XLOC_026646 (gene) - C. hemisphaerica

Overview
NameXLOC_026646
Unique NameXLOC_026646
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003739:5646..9502-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026646 ID=XLOC_026646|Name=XLOC_026646|organism=Clytia hemisphaerica|type=gene|length=3857bp|location=Sequence derived from alignment at sc0003739:5646..9502- (Clytia hemisphaerica)
TTAAGATATTTATACTTAAAGTATGTGAAAAATAATGGGAGAGCCGTTAA
AAACAAGTTTATCTAGCTTGCATTCTTGTCTGAAATTGCAAGATTCAGCA
AGAGGTGGGAAAGCTACTCTGATTGCAAAGGACATATTTGGTTTCTCTCT
GGATGTTTCTCCACAAGAAGTTGGTAAGACCGCTAATTACACAGAAAACA
CTAAATATTTATTATATTTCTAGTATTACAGTTTTTTTTTACTCAGGCAG
CAAGTTATAGCTGACTTTTTTTCAAATTAACTTAATCCTACTACAATTAT
ATAGTCCTTTATGAGATGGCACTACCATTATCGTTTGACGTTTACTCCAG
TTCTTTTTCTTGTGGATTTCAATGGTTATGCAGGGTTATGACTGAATTTC
TCTGAAATAAACAAAAGGAAAAACTAAAATGGTAATGTCATCTCCTAAAG
GACTATTTACCTGCTATACTGTCTTTGCATATCCTAACCTCAGGCCAGAC
ATTAAAGAGTATCTAAATATTTTGCCAGATACTGATGTTTTTATCTTGTT
TTTTTTATTATACAGCTTACTGCTCAAGTTTACTCTTCAATGAACAAAAT
GGACTTGTAAAGTTTTTGAAACTTGCAGTTGGGCTCAGAGAAGTATTTAA
AGATGATTAGAAATTATTGAGTTTTTTGTGATTTTCCCTTTACTTTACTT
TTATTGGCATTAAGAATTTGTTTTTTTTTATAATTGAAAAAGTTTTGTTG
TTTTTGTTCTAATTAACCTTATTTTGTTAATAGTTTGAAAATGTTAAAGC
AGACATACAAAGATTCTTTGTGGAGTTCATCAGTTCCAACTCAAAACGCT
ACACTATTGATCAACTTAAGAACTTGAAGGTGAGAAGATTTATCCAATCA
GTATAGTAACAGCCGTTATCTCCTTTTATTCAACATTTTGATTCTATCCC
AAAAACATTCATTTATAGCCATTTTATAAGTTAATAGCAAAAAACAATAT
TCACAGGCATCGAAATAAGGGATAGAAAGTGCATCGCGATTTTTTGATGA
GCATGATTTTGCATCCTAAAATGGATCAATTTTCAATTTTTAGCTTGTAA
GTAATCCAAAAATGCGATACGCTAATTCGATCCCTGATTCATTTTATGCA
ATAAGACAAATACCATATCTTTGAAACCTGTCTATAGGATCAAAGTCTAT
CAATGATGATCTGCGATCAATCAGTGAAAGTGCGAACAGAAAGCATCAAT
GTGATTTCAAAGGTAATAATTTTAAAGTTCAAAATATTTGTCTTTTGTCT
TTATTTGTCTTTGTGAGATTAGTTCTTTCAATTAAGCACTCCTATGTTTG
CTTTTGAGTGAAACAATGTCTTGTTTGTTGGTACATGGATTAGTATTTTT
CTTAAATCTTCACCAACATTCACTCTTTTAGATTGTTACCATTGGTGATT
TTGATGAAAGCTTTGGAATCAAAGATTTGATTGAAAAGTATGCCAATCTT
TGAAATTCATAGAACCTTTTTCAATAGTAGTTTAAAATTGCTGAATGGTT
TGAATTAACGTATCACGATTCACGATGCGTCTTAGGAAATGCATGAAGCA
AAAAACTTAAAAACTCAGCAAAAACACGATACAAAATGATAAATTGAAAT
AAATATTTTGAGCCTCCAAGCAAATAGAACTGCTATTTGGCCTTTAAATT
AGTCTATAGAGTGGAAAATGCATCGTATAATTATAAAAACACATCGTGAA
AACTGAAGAATTTCATTAGCTAAAAAGTGCATAAAGTTCGATGCACTTTT
AAATTGTTAATTCGAATCTTGTGCTGTATAAAAAACTATTACTATATATG
TTTTAACCTTCATATATAAAAATTATTAATGTAACTTACAACCATGTAAT
ATCACATCGGTTATTGCACAGTCAAAGGTATCATTTCATGCTGGAATGTC
TTACAATCTTTTACGTACCAGTTCTTGCTAGAAAATGAAATAGCTTCCTA
TATTTTCTTACATCAGTTTTTGAAAGAGATTTTCTTAATTGGTTTGATAA
TGAAAACATTGTCTACCACATGGGGTTTGCAATTAGCCTTGCATTTAGAA
TATCTCCAGATTATTGTTAACATAATTGCATGTCTGTGAATCATTGAATA
TCACTCCCTCGCCGCAAGTTAATAAATTGCAATATCTAATGAAGGACCAT
GTAATGCTTGGTTGATGTTAATCTTCCATTGGAACAATCCATGGGTACTA
AAGTCTGTTCACGATAAGTGTGCACTCTTTTTTCTTTTACGTATAACTTT
AGAAGGGACTCTTCAATCTTTATAAATTTGGTAATGTTGGAAAGATATCA
GTGAGTGGAACAATTTGAAATAAAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGTTTTGGGTCGGCAAAGCCGACCTAAAGAGGAAA
AATATTATTTGTTAGGTTAGTCTAATTGTGTTATCATTTGATAACACATA
ATAATCGAGCCTCATTCCATTCTCTTTATAAAACATAAAACTTAATAACA
CAATTATAGAGCAGCTGAATTTGTTAGTTCGTTAATTTTCTTTCTATTTT
GTCTTTGCCGACCTAAACAAGCTACTTAGGATGGCTTTGCCGACCTAAAA
TGACCTCTAGGTTGGCAAAATTTTGCCGGCCTACTGCCGGTTTTGGTCGG
CACTTAAGTGCCGATATGATTTTGTCTGAATTCACAGGGCTGAACTGGAC
CAATACATGCCATAGGTTTTGCAGGTCAAACGTAATAAAATCATCCTATT
TGAGCTACCTGAATAGGGAAGAAATTTTTGCGAGAAGAAATTTTGCTGAG
CACAGAATTTAATCTAGGGTTTTTTGACAAATCCACAAAATTAAATTTAG
TGAAACACAAATATATTTCAGGATTAAAAAATCACCTCTAAAATTGGTCT
TTTTAAATTAAATTCCGTGAAAATTTCTTCCCTCAAGGGAATACATTTTC
AAGAATCGTGTTAAATGCAACAGATTGTACACACTCATCATAATCTTGCC
ATGCNTCAACATTTAACACATAGATACCAACCATTTTAGTATTTAACTAC
CCTGGGTAGTAAAAGTTTTTTTCGATTTTTCGTCACACCACCACCGTAGT
ATAAACGTCATTATGTCTGAGATTTTACTACCGACCCCCCTGATGCACAG
GAAAATAGACAAACTCATAGAAAGATCTCTTATTGTCTTTATTTTTTATA
GTGAAAAGTGCCATCCATTCATTGATTGGTTTGTTATGTGAAAAGTTTCC
TGATCTGATTGGTGAAGAAAAGCTGAGGAGAATTCCAAGAATTTATTTAC
CAACACTCAAACAAGAAATGGAGGTTGGTATTTTTCTTATGTACCAATTC
ATCAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042863TCONS_00042863Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042863-proteinTCONS_00042863-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003739supercontigsc0003739:5646..9502 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.44	5.3	3.51	3.43	2.14	1.43	2.26	1.91	2.89	3.14	4.32	2.17	2.28	1.62	3.14	4.33	4.02	2.64	0.98	2.23	2.83	2.72	3.17	3.4	1.98	1.44	5.05	2.33	2.32	2.65