XLOC_026994 (gene) - C. hemisphaerica

Overview
NameXLOC_026994
Unique NameXLOC_026994
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004090:1699..8303+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026994 ID=XLOC_026994|Name=XLOC_026994|organism=Clytia hemisphaerica|type=gene|length=6605bp|location=Sequence derived from alignment at sc0004090:1699..8303+ (Clytia hemisphaerica)
TCATGCCTTTAAGTTCAAGGCTTaaaagatttgaattttttcgtttaaaa tgaatttttaccGTCTATAGGTATGTATTTCATATTTCAGTTACGGTACA TACGGAGAGAGCTAATCATAAAAAATCGAGTGGTGGATATTTCAGATATT TGTTGTAGTCGCATTATAAGCCAGCTTTTCtttagtccgtataaaaaacc ccaaTCTGGaacacagatctgtaaagcccgaagggctagatcgaaaagtg aagcaagttttggtaggatttccttccaaagaaatcacgtgacaacaagc aatttcactggtttgagagatgcaaTATAGCGTTTGCCGCTTACTTTTTT TATCttgcgctccgaaaacaattaaaatacaAGATcgtatccatcggcac gaaatttaaaaagtcaaatctttgcttcaatttttttttgctagagaaag cttaaagttatCCTTAGCCTTTCACAAATCTGGGGTCtgaaagccttttg tttctttccattgtatCTAACTTAAAATTGCGTTGAATTAAAATTCAACT CGAACAGTTATTGATCTTCTTTGCATTGGTCAAATtatcaatgtaaacaa aacatATAGTGTTCGATGTTAACCAATGGAGAGAAACAAAGGGGTCCCAG acaatgttttttttacatggactacacgtttttttatgtaagaaaaaact atataaaaacataaggcttcgatgatcaaaaatcaagaacaagttaagaa cattttaaggctttacagatTCCAAAACACCCCATTTTTTAAGGAAATGC gggacaaaaatattcacaaaatggtaaaataagaatatgttaagaatatt tttttagacttacaactcaaaaatttaagaacatgcaaaggcttcaaaaa atttagatgttcttataaaaaacgtgtatggttttcaaaattatttactA ACGCACCTAGAGACAACACAAATGTATAAGACTAGATAAAAATTAAGTTA GATAAACGAAGTATTTCACCTTTGTTGTTGACAGTGGTTACATCCACCCT TCGTAAAATTTGTGTTTCGCCATATTGAATTACATTGATGAAGAAATATA GGGTCAAAATGTTATTCATTACGCCACCATTAATCATTTTTGTGTTTGTT CTATGTATGTGTATGTTCGATACATCTAAATGtcgcgaaaaaaaatatat atagatttcgtacgaaaataaattttattttctttgagaatTTTTTATAT AATGACACAATATAAAGTTATAAGATATATAAATATTATTGTACCAATCA CTAAGCTTCGTTCAATAAAATCTCCTTGGATTTACTTTGACAACAAATCA ATAATTTAAGGAATTTTTTTGTCAGGATTTATAATATAAATATCTTTGTT ATATCACCGGGATTTCGGAATTTTACCGAAAATTTAACGGTATTTCGCGA TTAAGACCCTGggatttttttattgaatttatagGGGTTACTTTTCTTGG TCGTATGTGTATCGATGTATCAGAAAACGTTGCGACTCTTCTTATTCGTT TCTCTGAATATGttgaaatattaagaaaagctaTACAGAATCATATCAAT TGATTCCATATAATCTATCTGAATATCGAAAATATATAACATTTCTataa attaaatatttcatTATAAATAGTgacaaaaaaagtttctataaATTATT GATGTGTTGGGAAGGTAAATCTAAGGAGATTTTATTAAATGAGGCTCAGT GATTGGTCAAATAATTTTAACTCCTATCCCAAAATACTTATTGATTTTGA GTCGCTATGTCATTATATTCAGtctttaagaaaaaataatcaGAGAAAAT TACATTCATCTGACTGAAGTCGATTTTTTCGCGACATTTAGATGCATTGA ACAGGTTTTCACATAGAACATACACAAAAATGATTAATGGTGGAGTAATG AATAACATTTTGGTCTTATATTTCTTCATCAATGTAATTCAATATGGCGA AACACAAATTTTACGAAGGGTAGATGTAAGCACTGTCAACAACAAAGGTG AAATACTTCGTTTATCTAACTCAATATTTATCTAGTCTTATACATttaca cctccttctcacagaccggTTAGTAATTTTTCAGCCaacggggataaaaa taacgtaGTGAAACTCATTGCGGATTGATATTCACatagtttttatggct ggggatttcaattcttttgttttcaaaccataaaattcagtggggatggg aaaaatggtaaatatttcgcagtgaggattggtttgtttgattattttca tttgggacaaaaattggaggataatatTTCAccggggatgatattttggc caatttttctagtgggaagGGGTGTACATTCATGCTGTCTCCAGGTGCGT TAGTTGAGAAGTTTGAAGAACTATAGTCCTTATAAACACAAACCCAttag gatttttcagccagtgggggtgaAATTAACGGATTCAAACGCAATTGAGA TTGATGCTCCTATGTTTTTTATAGCGGGAGGTTTGAATTCTATTGTCATT GTCTTCAAGGCAAAAAATTAAGTGGACACAATACTTTGTAGTGAGggttt gtttatttgattattacaAGTGGCAACGAAAAATGGGGTATAAGCTTCCA CTTTCCAGTCAgagggggtcccaccgggtctgtgagaaacaGGTGTATCT TATCATTTGCTTGCTTATaaaatagtttgttttgctcactttgatCATGT GACCAATCCAAAgaggattttttattttaaaaactgttcaaatcaatctt ttaactatttttttacacaaagaaaaagtcaacaaaatatAATAAGAATC GGCTTGCAGACCATAGGGTTCTTCATACAGACTATAGAAAAACTTACTTA CAAAGACCTAAAAgagcattttttcaatttctcgcgaaaaactgaaaact ggttTCTACAAAACATTACTGCTAGGGAAGAAAACCATAGATagcgtact ttcaacacaaaaagtttcagccgaAAACTCTACCTAACTTTTTTTAAGAT AGATGGTATATTTTCTTGTAGGTTTAAAAGGGTATCCCTGGTAATagtgt tattatttttcagtTGAGTATGGCTACGTTAAAATGGTATCGCACGACAA TCACATTCTCAATGTGACAGCAATCAATATATCATACCACAAAACTTCCC AAGAATGCATTCGAACTTGTCTCAACTTTACAAATTGTTGGAGTATTAAT TTGAAAGAACAGCCAAATAATGAGATTTACGAGTGTCATATTTTGGATAC TGATCGATTTCGAAAcgcgtcaaattttgtttcttccaCTACAGGAAATT CTCATTTTTCACTTGATGTGAGTAAATAATAAATTATCAAACTCGTCCCC TGTCTTTTATATGACTCATAGAGTCTTTTTGATTGTCTTAACCTCCATCa gttcagtaaaatcaaaaagtaaaagaattttATAATTTGTGACAGGGGAT GACTCAAAGTAAATCACCTTTTATAGAAGAACCGAAATTCCACGGGGGTA ATTTAACAAAGATTTTTATCGAATTGTTTTGGAAGTTTTGACTACTTTAT GCAAATATGACGACATTTCCTCACTTGATGGGAACAGACTTCTGTCATTT TCTTTGTGAAAACTCTCCTTGTCATTTTTTATAGCATGATTGTGAATGGG AGGAGACATGCATCAACccaaacaaaaaatgtattcCAAACTACTCTAAT GGTTCTTATGAATGTGTGTGCGAGCCTATTGGTAAATACGACATTCATTG CATAAGTAAGTATTTTCAAtgagaaaaaatgatttaaGGGTATAAGATTc cgaaaatgaatttttttgacaatttcagGATGAATATTATATGAAAAGTA GCACTCTCCCATTTAGGTTTTACGGGATTCGCTAGTTTTGTGTGCTTTGA CTCTAGATCTTGTACCAGTTGTCATGAATACTTTGCTCTTCGATAAATTA AACCTTCCTCAGGAATAATCGTACGATATGATATTCACGGCACAGCTCAG GCGGACGCGGGGAGATGGGAAGACTTCAGCCTCACCACTTttaagcaaat gagattttttcttcaagttttatcttattttgagccttcagcctgcCCAT TTTCACGgttgttccaccgggcctgtgGTATGGGATAACATATCCATAAC AAATGGTAAAAGATCTTACCAAGGACACCACAATCCTCTGAAATTAACCT GTGGAGACAAACCGTAAAACTGTCATCATAATTGTCTCAATCACattaat ataaaaaagaatcgaaggtgAAGAGGAAATTTCATCATTTAAAGCCCAAA TAGATtataaaattttcgattttcagtTAAATGGATTTCTAATTACATAA GAATATGTATATTATGTTCTGAGGTTACTTGATCTTCACTGAATCTTTCC TATGTGTGTTatttgtgatttgattggtacgATTTTTATCCAAGATCTTC AATGATTGCTATGGTGGGGATTCTCTTTTGGAAAGAGAAAGCAAGAAGCT CTTGCGGCAGAGTTTCTCTAAAATATTTCCCGCGTTTCATATGTAATGGT TATGAGCACAGGATTATGATATATTGTATATTCAACAGTATTAATAAATG ATTGTTCATCATTCGTTCTATTAAATGTATCAAGTGTTCTGAGGGATAAA CTAAGGAACCATCCACTTAGCTATATGTTATAAACCTTAGTCATTAGCTA TTGGTGGATTAAGATATCAATGGTGCATACCTTATACCGCAGAACATTGG AGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATTGGAGGCCAGAAT GAGATGGTCATTACGAATCGTTTAATAATTTATAGATCTTACCAATAATG AATGAACTATCTGTTTAATTTGGTCTGATTCATTTTTGATGTTGCTAGTT TGGCTGTAAAACACGGTTTTATTGAAGGGTTTCAAGGAAATAGAGACAGA ACAGGTTTCAAATTTCCCAGTTCGCCTTCCAGCCCcttccccgtgtatcc caggctttatttacgtttcTGATGATGGCAGAGCATACGGATATTATCTG ACGCTATCAGTAAACATTAAGCCGATAATTATGCTATCAGTAAACATTAA GCCGATAATTATGCAGTTTGTTAACGATCACCaatataaatttcttttca gacAAAAACATTGCATTTCAAAGACCAGTCAGTTTATCGAGACTACAACC GGGTCATGGGAAACCTGCGTTTGTTACCGATGGTTATAAAGGAGAAATGT GTAATAATTTCTCAACCAATCTTATCCACTCGGAAATAGGAACTATGGAA ATCTGGCTGAGAATTGATTTGGGTGGAatgaaacaaattaaatttgttga tattttcgaTCGTACAATAGTAAAACCTTATCATCAACGACTTGCTTCTA CAGATATTATTGTGTATGGTCAGAATCCTATGGATAACCGCCAGCTTTGC AGTACTATAACATTGCAAGATACTGAAAATGATGATAAGGTTTTTAAAGT TTGTAACGAGATTTTGACTGGGAGTGGAGTTGAATTGTACAAGGCCCCCG CCGGTACTAGGCAAATGATTCATCTTTGTGAAATAGCTGTCTACGGACCT ACAAATTAAACTTCATTATTTTTACTATATCATACAGGGTGTTTCACAAA AAAGTAAACTGAAAAAGCAAGGCAgtttttagaaagaaagaaagatcaAG TCATAAATGCACAATGGTATGACTTTTCAACACTGGAGACCAATTAAGCT CTCCTTAGATACGACCACCACCATCACCTTGCTTTACTTTGAAGCACATC TCAATGCTGAGACTTCGCCCATATTTGAAAAAGATTCCAGGAAAGTAAAT TGCTCAACGACCAGCTTGCCATCAATGcagatttatttttcatttactgG GGAGAGGATTATACATTTGTCACCATTGATTTTGAGTCCATTTCTTGCAC ATGCGGATTCCAGTTGGTGGGAAGCAAgttcaagaagaagaaaagtaaCG GTTATGAGGGTTGTATCGTCTGCATATCTAACATCGCAGCATAATTCATC ATCAAGCGTAATTGTTTCTTGAAGACATTTTAGTTCTTTCATTAAGAAAT CGAGAAAGAGGTTGAATAGGGTAGGGGACAATAAACATCCCTGTCGTACA CCAATTATAACTTTAAACCACTCAGTAAGCCGACCGTTAACAATAACTGA ACAAGTTGTATTGTCGTACATGGTTTTGACGATGTTGACAATATTGGTCG AGACACCAATGCCGCACCAATGGCAAGCAACATCTTCCATAGTGCCTCTC TCCAGACAGTGTCGAACGCActtttaaaatcaatgaaattgaaatgtagA TTGACACCACACTCTTTTGTCTTCTCCGTAATTTGCCTGACGATAAAAAT CGCATCTACTTAGATAAAatcattttaagaaaaatattattctATTTAAA GGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043282TCONS_00043282Clytia hemisphaericatranscript
TCONS_00043283TCONS_00043283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043283-proteinTCONS_00043283-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004090supercontigsc0004090:1699..8303 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.05 0 0 0.54 0.54 0.37 0.24 0.03 0.42 2.36 2.07 0.15 0.16 0.06 0.15 3.28 2.66 0.38 0.41 0.11 0.34 0.77 1.12 0 0.03 0.06 0