|Name=XLOC_016173|organism=Clytia hemisphaerica|type=gene|length=4933bp|location=Sequence derived from alignment at sc0000690:824..5756- (Clytia hemisphaerica)
GTTTAAAACTCAGCCTCCTAAATATTTGGGGTAGGTAAAATATGTACAAA GAAATTCATACTTTTCCAACCCGGCAAATCTTTAAGAGAAGCAAACAATA GAATATAATTACCCTTTCCAAATAAACCTCTTCGGTGGCGAGCATAGTCT ACTCTGACGTAATTGTAAAATTTATGTGATGGGAGTTTGAGATAGTAATG TAATGTTGTTTGGGGAATTTTATTGCATAAATTATTCCCTTAATGTCCGA CTATAAAGCGAGATAGAACGCGCAGCTAACTTCAGTTCAAAACGCGAAAG CAACAGGGCGGCATTAGCTGCGAGAAAATCAAAACAATTTCTTTTAGAAG TAACTCTCGTCGTGGAAGGATCAAAAACAAGACACTGCAAGTACAAAAGA TAAGTTTACTAATTATTTTTTCTTCTATTTTAGCCTAACTAATAAAACAT GGAGGATAACTCAGTTCCTGATAATGCAACTCTTTTACAAATGTTTGAAA CCATGAAGTCTGAAATGTCGAAACTCAAACAAAACAACTCTCAACAAAGA ATTAACCTCTCTCCCCCAGCAAGTGATAATGATCTTGAAGATTTTGATTA TGATTATGATGATGTAGAATTATACGCATCACAAGATGAAATTGATTTAA TAGACCCAGTTGAGGAAAATGGGGGAGAGGAAGAAGAAGTAGAATATGAA TCTACTGAACAACCTTCTTCTTTAACTGTTGCTACTGCCACAGATGCAGC TACTGCAAGTACCAGCCCCAAAAATAAAAATGATGAAATTGGAGAGGATA TATTTTCAGAAATTAAAGTAACTAATTCGAGTGATTCTCAAGGAGAAAAA ATTTCCGAAAGTTGGGCCAAAATTATTGATGATAGCTTTCATGGGCGAAA AGATAAAGATGATATTAAAAAACTAAGAGAAATGTTTCCAACACCTAAGA ATTGTACGTTACCTACCCCAAAATTAAATATTGAAATTTGGCAACTTCTT AATGCTTTTCAAAAAAGATCTGATGTTTCATTGAAAATGATCCAAAGAAA TATCATTGCCGGAACAAGCGGTATTATCGAGCTCGTCCAGGATGTCTTGA ACAACAAAGCAGACAAAAAACAACTAGTACAAAAATCAACAGACATAATC GGTTTGCTAGGACATGCCTCAAATGAAATATCTTTGAAACGTAAACAATA TATTAAAACTGCCTTGAAAGATGAATATAAAGATTTGGTTTCCATTACAA ACCAAGAAGACTCCAAATCAAAATCATCTGAAAAACTTTTTGGAGAAAAC CTAAGTGAATGTATAAAAGATCTTAAGCTGAGGAATAAACTTAAAGGCCC CACTACCTCAACACGTGGAAAACACCGAGGTGGTTACAGTGGTAGATTCC AACCTTATAACAAGGACAATTCGTCTTTTTTAGGGTACGGCCGGAGGGGG ATGTCCTCCTCCACCCAATCAAGCCAACCCAAACAAAGATTTTACAAAAA GAAAGGAAACTGAATGCCTCAGATGCATCAACAGAGCAACAGAACAACAC ACCCTCAGAGGTAAGCAATTTTCTAAAACTTTGCTCTCATAAAGTAGAAA AATTTCAAGGTGGTAGACTTTCTAATTACTCTAGCCAGTGGAAAACACTA ACTAGTGATAAAAATATTTTGGATATGGTTACTTATGGGGACACTATAGA ATTTGAGAATGAGGTTCAAAGTAAACACTTTTGTCTAAACCAATATGATA ATGAAGATGAGAGCTTAGTCCTCTCTGAAGTGCAAAAAATGCAAAAAAGG GGAATTATCAAGGAAACTTCTCATGAAGAGATAGAATATGTATCTCCCAT ATTCTGTACCCCAAAAACTGATGGTGGGATAAGATTGATATTGAATTTGA AAAAATTAAACCAACATATAAAATTTCGTCACTTCAAAATGCAAACCATC AGGGATGCTTTACTAATGATAAATGAAAATGATTTTCTGACATCCATAGA TCTTAAAGATGCATACTATAGTGTTCCTATTCATAAAGATTTCCAAAGTT ATCTCAAATTTCAATTTAGAGGAAAATTGTTTAAATACACCTGTTATCCT AATGGCTTAGGTCCTTGTCCTAGAAAATTTACCAAACTAACTACTGTCCC CATGAGTGAGATAAGAAAACAGGGTCACTCTATAGGTGGTTATATAGATG ATTTCTTAATGGCTGAAGATTCATATCAGAGAGCCTTGAGAGGAACATTA GTGGCTGCAAAACTTTTTGACTTTGCTGGGTTTGTAGTCCACCCAATTAA ATCTCAGTTATTACCATCACAAAGAATTGTTTTTTTGGGATTCCTTATTG ACACAGTGACAATGACTTTAAGGCTCACGGAAAAGCGCTCAAAAACTTTG AAAGACCACATTAACAAACTCTTGACAATCAAAAAACCAACAATCAGATA TGTTGCTAAGGTCATTGGTCATATTATTTCGGCACTTCCGGCTTCAAAAT TTGGTGCATTACATTACAGAAAACTTGAAAAGGACAAAACTAATGCATTG TTTGAAAATGACCACAATTTCGACGCCCAAATGGGCCTTAGTGAGGAAGG AAAAAGAGACCTGATCTGGTGGAGAAACTCACTTCCTTCACTAAAAAATT GGATAAGACCTCCCAAAATAGATGAAACCATCTCAACTGATGCATCAAAA TTTGCTTGGGGTGGAATTTTTGACCAAAATATAGGAGGCTCATGGTCACA ATCTGAGATTGAATACCACATTAATGTAAAAGAGATGTTAGCAATACTTT TCACTTTAAAAAGTTTTGGGGAAAAATTTGAAAATAAACATATTACTATA TTGTCAGATAATACAACTGCAATTGGGGTGATAAACAAAATGGGCAGCAG CAAGAGTGTCTTATGTGACAATACATGTCATCAGATTTGGGAGTTTGCAC AAAAACACAACATGTGGATAACATGTTCTTACATCCCAGGAAAAGACAAC ATTGATGCTGACCATGAATCAAGAAAAAATTATAAAGGGAGTAACTGGAT GTTAAACAGAAAGATATTTTACAATGTTTGTCAAGAACTGAATTACTACC CGGATATAGATTGCTTTGCAAATAGACTAAACCACCAGACTCCCACTTAT ATATCATACAAGCCAGACCCAGGAGCAAAATTTGTTGACAGCTTCACATT AAACTGGTCTCATTTAAATTACCCATATGCCTTTCCCCCTTTCAGCTTGG TGGGAAGAGTCCTACAAAAAGTCAAAACAGATCGAGTCGAGAGATGCATG ATAGTCGTCCCAAACTGGCCCAGCCAGCCTTGGTACACAAAATTAACAAA GATGATGGTCTCAGAACCAAAAATCATAAAACCAGGTCAGAAAGTCTTAG TTTTACCGGAGGACCCGACTGCAATTCACAACATCTGGAAAAGAGTGGAA ATTATGATCTGCCTTGTGTCAGGGAGGAATATTTAAAACAAGGGTTTTCT GAGGATGCTATTGATATTTTAATGAAAAGTTGGCGCTCGGGAACTGTAAA ACAGTACCAACCAGTAATAAAAAATTGGATTAAGTTTTGTGGGAATGACA TAGATCCTTTTCAACCACCCATAACAAAGTGTCTTGATTTCCTCTCATCT CTTTTCAAGAATGGGTCAAGTTATAACCAGATAGCAAATGCAAGAAGTGC TTTATCGTCAATTGTATCACCAATGCATGAAATAACCTTTGGTAGATTAC CAGTTGTAAAAAGGTTTATGAAAGGCATTTTTGAAAGTAGACCTGTATTA CCTAGAAATAACATTATCTGGGATGTAAATATTTTATTTGATTATCTTAG AACTCTACCAGATTTAGAAGCTCTGTCCTTAAAACAGCTAACTCAGAAAT TAGCAATTTTACTGGCAATTGCCTCAGGCGGCCAAAGACTTCAAACTGTC CATGCTATTCTTTTAAAAGATATCATTTTTCAAGAAAATAAGATTATAAT ACCTATTACATCTGTTCTAAAACAAACGAGACCCTCAAAACACATTGAGC CTCTGACTATCAGAAAATTTGGGGACAAAAAGCTATGTATACACTCTATT CTTATTTACTATATTGAATTTACAAAACCATTAAGAAAGGCAGAACAATT ATCTATAAGTTATAGAAAGCCACACAAATGTGTCACAAAAGATACTGTGG CAAGGTGGTGTAAACATATATTAAGAAACTCTGGCATCGATACCTCTATT TTTTCAGCACACTCGACCAGATCCGCAACGACATCTAAAGCGAAGTTACG TAAAGTCCCAATGGAACACATCGTCAGAAATGCTGGATGGGCAAACGCTC GTACTTTTGCAAATCATTATGACAAAACTGTCATTGAAGACATCAATCTC TTAGAAGCTTTAACAAATTGAATTATATTAAAAACTTTTTGTTGCTATAT ATATTAAAATTATTTGACTCAAATTGTTGTACTCAGATTACACAATAGTC ATTCTCTTAAAGAAAAGAAAAGTTGAATTTATATCGAAAAGAATCGATAA TACTGTCTAAAATTCTTTACTCTGAATTCCGAAAAACTTAGGCACACTAC GAAATCTCGCTTTATAGTCGGACATTAAGGGAATAATTTATGCAATAAAA TTATCCCAAAACAAACGATACTTACCTGTAAGTTGAAGTTTGTTGGGAGT TTTATTAATAAATTATTCCCAGATGGATGAGTATAAAGTGCCCACCACTA ACAACCCACCCATTTTATACTCATCCATCAAATGTACCAAACTTTTTCGG CTATGCTACGAACCCTGAAGTTAGCTGCGCGTTCTATCTCACTTTATACT CATCCATCTGGGAATAATTTATTAATAAAACTCCCAACAAACTTCAACTT ACAGGTAAGTATCGTTTGTTTTGGGATAAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028536TCONS_00028536Clytia hemisphaericatranscript
TCONS_00028535TCONS_00028535Clytia hemisphaericatranscript
TCONS_00028534TCONS_00028534Clytia hemisphaericatranscript
TCONS_00028533TCONS_00028533Clytia hemisphaericatranscript
TCONS_00028532TCONS_00028532Clytia hemisphaericatranscript
TCONS_00028531TCONS_00028531Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028532-proteinTCONS_00028532-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000690supercontigsc0000690:824..5756 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.65 16.26 7.69 6.08 5.91 3.95 5.44 6.52 6.4 4.74 6.3 11.23 11.45 11.51 17.01 18.44 17.06 17.97 16.87 12.97 15.67 12.47 20.68 15.81 8.86 9.99 16.13 13.49 13.18 11.29