XLOC_026728 (gene) - C. hemisphaerica

Overview
NameXLOC_026728
Unique NameXLOC_026728
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003820:14..6598+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026728 ID=XLOC_026728|Name=XLOC_026728|organism=Clytia hemisphaerica|type=gene|length=6585bp|location=Sequence derived from alignment at sc0003820:14..6598+ (Clytia hemisphaerica)
CTAGCTTCACGTATGCAATTGGGTTGGCCAACTGACGGATTACGTTTCGA CGGAGAGTTGGAATAACGAGGAAACGAAGCGTAAAGTTTTCGCTATCGAT TGTGAGATGGTAAGAGCGAACACTTTGTAATTCGTTTATCTATCGTTTTC TGTTTATTCGCCTTGTTACTGCAAAAGTTTTTATGTTTGGTTCAaacatt atggaagcaaacattcGATTTCCGTAAGGGGTCGCCtttacagattcgaa cgttttctTCGTTCTATGAATGAGTTACGTGACTTAACAAAACACGCAAA CCTAATGGTGGAAATTACCTAGTTAGTTTAGTAATATTCTTAAGAGACGA TATCTCTGAAAAGAATTTGATCTGTTTGGAATTGTCAGAGGAATCGTTAG agatttttcaagaactttttgccaaaattattCCTCCAACGCTGGTTTCT CTTTAGCTCAGTCGGTAAAGCGCTCGCATAACTCGAAAATACTTAGATGC CTATATATAATCCTCACGCGAGGAGTTTTTAGAActaatttcttagtttt taattGATTCAATGTAATTAATTCTGGATTATCATCAAAGCGATTATCAG ATGAATAAAAGAATGCGATTCCGATAATCAAAGAAATAGTCCATAAAAGA TTTCGCAGATGGGACGCGTATGACAACCATTATGATAGTCCCCTagtccg aatagggttaagggctctgaccatagtgaatttttcataattgccgtgtt taaaatgtgttttctgactgatgtaaccaacaaaactatggcatgttata cattttctgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNaaatttgatgaagaagaaaatgaagacttttgcga ggaagagtatttcaactttgaagagcttagtttcggcgaagaaaaaacat tttgaaaatcttttcgcagtagatggtgtatcttttaccgaacaataaaa atttttgcggaaaatttttgtaaatgcttttTTGTCTCGAAATATGcaaa atagtgttttttcatcaatttttcatctggattttgcttaaaaaaacagt cgtAACTTTTgtcacatctttttagaaaaattttccgcaaaatttaaaat agttcaattctttgcggacagtgtaaagaaattttgaaacaaaaaagtta attacccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNaaggcaattctttgttaaaagtgttaaggaacct gaaatataacttttatgttcaaataccaaaatcaatttttggactatggt cagagcccttaataatGGAGCACAGAAGACCCAATCTCGAAAATCGCCCT CATAGCTCGCCCCAATTTCGTTCCAACTACCACGAGACTGGTTGAAATGA ATAACGGACCCTGGTAGTGACGGAATGTGTGACGCCAAACAGTTAGCAAT ACCACTTCGGAAAAATCCATTTGATTTTCGATTTACAAATTAGCtgtttt tattgcttttttaaaATACCAATTTCGAAAATTGCCCTCATagctactct gtaccagagtgtatctcacgtttatcgcttctcgtagtacactctgtgcg cattgtctgtttgataaaaaagttcccgtacggagacctgcGATGAAGCT TGATTTATAGAGaacaacacttctctcatcgtctcccctctctcaccaac actccatcgcagcggtcggtttgaaaaaactcaaatgagaaaagacaata acaacagacactctacggcaatgaattttaaaatcaaccgtagatactgg gtctgtgtacagacaacccCAAAGCTCGCCCCAATTTCTTTTGAACCACT ACAAAACTGGTTGAAAAGAATGGCTGACCCTGGTGGTAACGGAATGAGTG ACGCTGAACAGATAGCAGAAGATAATCAGCAATACCAGCTCGGAAAAATC CATTTGATTCTCGATTTTACAAATTAGCTGTTTTTATGGGACTTTTAAAA GACGGTTTTTACTATtaccatttttggacctaccccggtgggctgtaggt cctataaattaacctctgttcgtccgttcgtccgttcgttactagctttt ctcgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatgcattttcgctaaac gatatattttctgactgatttttttctcctcgcattgctatctaactttc atcatcaggtaggtccattcagcatctagcttgttaaatatcaattctta taaaaagtagcAAAGATTTAATGtcaaaaaaggggaaaattCTTAGAAAG CTATTATATGTGTATCTTCACATGATCAATCAAAAGAAGTCTTGCAATAT GAATCGATTATGTGTGTATAGACATCGTTTTTAAAAGCAAGCTCATTTGT TATGATGTTTTAAAGTAgagctttttttgttttgagttgtGTGTTTGTAA GTTGTTTGAGTTATTTCTAAAGGCCTTGAGATTTGATTTGACGGTTCATA CTATCTCTAATTATTTTTACACGAAATAAATTTATTAAATTGATATTATA GTCGGCATTAAGGTTACAGAAAGAATGAGTTTATCCAATGAAGGAAAAAA TATGCTAAAACTGATCATAGAGAAAGAAAATCGCTTCACACAACCCTGGA AAAACAGTGATGTCGTTTTGGTTGTTGAAGACAAAGAGCTCCATGTTCAT TCGATTACACTGTCAATGGTTTCTCCTGTTTTTGAAGCCATGTTTAATGG AAATTTCAAAGAAGCACAAACAAAGAGAGTTGTTTTGGAAGGAAAACCAT ACGATACATTTTTATACATGCTGAGGATGGTTTACCCTTTTGAAGACGTT TTCTTGGGTAAGTTCTTTCAAGTTTTATAATgtgaaatgaaaaattagac TTAAGTTTTTGCAGCCACCTTAAggggagaaattttggcgaaaagaaatt taaatttatagttcatttgccaaaataaattctcgtcaaatttaattttc tttcaatttagtctctgtttcttttttcagctaaataaaaatattgaaca aaaattggtcgttcgccaaaatttcttctcgccaaatttagaaattttat taaatcacCAAAATAAATTCCGGCATATTGCACCAACATTGGTGAATGgg ctcattcgccaaaatttcttctcttaaggtatttctaaagttttgaaGGA GGAAACTTTGACTAAAActgaaatctaaaaataaagtcaTTTAGCATTTT GATTTCTACAGTAAAACGAGAGCACCATTGATTATGCCGTGAAGTTTCCA TGGGGAACGCAAACACGCACGGGCAACGCAAAGTCGAATTatggagacat tcgagttatggaggttcaAATACAAGAGGCTCAACTGTATAACTCTGTGA TGAAAAAAACGATAAGGGAagcatttttcaaaactactttgtCACCATGT CTAATTCTTACAGATATTGTCTCGACTTTTTTCAATTAATAGAGGATGAA ATTTTGTATTGtgaaggatgttccaccgtcaaGAAAGGTCAACGAAAAGA TTTCACAAAAGAACCACCACGTTTCGGTATgtaaaattgagtttttgttt tcatgtgTTAAAATCACCAGCGACAGTTTGGAATTCTCAAGAACCGTATT TTTGAACGGTGTAAATTGTCTTGTAGCGTGTTGTCTAAATTTCTTGGATT CTATATTTTCAGGATATTATCATGGTTGCTCTgctgaatttaaagaaaaa ggtACGTCGGAGAACTGGAAAAGTGCACGGGGAAATCCATTCTCTTTCTA ATATGGAAAGATCCTCTTATTCTGAAttcaataaatacaaaatacgTTTT TGACACTTATTTCGGggaaaatttcctttttctttattGTTTTGTCGTAA AGTTATTCTTTGTAGCattcaaaatttcttgaagccttgggatgtccTTA ACTTTTTAAGCTTTAAGTAATATGTTCTAAAAAatacatattcttatttt caccattttgtcagCAATTTTGTAttatttctaagaaattggatgtttta agAGTCcattaaagccttaaaattccCTTAGCTTTTTCTTAATATCTTGG TCATCGAAGCATCCTGTTCTTTtgtagtttgctcttataaaaaacgatat CTCTTTTATTTTCACGCACGTGCAAGCATTATATTCTCTAACAAACGAAT ACTTGATTGACACAATCACCAAGAAAATCAACGAAGAATTGTCACGCCAA AGCAAGCAAATGTACAACTCCTCACATGCCCTTCATCTTCTAGAAACAGC CGAGCTTATCGAGTCAGAANACAACTCCTCACATGCCCTTCATCTTCTAG AAACAGCCGAGCTTATAGAGTCAGAAGATCTTAAAACGGCCTGCCTCGAT TATATCAAACGCGATTTGTATTCATTATCAAATGTTGATAAATTGCTGGA AGGAAGAAGTTTCACACTTAAGACCGAGATGAAAATCAAGTAACAGCTCT TTGAGAAACTTTTGGGAAGGTTGAAAGGTTATTGCACCCATTATAATTAC ACCAGTAGCGCAGAAGAGTGTAAGAAGGAGATAACGAAATTAGGTGAAGA ATTTCCGTCGATGGCACTTAAAGAAGGAAGTACATTTTGTCAATGTCAAA GGTTTGGGATTCGGATCTCCAGAAAtggaagatttaaaaaaagaatattt atgTAGCttaaatattttagattttttgccTTATTggtgtaaatgggttt ttgaaACAGTTTGTTGGCACAGCCACAGTTCCAGAGAAACAATATCATTC GTGGTGGACATGGCTTTACTGCTTCTTATTATATATTCAGTATTcatttt ctcatcattttttacGGACTAATATTTTGAAGCATCGTGAATTGCATGTT GCTCTTACTACAGCGTgtcgagaaaaaaaatgagtcaaaaaagagTTCAT ATAATATCTAAAGACGTATTGGTAACAAGCGTTGAAATCGTTTTGTATTA AACGTGTAAAAGTAGGGGGTGTATGATGAAATggc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042968TCONS_00042968Clytia hemisphaericatranscript
TCONS_00042969TCONS_00042969Clytia hemisphaericatranscript
TCONS_00042970TCONS_00042970Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042970-proteinTCONS_00042970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003820supercontigsc0003820:14..6598 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.72 0.74 0.15 0.28 1.38 1.21 1.05 1.18 1.85 4.23 0.16 0.87 2.74 2.61 6.76 6.82 4.21 3.79 3.45 4.25 1.98 1.46 2.01 2.85 7.61 7.61 4.63 4.92 1.49 0.94