XLOC_028371 (gene) - C. hemisphaerica

Overview
NameXLOC_028371
Unique NameXLOC_028371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0006160:112..2298+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028371 ID=XLOC_028371|Name=XLOC_028371|organism=Clytia hemisphaerica|type=gene|length=2187bp|location=Sequence derived from alignment at sc0006160:112..2298+ (Clytia hemisphaerica)
TCCAGGTCTGTTCTTTGGTAATGTTACGGTGTCAAAGCATTCTTCACATG
GAAAACATCTTTAGTAAAGACATCATCTCCAATTTACTTCGGTATACGAT
GACAAGCCGTGAGAAGTGGGTTTGTTATGCTATCAATGTATTACTCAAAA
GCGTGATCATACAAAAGGACTCGGTCCTACACCAAATCGGTGTTTACAAA
ACGCTTCAATCActcatgaaaaagaaaaaagagaccACGGATTTGAAAGA
CGTGCAAGGTCAGCAGAATCAAAGCCCTGCTTCTAAGTTGGAGCAACTTA
AGGCGCTGAAAGAGAAAACGATTCATAAGAATTTCTTTGAAGTTACGGAA
GGGAAATACACGGGAGCATTAGCCAGCGACAAGTTTCATGAGATGACTTC
CAATTCCGATAAAGACGAATTAGGTACTGGCTACGCAGAATGTGACGTCA
TCCATCCAGTTTTGAATGATTTCAGTAAGATTTTGAACTCAAATATCAGT
GGGTTGGAGAAGACAATATGGACCAATCAAAGTATGGACATTCAACAGGG
GGCAGGTCAGAAACTTTGGATTCCGTCTTGTAAGACATTCGCCGACGAAG
TTGAATCAATGAAGGATCGATCGGTTGATTATCTGGTTCATAATCTCTGT
GAATGTTTGGAGGAGAATCACCATTCGCCGACCACCGTCCAATGTTTAGA
GGTCGTTCTGTTCGTTGTCAACACAACGTTGCTTGAAAACACACCGAAAG
CTGCCGATCAAAATACAATGCTGAGGTTCTGTGAACAGGTTGTCAAGCTA
GTCGTTAATTTGGGAGATACCACAAATCCATGTTTAAAGTCCGCTATCGA
CAGGATTGTCAATGCGATTTTAGCCGAACCTGTTTATGCTTCTCACTTCT
CCTTAAAATTAATCGAGTTGACGTCTAGTGGTCATACCTCAAAGCTGCCG
AAATCACCTGTGTGTTTGACCAATGTAAATATGTTATCCATCGCAAAGCT
AGCGTCTCTTTCTCAGCCGACTGTTGCGGAACGAGTTCTTTTGAAGCAGT
TGATGGTCCAAGTTGATCTACAAGAGTAAGTAAACAAACGCGCATTCCAA
GTAGGTAACAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaa
gtgaatatcagaAGAAATACTGTTACTATTacttttcgaaaacccgcgac
gcttctgattggtcaagcgctgaaattctattgtaatgtcacatgACTTA
GGTAggacttttcagcaaaagtacgccatctagctattcgggctttataa
atccaTGGTAGGTAATAGTGCATTAATTTCTTTCATGTATAGCCAAAAGA
CAATGTCGTTTGTTTATTTTATCTGACCGAACGTACGATTAAGTAGCAGA
AAGTTTTCTCTTTACTTTATCTGATAAAATCTTTACATGCGTTTAGACGT
GCTGTTAGATTTTCTCTGAATGTTTCGGCTACTTTTAAGAGACTCGTGGA
TTTTCTGCCTAGTTTtttatttctagtttttttacttttctagtAGTACT
TTGGACTTTTGCCATATTGAAAAACCTCGGTGTTTTCTATAAAGAAAAAC
TCTTTCCCGTTAGGATTTGCTGAGGGTGCACCCCCGTGTGCCAAGAACGG
AAACTCGACCTCCTCTTATTTGCTTTTCTAAAGATAGAGCAGTTAAAGGA
ACTACTTTTTCTACGTCCTCTTCTTTCATCATAGCATTGACACATTGAAA
GCGTTGGAGACATACAAATCAATCACCCTGAACGGCTCGTTCATCATTTG
GTCACATGATACTCAAGAACAACAACTCACCACCAAGTTGGCCGTCAATC
TGTCCAAATATCTCGAGAAATTCATCAGCCAGTCTGCAACATTACTACAC
GCGGCCAGTTTCGAACGTGGTGATACCAAGCGGACAGTTTTTCTGTTACA
AGACGGAGAGTATCGGTTGACAGGCAAAGCACACGTGGTTTTGGAAGACG
TTCAATTATGTTTGGTGCTGACAAACCTACTATATCAGATCCTCACATCC
AAAGTTCTCGATGATTCCCCAGACTCACAGTAAGCCATCGTTTtctttaa
ggccggtctccacttgcgcgctgcgatcgcaccttttggtttcaatcctt
tttgcttggaaaaaagattacgtcataaaaatgtagc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044759TCONS_00044759Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044759-proteinTCONS_00044759-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006160supercontigsc0006160:112..2298 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.07	3.13	3.66	3.3	14.3	9.43	6.99	9.94	4.74	5.67	8.31	5.58	8.25	9.34	5	7.77	5.11	5.05	4.75	4.61	8.37	6.29	4.17	6.74	21.56	22.49	4.39	2.86	4.39	4.88