XLOC_016294 (gene) - C. hemisphaerica

Overview
NameXLOC_016294
Unique NameXLOC_016294
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000700:118748..126852-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016294 ID=XLOC_016294|Name=XLOC_016294|organism=Clytia hemisphaerica|type=gene|length=8105bp|location=Sequence derived from alignment at sc0000700:118748..126852- (Clytia hemisphaerica)
GCGTATGTGAGATGCTTGAATGAATGAAATGGTAGGTAGGTAGGTAGGTA TACATGTTTGGGTATCTTTTGTTACTTTGTTGATGTTTAGATGGGAAGGT TTTCTTGTTTTTGAAGTTGGAATTGGAAACGCACGAATTTTAGAGGGATT ATGTAGGCGAGATTATGTAGTGCTCCAGTTAGTCTTTTTTGTTTTGTTGT TATGTTACATATGTTTTTTTGTCGCTTTCTGTTTCGCTGTTCTTACTTGT TTATCTTCCTATACTTTATTCGTCGAGTATTTTTGTTCTTTCAGTTTCAT AGTTAAACTTTAAGAAGTATCGTTTACATTGCTCAACTTAAAAAGTTAAA CATTCTTAAAAGTGTTGGCTTAAGAATGAGTATTGATGAAATCGACTTGG GCTTTTGACAAAAAAGCTGTTGGTAAGAGACTTCAGGTATTAACTTTACC TTAGTGAAAGTACTTATCCAAAAGAAAGGTAACCAGAAGAGCTAGAGCTA GAAATTAATTATCGTGTAGATACAGTTGCTGGTAGAGAGAAGAATAGTAA CCAGAAGAAGAAGAAGAAGAATCAAAGTTTTTTATGCTGTAGAAAGACAG AACAGGAAAGACAAACAAAGTTCTTAAAAAGTCGGCATCGATGATGAGGA GGAAGAAATCGATTTTATTGTTTCGTGCTATGATTATACAGTGTGTTGTT TATGATGAGGGTGATCAACTCGTTCTATAATCAGTCACCATCTGTTTTGG TTGATTTCAAACAATGCATAAATTTGATGAATTTATAATTTCATTTAAAT TGTTCTTCCTTTTTTTTTGTTTCTTTCCTTTTGAAACAAAATGATCAAAT TTTTGTTCACACACCAGAACGCCTCTTTGACTTTTTCGTTCTTCAAAATG ATTTTTGATTGAACCTCAACAGATGAGAAATCATGCTTGAGTGAGCAAAC TAATCTATTGAAAAAAAATTCCCGTTTGCTTTGAACGGTGCTATGTAGCT GAGAAAAAAGAAACAATCATTCGGACCAACCAACCATAGAAAAATGTTCA TTTCTGAATGAACTTTCCCGCGCATTTTAGGTTTATTTTAATACATTGGT GTTTTTTTTCCCGAAGAAAAAGCACGTGGTCAATTTAAGATTCGCGACAG GGGGTTAAAACACAACTAACGGGTTTTTTATCATGATTATCGAATAAAAA GAAATCTTAACAGTTCTTTCCTATATTATACTAGTCGTAAAGAATGTCAT TATTTCGGGTCAGGCCCCAAGAAAGTTTTTACTTAAAATAGGGAATTTTA AATATCCAACTACGTTTTTAACTAAAATTTCCAATAGAATTATTCTAAAA TAACACGTTTTAAATAATATCTAAATGAAACAGTGTGTCTTCAAAGAGAG GAAAAAGGTCTTCAAGTAAAATTATTGAATTTGCTTTCCGTTATATATCC TTTTTAATAGTTTTGTTTTCAACTTTTAAATCAGGACAGCCCAAAAGATT TTTTGTTGTTACTCTGTTAAGAAGTGGATCATCATACAGGGGTCTCAGGG AGAAGTAAATCTTAACATATTTGAAAAATGAAAGAAAAAAAAGCTAGATA TGAATATTTCAAACTGAAATTTTTTTTCTTTCAATATGATATCCCCCGTC TAGTTTTCAAATATTCACGCTGTCCATGAAGAAAAAAGAGCACGACACTT AATTATGCAACCGGCCTTGAAATCCGCTACTCGTTTTCATAAATGTTGTT CAATACATAACAACTCTTTTTCTCGCCCGTCTCTCGTTGCTTTCACAATC ACAATTTATGCGAAAAAACGTCATAATTTATTCGGAAGTGAAACATAAAA AACAATCGGTTTAATTATGCGTTTAATTCTCATTGTTAGAATTTATTCGT TGTTGAATAGAGTTTCTTTTGTTATTGATTTCTCAATAACGTCTCTCTAT TTACGACCACTTGTGTTATTCAAAGCAAACGGGCAAAATATAAGAGAAGT TTATGGTTCAATGAATTTCAGATCAAAACCATAAACCAATGAGAGCACGC ACTCTTAACGAGAAAAACACTCGTGAATATTCGTTTTCAAGCATTTCTTT GAAATCAAAAAGAACAGACGACGATTTGAACGAGTATTAGTTTTTTTTCT CGACAACACTTGATGATATAAACAGTAGAATCGAGAAGTGTTTATAACAA GAAGAGACAGAATACAGAAGGGACTAGCTTGAACTACTGTGAGATTTTCT TTGAAGAAGACTTTTGTTGTGTTGTATCACTTACTGGCTTTCGTTGAGTG CATTTATATTGCCCATTTGGTTTATTGGTGAAAAAAGCCACGAAGAAATT CATTTGTTTCCATCAAAAAAGAAGAAGAATTATTTTCTCGATGTGTAAAT TTTGAGAAATAATTTTGTTTTTACTGGATTTTTAGATTGTTGAATAATAA TTGAACCAAAGTACCGCCATCATAACGCGTTTACACAGCTTCCGAATTCA CAGAGACTACCTAAGGATGGGCTCGCGTATCAGTTCAGCCAAAAGGACCA CTGAAACCCTTAATAACGGTAAAGAAACCAAAATAAAGCGACGAGGATTA AAACACGGTTGTGGCAAAAGAGACACTTTAAATCAAAACGAGAATTGTTT TCCCAGACCACGCAAACTGGAAATATTATTGGATAGGCCACCGGCCAGCC GAAAGGTACAGGAATATCATGGGTGGAATACAGATGACCGTAGCATGAAT ATTTACGTTAAAGAAGACGATTGTAGAATTTCTCATAGACACCCTGTAGC ACAAAGTACAGATGCTATAAGGGGGAAAGTTGGATTTTCTAAAGGACTTC ATGTATGGGACTATACTTGGTCAACTCGTCAACGAGGCACACACGCCGTA GTAGGAATCGCAACGAAAAAAGCTAATTTACATTGTGCTGGATATCATTG TCTGGTCGGTGCAAATCAAGAAAGTTGGGGATGGGACTTGGGACGTAATA AATTATTTCATAACGAAAAAGTAGTTTCTTCACAGACTTATCCAAAAAAT TTAGGCTCAGATGCGAATTTTATAGTTCCAGATACCATTCGTTGTATATT GGATATGGATAGAGGAGAATTAAGTTTCGAAGTAGATGGACAATATTTAG GAGTAGCATTTACTGGTCTACAAGGACAAACTGTTTACCCGATAGTATCG GCAGTATGGGGACATTGTGAAGTCAAAATGAACTACATTGGTGGCTTAGA ACGTAAGTTTTGTTTTGTTTCTTGTCACGTATTTTTTCTTCTCAGTTTTT ATCCCCCCAAAAAATACCATGTCTAATTTTCCATCTTCTCTTTCTCAGTT TCTTTTCTTCTTCTTCTTCATCTTATATATCTATCTTTTCTCCTTTATTT CACCTAAGATTTTTCTCCCTTTGTGTTGTGTTTGATAAACTTCGTATGAA AGAGAGAGCTGCTTGCACGAGAGAAAGTAGAAAGAATTTTTTCTTTTTTC AGTCAATCAGAGTCCCAGTGTTTGAATTCAAGCGTGTCTTATTTTCTTTT CAAAGTTAACACTCAACTGCAAAACTCTGTGTATTTTCCTTTTCTCTGTG TTATTATTGAACTTTTCGCAGTGACAAAGTGACATTTTTTCTGCCAATAT TTGTTTTCTTTGAAAAAGGGTCTCACTCATAGAGTCTCAAACAGTAGGCA ACCTCGAATTTCTTTGTCAAGAAATCTCATGCCTCAAGGCTTTTCATATG TGATTCAAAACTTCGTTGTTGTTGTTTAGTTGACAACAATTTTTTAGTCG TTGGGATAATTTCTTCAGGATGTCGCGTTAAGGTCGCTTCCTTAGACATA GCATTAAAAAGAAATACCCTTTGTCTCCTATAGTATTCATGTGATAATTT CCTATACTTTTAAAAGGCTTTCAACAACAATAAGATCTTTTGTCGTTATG TAACCAATGATTTGTGGCTTCAGTCTTTTTCTGTTTCAAAAAAGGGAACT TTTTTCTTGAAATAAACTCTTTTTCGTGAGCTACTATATACCATAAAATG TAACAAGAAAAGGGGTCTTTAAATTTATTTATTTTTTTCTTTGTTGTACT TTCTACAGTGTTTTTTTCTCATCCAAATTCTCGTTTTTGTATTGCTTTCT CTATCACGAACTAGTAATATGGCCTTATTAAGGGAAATCCAAGCTCACGA AATACTTCTCAAAAGCCTCAACCTCAACGATAAGATGATAAACATTAACG AAAACAGCTTCTCTTTCATACGTAAAGAACCTTTCTACCTTAAAAAGGGG GACTATTTTCAAACCCTATTTATTGTTGATAACAGAAAATGCATCCTCTT TCTAATACCTAACTTGGTCAAAAAGTTTTGTTTCAAATTTCGACACAGTG ATAAGGAAAGGAAAAGTTCGTCAGTATAGCGGAATTAGATTATCGTCTTT TTTGTATTTCCGTAACAAAATAATGAGTCGGTCCTTTGTTTCCTCTTTCA GTTGAGATGTTTTTTTTCTTTCTTTTCTTTCATCTTATGATCAAATAATA ATAAAAAAGCCAAAATTGCTCTTGGCTTTAATTGCTCCTTCTCTGTTCTT TTTGTTATTTTGGATGTGTTTTTTTTTTGTTTTTGACTTTTCGAACATGT GGCGTAGATGTGTGACGTCACATTTGCTGACGAATGAATGAGCATACAGA CATGTGATGATATGCGGAATATAATGATAATGAAATAGTGTTAATTTTTA ATTATGAAACATTTAATTGCGTTTCATTGTCTTATTTTTGTTGATATTCT TACTCACTTCTTCAACAACAAAAACTGATACAATCTGTTCACTCATTTTT CATACGAAACTTGTTAATGCCTTGTGAAAAGTTAACCCTACTCGTCGAAA AAAATAAATCGTTATCTAAAATAAGCTTTCTTATTCTCTATCACTATCAG CACTTTGTCATGCACTTAAAAAGAAGATATTTTACAGGATTTGTTTAAAG ACCCCAAAAAACATCATCAAACACTTTACATTCATGATGTCATGAATAAA GCTCTGTAACATTATCTTGAATCAAACATCATTCATATTATATGTGTGTC TTTTGATCTAAATACACATTGAGATTTTGTCTGAAACATCACTACTCATC TTTTGACGTCACACTGTATTAATCTATTCAACCCATATATATCTGTTGAG GAAAGGCTCTATTTTGACGACTATACATGATCAACGAGTGTTTTGTTATG ATATTTCGAGGTGTACTGCCTCTTTTCTTTTCGTGTGTTGTTTAATCACG TATTCAGGAAAAATATTAATATTACTGTTTAATTTTATGATGACGTCAGC CTCTTTTTTTTGCATCCCTCGATTTTTTAAGATACTTCGAAACTAAATAC ATTTATGTAAATTTTAATGAGTTTTCTTGTTTCTATAAACTCGTGGAATC ATGTGAAATTTGTTGCAAAGTCATTGCTATTTTTCCAATCAGAAATTTTT TTCGTGTGCGAAATTTAAGTATTCGGGTTCCATTTGGTGTTTTTTTAGAA TTTTAAGAAGATTTTATGAAATAAACAGATAAGAGAGAGGACGGCAAAAG CAGAAAATTGAAAACATTGTAAAAGAATTGAAAATAAGGGATGAAATATA AGAAAGAAAGGGTTTTATGGCAATAAACATTTGACTACAAAGAAAGCACG TGGCTTTTTATTGACAACAAAATGAATTTGCTAAAGTATATAATTTTCCT TTTTTTCTTTCTTTTTTTTCTTCTTTCGTTTCTTTCCCTTTCTTATTTTT TATCGTATTTTTGTTATTCAAGACTTATCTCCCTTTGCGACAGCTGGAAC AAAAAGAATGTAAAGAGGCATGAATACATCACAACCAAATTTTTCCCAAC ACAACTAACACAACACGCTTCTTTTCTTCAGAAAATTTCTTTTCAAAAAG CTAGATTTTCTCATTGTTTTCCCAAAAGTTCATTCGTTTTTTTAAGACTT CTCAACTCAACATCTTCCCATCATTCTCCAAGGAATTCAATCTTATCTTT CTAATATCACTGAACACTTTCCTTTCATCTTTCATCTTGATCTACACCCT TAAAGGCCCAGACCTAAATTATTCTATCCTTTGAACTGAACGAAACCATT TTTTTATTATGGCCGGTTCTTTTATGACATGTCTGTCTGGCGCTCTATTT AATATACTCCCCGATAAGAATCGTATAATAAAAATCTTTTTTCCTAAATG TCTTTAAACGTTTTCCTTCACTGATTAACTTAATCAAAACATTGGAGATT AATTTTATTTTTTTTCTTCTACAGCGGAACCTTTACCTCTGATGGATTTA TGCCGATTGACCATTCGTCAACAAGTTGGTAAAGAAAATCTCACTCAAGA CACTTTAGATTCTTTTAATATCCCAAGGCAGATGAAACAATACTTAGTCT ACAAATGGTAAAGCATAATGACGAGTTGCAGAGGATAGAGTAAGCTCCAA GGGGAAAAGACTGAATTCTCATCTCACAATTCTCTGGTGTTCTCTTGGCA AAGAAGGAGATTTAGGAATGTCGAAGGAATGATTGGTCAAAGGATTGAGG ATGGAGAACAAAAACAAAAGAATGATCCAATCATTTCCTTGTATCATCGT TCATCATCAGAGTCCTTCTCTTATTCAAAAGGCAGGAAAGTTTAATTGGA AATCATCAAAAAACCGACGGATTGCGGTATACGTCCATCAACTTAATTGG CATGTTCCACTTACCCTTATTATTACGAAGAAGGCGATAAAAAATTATAT ATTGTTATAATGACAATCTGGTTGAATGGAGAAGACAATACAAGCTTTTG TTTTGTGAACAGATGTTGGTTGTTATTATTGTGTTAAAAAGCACATAGAT GAAAAGATTAAAGCAATGGAAATTGTATTGCTATTGGATATTCGCCGGTC GTTGGTTATACCATTAAACGAGGCGATTTCGGAAATAGTTAACCGATTCT CGTTTCGTCTAATTTGAGGTTCCTGTAGTTAAGATGCCCACAGAATGAAA AAAAAATTACCTCTTACTAAAGCTTAAATGACTCAATTTGTGTTGATGTT GTTTTTTAAATTTGATTCTTTTTTTAATACAATTATTTTAACGGCTTTTG TTTCTCTTACTGCTCAAAGTATACATGATTAAAGTTAAGCTGCTCTGTTT TTATCTTTCTTGTGATTGAAGGGAAAAAATATTTTACTGAATCAATTTTA ACAGATTTTTCAGTCTAAAAATGGAAATTTCAAGCCGTTTAGATTAAAAA TTTTAGGTTAAAGAATTTTTTTAAATCATTTTAGAAACATAACTGGTCAT TAGAGAGGGCCAGTTTTCTTGTACACATTCTTTATATTGACAAAACACCA CGACCCTATCCATTTTCAAATTGGAAAAAACTTTTTCTTATAATTTAGAG GAAAAATTTGAAATAATTTATACTTTGTATTATAGATTTATGATAATTTA TGCGGAGAACTGTATCAAAAAAGTTCATCTATATTTATTACATACCTATT TTGTTGTTTTTAGTTTAGCATTATTATTATAATTAAGTGTTTATTATTAT TTTTTAAAAGAAAGAATTTTATCAGTTTTAGAGAGATTTTTTGAAAACAA ATCAACAGTTTTTACAAATTATTATGAAAAGTAAATTTTACTTTCTCTTC ATAACTACCATATACGTTTCCCCTATTAAACACCTTTGTTTTCTCCTTAA TTTTCCCTTTTCCCTTGTTATGGAGATTATTAAAATAGCTCCTTTTTCAC ATTCCGCCTTAAAATAATCTATATTTTGACATGTTTTGCTTTACCCTTTA CCTTTATCCATCCCTCAACTCCCCTGACGAAAACATTTAATTTATTTTTT TATTTTTTGACATTTTATTTTTCAATTTGATTTTTTTGCAATGCAAAATT TATCCGCCTTATGTAAAATTCTTTTCTCAGAGATATATTTTATCGCCATT TGCGATTACATTAAACTCGTTGATTTTTGTGATTGGATATTGTTGGTCTC ACCTTTGATTTGATATTTTAATTGAGTCTTTTTATCCTAGAGATCAGGAT GCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028729TCONS_00028729Clytia hemisphaericatranscript
TCONS_00028728TCONS_00028728Clytia hemisphaericatranscript
TCONS_00028727TCONS_00028727Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
SPRY domain-containing SOCS box proteinTCONS_00028727-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000700supercontigsc0000700:118748..126852 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SPSB4SPRY domain-containing SOCS box protein 4 Homo Sapiens
SPSB1SPRY domain-containing SOCS box protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.29 4.06 1.44 1.1 316.4 244.28 117.34 120.12 19.54 30.23 22.6 94.61 70.22 49.12 75.54 69.46 51.15 66.56 41.3 47.99 22.19 22.8 22.62 21 23.28 22.74 176.28 159.18 197.81 186.86