XLOC_027594 (gene) - C. hemisphaerica

Overview
NameXLOC_027594
Unique NameXLOC_027594
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004741:23..2229+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027594 ID=XLOC_027594|Name=XLOC_027594|organism=Clytia hemisphaerica|type=gene|length=2207bp|location=Sequence derived from alignment at sc0004741:23..2229+ (Clytia hemisphaerica)
acttttttactaCCGTATACcggcaaaaatactcaatccaagattgagtt
atgaaactcaatccaaaatataaaaaaaaattcaaaagtagaactttaaa
aagttttaaagtaGTTTTCTCAGAAACGCCCATTATTTGTTTTTAATCAG
TGTAGAGAGTAAAGACAAGAGAATGGAAAAATTTGTTCTCTCGTAATGTT
TCTTGGTACGCAGTCACGTCATAAATTcgatgtgtttcattgttttcatc
aGATAATTCATTCATTGCTatgttttaaaaacttttttgtttttcactaC
ACCCTTTTATCTATCCGGTGTTTACTAAAAGTAAATTCTTGAGGGTGAGA
TATTTATTGATCTTttcaaggaagaaaaaattagagAGAGCTTGATTGTT
CTTTCTTTGTTTCGATGTAACAGTCTAGGTATTAAAAGACGAGtggtttt
tcttgaaaagaaaaaaaaatttaattgatttGAATTTATGCACCATATAA
GTCGAAACGCTTTCTGTTTAGAAAAGAttaatttgataaaaactaAATGA
AAGATGGGAAAGACCGCAGGAAAGGTATCAACGCAAAAAGGTACAAAACA
CCAATATCCAGCAACGCGTAAAAGTTACACACATAGTCGAAAAGGAATTG
GTGGTagaaaaaagaaacaagaaaGGATTCTAAAACCTGCAAAGAAAACT
TATTTTGATGAGCTTCTACAAAGGCAGAAAGAGAAAGGTtagttttttat
atatttcttttAGATAATAGAAGTTCCTTGCTATGTTCCACCATCCGTAT
CAGGGTTCTAAATTCCATCGCTATAATTTATAACGAATTGGAGTGTGACA
TTGACCGTTACTATACATTCCGTTACATTCAGAGTGTATTCGTCATCTTT
TATTACTATAACTAcgctttttcaaatataattaattaaaaaaatatcct
tTTCTAATGCAGATCAATCACTCGCCAGTTGCTCGAAGGAANGTATCCGG
TGTTTACTAAAAATAAATTCTTGAGGGTGAGATATTTATTGATCTTttca
aggaagaaaaaattagagAGAGCTTGATTGTTCTTTCTTTGTTTCGATGT
AACAGTCTAGGTATTAAAAGACGAGtggtttttcttgaaaagaaaaaaaa
atttaattgatttGAATTTATGCACCATATAAGTCGAAACGCTTTCTGTT
TAGAAAAGAttaatttgataaaaactaAATGAAAGATGGGAAAGACCGCA
GGAAAGGTATCAACGCAAAAAGGTACAAAACACCAATATCCAGCAACGCG
TAAAAGTTACACACATAGTCGAAAAGGAATTGGTGGTagaaaaaagaaac
aagaaaGGATTCTAAAACCTGCAAAGAAAACTTATTTTGATGAGCTTCTA
CAAAGGCAGAAAGAGAAAGGTtagttttttatatatttcttttAGATAAT
AGAAGTTCCTTGCTATGTTCCACCATCCGTATCAGGGTTCTAAATTCCAT
CGCTATAATTTATAACGAATTGGAGTGTGACATTGACCGTTACTATACAT
TCCGTTACATTCAGAGTGTATTCGTCATCTTTTATTACTATAACTAcgct
ttttcaaatataattaattaaaaaaatatccttTTCTAATGCAGATCAAT
CACTCGCCAGTTGCTCGAAGGAAAGTGGCTTAAATGAAGAACAAAATCCA
GAGAGgtattcaattttttcgctATTAAAACGTTTAGAACGTTTTTAACA
ATTTAGAAAGCTCTTTATACTGCTCAGTAGAGTTCAAAGCCTAGGGTTAA
AAATAGGATTGATGTAAAGTATCATCTATAATTATTCATTCGTTCCCGTC
AGTAAATAGCTGAAAAGCACTTTCtcactcaaaataattctatCAACAGT
GGTAGTCTGATAATGTAACTTTTTCAAGACCGTTATACTAATTCTTTATA
GCATATCAGATGACGAAAGTTCTAGCAACACAAAAACCGATACTGAAGAA
GATGAATGGTATAACGAAAATGTCagcgaagaagaagaagaaggtgATTC
AAAGCTAGAATCAGGAAGTGACTCAGAGCTTGAAAGATCAGAAATTGATT
CAAATAACAACTACGCAGGACCTGAGGATGGTTTGGATATTTCCACTTCT
AGCAAGATCGATTACAGAAACTTTCGCCTGGGACCTTACGTAGAACAATT
TCCTTNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043927TCONS_00043927Clytia hemisphaericatranscript
TCONS_00043928TCONS_00043928Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043927-proteinTCONS_00043927-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004741supercontigsc0004741:23..2229 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0.56	0.35	0.14	0.87	0.55	1.35	1.69	0.83	0.9	0.49	0.68	1.01	0.65	0	0.03	0.03	0.03	0.14	0	0	0.23	0.05	0.08	1.58	1.83	0	0.05	0	0.04