XLOC_029307 (gene) - C. hemisphaerica

Overview
NameXLOC_029307
Unique NameXLOC_029307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_102:488769..492163+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029307 ID=XLOC_029307|Name=XLOC_029307|organism=Clytia hemisphaerica|type=gene|length=3395bp|location=Sequence derived from alignment at scaffold_102:488769..492163+ (Clytia hemisphaerica)
GTCATTGAGAGGTCTTGTAGGCGTAAGGTATTTTTATGCGCGTTGAAAGG
TATTTCCGACACTGTTGCTGTATCATATTTGACTACTAAACCAAGATTGC
AGTATTTGTATTTTATGTGTACCACAAATATTTGGTTGAGATTTTAGTCT
AACTTTATGATTGTTTGTGGAATTCAACAGTGTTGTTACGATCTTATCTT
CTAAACATCTTAAGACCGGCCAGTACTGGCCACATGGTATGAAATTGGCA
TCGTATTAAATTGACAAACTGAAAATAACAGAAATTAACAAATTGATTGC
AGAAAAATCTTTTACTGTAAAGACTAACAAActatatttttctttccaaC
TTTTATTTCAGCAAGAAGTGCAAAGTACTAGGATCATTATTGACATCTCA
AAAAGTACATTTGAAATAATGAAGGCCAAAGCGAAAATCGGATTTGCTGT
CTTGCTGGTCATTTTTATTTACACGTTGTTCCCTGCACCtttacttcaaa
aaaatttttggtctTCAAAGTCATTTGTTGCTTTGTCAACAGTCAGCGGA
GTCATCCTATTCGTATGCTCGATAGGAAATAACATTTTGCTGGTCAGTAT
TTTGACAAAAGTCCGTATTCCATTTGGGTCAGTAAATTATCTGATCATTA
TGATGTGTATTGCTGATATCGTGTATCCGGTCTGTTATTTACCACTGATG
TTGGGTCACACGTGGATTATGTATACAGACGTCTGGCTGGAAATTGACAT
TGAGTTATTTTTTGATTACTGGCGCTTCTTTTCTTCAGCTTATTATCTAG
CCGCTGGTGTTTCAGCGTCTACTTTCACTTTAGCCTGTGCTCAACGCACT
TACACCATCGTCATCAAAAAGCAAGACTACATAGCTTTTAGATACAAATT
TATAGCAGTTTGTCTTTCACTAGCCTATGGTACAATTTTGTTCGTGTTAA
ATCAAGAGTATACGGATTTCTCGCAATGGGTCCATTTGTTAGACTCCATC
ATGATTGTATTCTTTCCATTAACAATGAGCTTTATATTACTGGCAACTTT
GATTATTTACCAGAATTACGTACTACGTGAGCGTGTGAGTAGTCGAAATT
TGAACTACGTTGCTATATACGGTTTATATATCATCTATTTCGTTTGCTTT
TTACCATTATCAATGGCTGAAACACTTCACCTATACATGAATCGTGTTGA
ATTCGAACATTACGTAAGATTACAGTATATCTTACCTATTCTGTTCATCT
TAAAAAGTCCTTTTAATCTTATGATTGTAACATCCCTTGATAAACGATTT
ATGACAAAGCTGGAAGAAATTTTTAGTAAGGTTTGTTGCTGTCAGAATTA
TCCTCGTGAGCCGAACATCAATGCTGAGAACGAGACATTCCATATGTATT
CGGAATTACAAGAATTCCATTTATCGCAAAACCGTATTGATATGTATTCA
GATAGTTCTGCAGCGATGGCTGATATAAGACAACTGACAGATAACTCAGA
CCTACAAATGGACGAAACGGACTTGAGACAATTGATTATCCAAGAAAGTG
TTTAGTTTGTTTCAGCCCGATTTTTCCAGTAGGTAGATCCTGCGGTGGTT
TTATAAATGTGAGAATGAGGACAGCCGTATAAACTGATTCGAGAAATGGA
ACACCCAAANcccccccccccgggagacTAACAAActatatttttctttc
caaCTTTTATTTCAGCAAGAAGTGCAAAGTACTAGGATCATTATTGACAT
CTCAAAAAGCACATTTGAAATAATGAAGGCCAAAGCGAAAATCGGATTTG
CTGTCTTGCTGGTCATTTTTATTTACACGTTGTTCCCTGCCCCTTTactt
caaaagaatttttggtCTTCAAAGTCATTTGTTGCTTTGTCAACAGTCAG
CGGAGTCATCCTATTCGTATGCTCGATAGGAAATAACATTTTGCTGGTCA
GTATTTTGACAAAAGTCCGTATTCCATTTGGGTCAGTAAATTATCTGATC
ATTATGATGTGTATTGCTGATATCGTGTATCCGGTCTGTTATTTACCACT
GATGTTGGGTCACACGTGGATTATGTATACAGACGTCTGGCTGGAAATTG
ACATTGAGTTATTTTTTGATTACTGGCGCTTCTTTTCTTCAGCTTATTAT
CTAGCCGCTGGTGTTTCAGCGTCTACTTTCACTTTAGCCTGTGCTCAACG
CACTTACACCATCGTCATCAAAAAGCAAGACTACATTGCTTTCAGATACA
AATTTATAGCAGTTTGTCTTTCACTAGCCTATGGTACAATTTTGTTCGTG
TTAAATCAAGAGTATACGGATTTCTCGGAATGGGTCCATTTGTTAGACTC
CATCATGATTGTATTCTTTCCATTAACAATGAGCTTTATATTACTGGCAA
CTTTGATTATTTACCAGAATTACGTACTACGTGAGCGTGTGAGTAGTCGA
AATTTGAACTACGTTGCTATATACGGTTTATATATCATCTATTTCGTTTG
CTTTTTACCATTATCAATGGCTGAAACACTTCACCTATACATGAATCGTG
TTGAATTCGAACATTACGTAAGATTACAATATATCTTACCTATTCTGTTC
ATCTTAAAAAGTCCTTTTAATCTTATGATTGTAACATCCCTTGATAAACG
ATTTATGACAAAGCTGGAAGAAATTTTTAGTAAGGTTTGTTGCTGTCAGA
ATTATCCTCGTGAGCCGAACATCAATGCTGAGAACGAGACATTCCATATG
TATTCGGAATTACAAGAATTCCATTTATCGCAAAACCGTATTGATATGTA
TTCAGATAGTTCTGCAGCGATGGCTGATATAAGACAACTGACAGATAACT
CAGACCTACAAATGGACGAAACGGACTTGAGACAATTGATTATCCAAGAA
AGTGTTTAGTTTGTTTCAGCCCGATTTTTCCAGTAGGTAGATCCTGCGGT
GGTTTTATAAGTGTGAAAATGAGGAATCAGTTTATACGGCTTATAAACTG
ATTCGAGAAATCGAACACCCAAACAGTGTTTAGTTTTTTACACCCCTGAA
GTAACACGATGATTTAACTGGGCTAAAAACCCTGTTGTTAAAGACTTGGA
TTTCACACGAACCTCGGATCGGAAGTAAAATTTACCCCCAGGTTTTCAAA
AATGtaccactcgaaaacaaagaaatcgctagattcaatccgtcataaaA
AATACTGCGCACATTTTAAAGGCTTCACTCTTTCTttcctgagaaaggtt
aaagattcgcctctagccctttgggcttataTTTCATTTGGGGTCCATTG
ATGTATCAATCAAGtcatttttaaaactgtttAGTTACTAAagcaatttt
tctatttttttatactttttttccaactgattttgtagattttcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045857TCONS_00045857Clytia hemisphaericatranscript
TCONS_00045858TCONS_00045858Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045857-proteinTCONS_00045857-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:488769..492163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.13	0.1	0.84	0.76	0.08	0.25	1.08	0.03	3.92	4.14	2.54	3.5	1.13	1.26	2.3	1.63	1.63	0.94	0.88	1.1	1.16	1.51	0.1	0.07	1.81	1.24