XLOC_030050 (gene) - C. hemisphaerica

Overview


Name	XLOC_030050
Unique Name	XLOC_030050
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_122:66999..80778-

gene from alignment at scaffold_122:66999..80778-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_030050 ID=XLOC_030050|Name=XLOC_030050|organism=Clytia hemisphaerica|type=gene|length=13780bp|location=Sequence derived from alignment at scaffold_122:66999..80778- (Clytia hemisphaerica)
ACACTTAATTGGCCGGAAAGCCGATTACGACGCAAACACAAAAACAAAAA
CAATTCGCAAAAAATCGAGATTCCAGTGCAATATATTGCGTGAAGCTATG
AGTGCCTCCTCAGTCGCTGCGCTCCTTGCGGGGGCAATTATTCAGACAGT
CGACAACTGACAGAACAGAAAATGGAAGTAAATTTCTCAAGAACAAAAAG
TGCACTAGAAAAGCTTCTCGAAAAGTTCAAATGTAACCAGTGGTGAGTTC
AGTACGTACATTTGTTTCCAACAAATGGGCTTTTTCACTTGATTCATCAA
AAAAGTGACCGTAAGTTCCAGCCAGCCCAGGAGGACGACCAGCAGGCAAG
CCAAGGGAGGACCCTGCCGACGCACCGGACTTAATGAGCACCGGACACGA
GAAAGTCCGGTGTAAAATTAGAATTTTTTTTACCACGGGACAACTTCTAC
ACCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAGGATATTTTTTC
CCACCGGACAATCAAAACAACGGACATATGACCAGTCCGGTGCATCCGGT
GTTTCTTAATTTTTTGTTTCATAAATGTCCGGCGTCCAAAATTCCCTGTA
TACAACACCGGACTGACAACAGACTTATTGCGTCTGGTGTACGAGAGGAT
ATACTTTTGCCACCGGACAAATACACCGGACAGTCCGGTGCGTCGGCAGG
GGCCTGCCCAGGGCAGGGCGGAGGGGGGAGGGGTATTTAGGCAAATAGAG
GATACAGTGTGCACGCGCTTAAGGGTACCTTTTTTTATTTTCAAGGTCCC
GCTAAGTGTCGGAAAAATCAGAAAATCAAATTTCAGTCCCACTAAGGGTC
GGAGAAAGGGTGTCGGGCGGGTATAGACCTTTTTTCAAAGAGGACGTCCT
GTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGAGCCATGCAT
AATCAGTGCGTCTCAAACCGCGATATTTCGAGAGCACGGAAGCGCGTCAA
AACACCAGCTTTTTTAGAGTTTTGTCTCGTTTACCCAAACGCTGCAATCC
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GTAGGGGGAATTTTGTTCGATTTTTTGGAATCACTCGAATGTTTTGTTAG
AAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAAT
TACAATGTTTCCAATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAA
ATATGACGGTCTCAGGCAAAAATCATAGGGTTCAAAAATAATAAAAATTT
TAGCTCGAGAAAATGGAGACCTGTTGTATATTTTTGGAAAGCTCTCCAAA
AATTAAGATTAGAGATATATTGCAAGTATAGGTGATTTCTGTACCTAACT
CGAGATATTAGCCCTTGAAAACCGTGTTTTTCAGCCAGAAACAACTATTT
TGTCCAGTTTTTGCGCTTTTTGAACGGCTAGTTCGAAACGCAGGTCACAG
GTCACAGGTCAACAGGTCACTAGGTCACAGGTCAACAAAGTGCAGACCGA
AAAAAAGATAATAAGATCATAACATATACATAACATAACATCAATACATA
ACGCATTAAATTACAAAAAATTAATACATATTATTTAGATATTATAAAAT
GACAATTGAATAAAATAACAACCTAGTGACACTTACTTACAAAAATATTA
ACAGAATCATAAAATCTGATGCAAGAAAAGAGAAAAANNNNNNNNNNNNN
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NNNNNNNTATTTAGCATACCGAATGTGATGATAACAATATGGCTGGATAT
AAAATTACACCAATCAGAAGCTTGTGAGTTCTCTGAGAAGGTAGTTTTAG
AGTGATGAGTTTTATTATATGTAACCATCATATAACATTACAAACATTAC
AATGTAATATACCTGTTATACGTATAATATGGTTTTAAATTTTCTGGTCT
GCATCATACACGGCGCAAACTGCGAAAGATCGATAAAAGCACATGGTTAA
ATTTTGATGTTTGAAATGGTTTTATATGGATGAAATTGCTTGAGAATTAT
GTTTTTGATCAGTTTTGATAATTCTTTGTGTTTTCCAAACATTTTCCTCT
GCAATGACATTGATTAGAGTCAACCTGTCATCACTGACCTGTGACCTGTG
ACCTGTGACCTGCGACCTGTGACCTGTGACCTGCGTTTCGAACTAGCCGC
TTTTTGAAGATGTTTGGAGAAAGTTTGAAATATCAAATTCATAGAAAAGT
TAGTAGAAAAAATCCTGGAGAGTCATTTACAATCTATCCACGACCCGGAG
AAAGAGGAAACTTTCTAGTTGAATTAAAGTAAAGAAATTGAACTAAATCG
AACTTAGTTGAAAGGACTATTTGCCAAATTTGTGGAACTTTTCTTGTTGG
TGAATTCGTCGACCATTTCTTCTTGTCGAACTTTGTCAAACTTAATATGT
TTTGTTGACTTTAATCAAATACACACAATGATGATATAGCGACTTTTGAA
AAGTTTGATTAAATATAATATAAATTTTTTTATTTTTTTTAAAATTTATT
CTTTATTTAAAGTTGGGTAAAAACTGCTAGAAAATACAAAAGTAAATTCT
AATTAAGTCCAACTGTCGTAAAAATATTATATAAAAGCTATTAAAATAAA
ATCCTAAGAAAAAGAAAACGAAAAACTATTTAAATTTTTGCACGTGCATT
TGGAAAGTATATCGCTTTCGTTTATAGCTTTAAGAAAAAAGTTAAGATCA
TCGTTTGATTTAACGGAAGATAGTAGTTTATTCCAAGATTGATACAGCTC
TAAAGTCAAACGTATTGACTCCAAAAGCACTGTTATATTTTTTATATGAT
GGCAAGATTATGACCGGAACGAAGTTTATAACGAGATTGCAAGGTTGTGA
ATATACCATGCATAATACGTGACCCAAGGCCATGCGTAGATTTAAAAACT
TCAGTTATGAGGAGTTTAAGATTTCTTGCATGAATATCTACAAAGTTGCA
ATCTGTTAATAAGGTACCATAGTTCGAGATTGATTCATTTTTCAGAGCAC
AAAGTGCTCTGTGATGGCATTTCTCAATCAGGCTATTTCCCCCCTTTCCA
CAGAACATCCAAACAAGTGGGCAATAATTATAGGGTGAAAGAATATAAGA
GTTAACTTACCCTTCTTAGAACCCGGAGTTTTTGGTTTGATTTTTTACAT
AACTCGGTGATATGAGGAATGAATGACAGTCTGCTGTCAATTTTTATGCC
CAAAAGCTTAACAACATCAACACTTTTGATAAAATAAGTCATTAATGAAA
ATATTAAACAACAAAGGACCTAGAATAGAGCCTTGAGGTACCCCAAGTAA
GATATCAAGCCATGAGCTTAGATGTGACCCTACACGAACTCTATGCNNNN
CCCCAAGTAAGATATCAAGCCATGAGCTTAGATGTGACCCTACACGAATT
CTATGCTTCCGATTGCTGAGATAACTGTGCATTAGTTTAACAGCACTCTC
ACTGAGTCCGTAAGCAGAGAGTTTTGTTTAGCAAGAAGTAGATTATGAGG
CAAGCAATCAAAGGCTTTTGACAAGTCAATCAAGACTGCTCCCACTTTAA
AATTATTTGCTATATCACTTTGCCATTGTCTGATCATATTTAAAATGGCA
TTTTGAGTGCTATGGCCTTTTCTGAAACCACAAAGAAGCTTAGAAAATTG
AGGCTCGGAATGAACGTTGAGTTGATTTACAATCAGGCGTTCAAATATTT
TTGATACAACTGGGAGTAAACTTATTGGTCTATAATTGGCTTTATCCGTC
GAACAGCCTTTTTTTAAACTAGGAATAATGTCAGCAAGCTTAAGTCGATC
AGGAAAAGTTCCAGATTCCACGCAATTGTTAAAGCATGTGGTCAAAAATG
GTACACAGGTATTTGCAGCAATCTTAAGCATACGAGTTGGTATTGTCCAG
CTTACAGATTTAGTTGTTTAAGCTCAAAATGACCTTGAGAACTTCAGTCT
CTTCGACCTTGGTGAAATCAAAAAATTGGTCTGAATTTCGGCTTCGATTT
ATTTCTTTTAAAAATACTTGGATGATTTTGAAAAGTTAACTCAGAAATAT
CATCCGAATTCAGGGATGTAGATTGATTTGACTAAGATGGAATTTCAAGA
GTTTCAGTGATCCTATTAAAATAAGTGTTAAAAATATTGGCAACACGTTC
ATTCATCGTTCATCGTTCATCTGATGTATGTAAAACATCATTTTCTAGCA
GTTGAATCTTTCCTTCAGCTTTGCAGTTTTTATCTGAAAATTTAGTTTTT
ATGGCATCCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNGGAGAAAAGTTTCTTTGCTTTTTTGTTTAATCGAACAACCAAA
TTTCTCTGGCGATTGTAGATAGCTTTATCCTCAGGCTGTTTAGATTTTAT
AGCCACTGCTTTGAGATGAGACCTTTTCATGATAGCCTTCCTGAGGTCTT
TTGTGACATGAGGTTTGTTATTTGCCCTGAGAAATTTGGTTTTCAGTGGA
GCATGCCTGTTTACAATATCATTAAAGACATTTTCAAACTGATCGTAATT
TTCAAAAATGTTACTGGAAATGCAATGTGCTAGCATATAAAAAATTATTT
TTATTAAAATTTTTATAATCTCTATATTTGATAATTTTCGGAGATAATTT
CGTGTACTTGGTCTTTAAGCACTGCATAAATTAGCCGATGGAAATCACTA
AGCCCTGTTTCTACCGTGCCTGAATTTTTAGAAAGATTTTTAGAATTTGT
TAGGATAAGATCTATACACGTTCCTTTTTCAGATTTAAAACAGGTTTTTG
TTTTGATGACATTCGACATGTCATTCAGTTTAAGGAAACGTGCCATTTTA
GGATCGGTAGGTTTGAGGTTAAAATCTCCAATGACTATGATGTTATTATA
GTCAAGCGACCGTCGTACGTTATTTTTTCTAATTCACAGTTTTTCACTTT
ATTTTAGTCAGAAGATTCTTTCAGAGACCTGTTCTTTCGAACTTTGTGAT
CACTTCTTTTGCAGGTAAGTTTTCTTGTTACTTCTTTTGTAACAAAGAGG
ATCCAAGCCTGCCAATGCTCATAGTTAAGTCGTGAGGCTCACGTTTTTTA
ACCTAATTTATAGAAGGTCTTACGGTATGGTTGCTATCCGAAATCTCACT
GTCTTTCAGAGTCTTCCTGCTTGCAAGTGATCTCTAAAATTTCTAAATTT
GATCATTTTATACTTATAAGAACGATCAATAAAAGCTCCAACAATATTAT
TATACAAGGATAAGCTGATAATGTCTTGTCTTCTTATTTTACAATTTTTG
TCCTTTTTTGAGAAAAAAACACATTTGAAAAAAGAATTATTTGAATCCAA
AGACACTTTTCAAACCTTTTAATGAGTTTGTGAAAAGTTACGCATTAAAA
TAAAATCTCTGAGTGCCTGAATCTCAAGGTTTTGAAATTTTAGAGTTTAG
CATGTCTGTATATAATTATTTTCAATCAGTTTCAATTAAGTAAGAATATC
TTTCATATTGAAAAAAGACTAATAATAATAAATGTGTAGCACCCCGAGAT
ACTTCAATACATTCATCGCAATTCATTTCTTATGATTATTTCTTGTTTCA
TACAGACGGTGTGCTAATTCACTGGTGGATGACGGGAAACCATGCCCGAA
ATGCAACACGGTTCTTTGGAAGGAGCACATGCAAGAAGTTCATTGGGTCT
CCGAATTCCTTTCCGTTACAAATCGTATCAAAAATGTCATGGACGGTAAG
CCGAGTAAGTTTGACTATAGCTTTTGATAGCTTATGTTTTTACGTATGAT
AAGGAGTTGACAGTCTTGCGATTTAGCCTTTTCTCGCCGGGACGAGATGA
AGTTTTAACAAACTTATTTGATTTGGTTGGTGGTTAACCCAGTAATAAAA
CAATTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCTGTCTGT
GTGTGTGTGTGTGTGTGTGTCTGTCTGTCACAAAAACTTTAGGGCAGCCT
GGAGACTTCAAAAATGGTCATATTTAGCTGAAATTTGGCACACTTGTTCC
TTGGGTAAATATCTGGGGGTGTTTTTTTCATTNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCTTGATTTTTGGGGCCTGGGGACGAGTTT
TCCGCCAAAACGAGGCTAAAACTTTAGAGCAGAGCCTACATGCCTCAAAA
ATGGTTGGTTTATCATAGAAAACCACATTTTATCACTTTCTTTCAAGAGA
TGTGAGAAGATGTATCGCATAAAATTTGAGTAGCCACTGAACTTCACTAA
ATCCATACAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCC
ATACAAAAAATAAATTTTCAACTGCTCTGATGGTTGATAAATTTAATTTT
TTAAACTTAATGTAATACTCAATAAGCTAATATTTACTTACCAAAGACAA
ATGTCTTTAAAGCCACAAAATTTCACATTTTTCTCAACTTCAGTTGAGCT
AGAATCTGACAATGTATGTATGTATGTATGTATGTGTGTGTGTATGTATG
TCTGTCCGAAAACTTTGGGGCAGGCTGAAGACTTCAAAAATGATCGGGTT
TGGCTGAAATTTGGAACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTT
TTTTCATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTCACGAGTTTCG
CCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATC
GGATTTGGTTGAAATTTGGCACACTCGTTCCTTGGGTGAATATCTGGGGG
TGTTTTTTTCATTTTTTGAAAATTTTCATTTTTAAGGGGGTGGTCACGAG
TTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAA
TAGTCGGATTTTGTTGAAATTTTGCACACTTGTTCCTTGGGTGAATATCT
GGGGTTTTTTTTTTCATTTTTTGAAAATTTTCATTTTTAAGGGCGTGGTC
ACAAGTTTTTATTATTTTATAATTTCCATTTTGAGGGGGTGGTCATGAGT
TTCCAGTTGAAATTGGTTACAATTTTACAATTGGGCCTACGAATGATTTA
AAAACACTGAAGTTGAGCCCAGTGCGGTTAGCACGTTCGACAGTGTGGTT
ACTTTTTCTAAAGAACACGTCATTTTTTTACTTCAAATGACCAATTATTA
GAGTATTTTATAAAAACTCCATCTGCTTGTTTTGGCCAGTCGTTTGCTTG
TTTATTATTCCTCACTTTGGTGACCAGGAACTGTTGGATTTATTTTTACT
ATCTTTTACAATTTTAGGTGAAAGCAATGACACAGTAGTAGAAAAGGTAA
AACTTGTCCCATTTTTCTGACTTGTCTTTTTTTTAACGACAATTCAAAAC
GATACTAATTTTTCTCACCAAACATCTCACCAAACAAATTTCTTTACTCT
CAATCCGTCTATTAATTACTACGATTTGACAAATTTTTTCCTATTTTTAG
GTTGTCTCGTCATCAGATACTACACCGAAAACATTCACCAAGGTTCAAGA
CGTTTCAACCAAAGAGATTTCTGTAGACAAAGAAGAGGACGCAACTAAAA
CTACACGTACACCATCTTCTGTCACCAGTGAACCTCTGAAGACAAAGCGA
TCTTCATCGTCTCGACGCAGAACAATAGCTATAAAAGATTCCAAACGTCG
AAAATCATCTCAAGAAACGAAAACATCTACAACAAGAAGTAAAAGTGATG
GAATTTCCTTTTGCTTGTTTTTAAACTTACAAGATCTACACAATGTACTA
TGATATGAGTTGATAACGTCGAGTAAGGTCGACTTCCATTGCGTTTCAAC
TACAATAGTTCAACGAGCTCACAACAAAAGTGAGTGGAACGGACTCAGAT
TGGAATTTATTACTTTCGCATAACTAGTACACTGCTCTATCAACTGAGCT
GCTCATGTTTACGTAGATCAACCCAATTTTCTTTTTGTGTTTAATTTCAG
AATCAGATGCCAATGAAAAAACTTCGAAAACTCCGAAGAAGAAGAAAATT
CAACTGGAAAAGAAGAATATGAAAGGCGAAACTCCTCTACACGTTGCTTG
CATTAAGGTTTAGATTTAATCAATAATAGCACTTCTTTTAAAATTTCGAA
TATCTGAGTTCAGTATCTTCTAGCTTCTGCTTCAGAGCAATTACCCGGCT
GTTATTTTAATGTTCTCTTACAAAAAATTATTTACAACTATTTTTTTTTT
CAGGGCGACAGTGACCGAGTAAAGGAACTTCTTGAGCTTGGTGCGAAACC
AAATACAAAAGATTTCGCTGGTTGGACACCTTTGGTAAGTAGACCTTAAC
ACCCCTTGATTGATGACAAATTATGTGACGTGCTGCGAAACGTTATTGAG
CTTTAACCCAAGTAGGCAATTATTTCAACAATAAAATAATGATAACACAC
CGGCGGTACCAGTGAAAAAATATGTTAGAAGGTATGAGGAATAATTGTTA
AAAAGTATTTTAAGGATGAATATCTTTTAGGTGATTTTTCATTTTTTCAA
CCTTTTTCTTTCCCTCCAGCACGAGGCATGTAACCACGGTTTTACGGAAG
TTGTTGAATTGCTTTTGCAACATGGCGCATATGTTGATGACGTTGCAGGA
GATGACATGGAGACACCCCTTCATGATGCTGTCTCTAATAATCATATTGA
CGTCGTCAAATGCTTGCTCAAAACAACTAATGCACCAATAGGAACAAGGT
AAGATTCTTTTTTCTCTGAAATTTGGCACAATTGTTCCTTGGGTGAATAT
TTAGATTTTTTGAGGCCTGGGTACAAACAAATCTTTTGTTTTGTTTTGCT
ACAATCGGGCATATGAATAATTTCAAGCTTACTAAAGTTTTAAGCCCTGT
GCATTCCGCGCGTTCGACTGCGTATGCTTAGATCTTTGTCTTTTTCTTTA
GAAATGGTCAAGGACTTTTACCGAAAGATTGTTGTACTACCGATGAAATG
CGAAAACTCTTCGAATCAAGTTAGTCATTTCTTTCCCCCAAAATTGTATA
TAAACTTATTTTACCGAAACATTTTTAATAATAACATTAACACTAAAAAT
CTTCACCAATTCATTTTCCCAAGTCGAATTGTCCTGTCATTGTTTCAAAA
AGTCCTTTGCTTAGATAACCTTTCTATACA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00047132	TCONS_00047132	Clytia hemisphaerica	transcript
TCONS_00047131	TCONS_00047131	Clytia hemisphaerica	transcript
TCONS_00047130	TCONS_00047130	Clytia hemisphaerica	transcript
TCONS_00047129	TCONS_00047129	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00047130-protein	TCONS_00047130-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_122	supercontig	scaffold_122:66999..80778 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.76	14.98	20.29	28.79	19.16	15.63	18.69	18.64	21.31	18.84	19.54	18.58	15.71	21.1	11.14	10.81	16.23	13.67	9.75	8.93	9.07	9.59	22.64	29.8	37.1	35.94	7.63	6.65	13.7	16.09

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XLOC_030050 (gene) - C. hemisphaerica