XLOC_033796 (gene) - C. hemisphaerica

Overview
NameXLOC_033796
Unique NameXLOC_033796
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:110304..113972+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033796 ID=XLOC_033796|Name=XLOC_033796|organism=Clytia hemisphaerica|type=gene|length=3669bp|location=Sequence derived from alignment at scaffold_233:110304..113972+ (Clytia hemisphaerica)
CGCAAAGAATTGTTTTTTGGACCAAAGGCAAAAGGAGTTCAATAcaatga
aaaagattttgacTTAATAGTTGAAggattggaaaaaagattaccgaaaa
atgtaaatgtttttcttcttcatccaAATGATTGGAAGAAGTGTTCGAAG
ATggaatttttcggaaattttgaagAGGTTTATTGGTGGAGATATGAAAA
CATTCCTCAAGATTATTATTTTGGTGGAGAATACNTATTGGTGGAGATAT
GAAGACATTCCTCAAGATTATTATTTTGGTGGAGAATACTCTGTTATTAT
GCTTGCCCAATTTGAGTAAAGAAGGACGTACCTTTTTCACATAAGATAAT
CCCTGGGGGTTATGCAAGACCTAAGACTTTTTGACTTAGATTTGACAAAC
GAGAAAAATAAAGTACATCGATATCACGGAAATAATGGTTTTACATTGAT
GGAAAGGTGCAAACATTTTATTTCAAGACTAAATTTCATTTCaagacaaa
atttcataatttttccaaaatccagataatatattttatgagaatattta
tgataaaattggcaaaaaaaataagaataaggtAAGAATACCATCATCAT
GGATCTTAGCCTAAGAATGCCATGAACATCGGTATTTTTTAGTCGGTATA
TGTtacacttttgaaaaaaacgtgCATTTTTGCAAATGCAAAAtgcaaaa
ttcttaaaaaggcTGCAAAGAAACTGACGTCTTTAAGGGTGAGAGAATAC
TGCCGCTGAGCAGTATTTTTCGTTTGATTTGTTTTATGTTCCTTTTGTAT
TatagcattttcattttctctagGTTAATNtttgttcttataaaaaaacg
tgtagaacaacaaattaaattggtctcgcctaagtaATAAAATGTGTAGG
AAATAAGAGAATTTTCGATCtccattttttcttcaattttcatcttcatt
ttcaaatttttcaggaaattctAAAAATACTATTTTATAAAGCCACTCGA
AATTGTCTCTCCAACGATGTATTATCTTTCATTAGATCTCTTTTTCCTCG
AAAGcaatgtttgaaaaagtacAGACTGCAAATTATTTCAGAATAGACTT
TTGTAAGTAATATTTCTTACTttttgatccgtctctttagttgttGAGCA
TCGAGCAGagagagaggcatcaagtaccaatttgggaatctttggtttAA
CCTAGACTGCTTGCATCCAcaaacggattcgtgctcctcaTAGGGGATGC
TTGATAAGTGATATTTCCTTTGTCTAGAAATTTGCcattaaagacatttt
tagctggtgAGGGCTTACAAATATAAGATTACGTATTGTTTAATTTCTCT
GTGAAGCACCAAATCatcgttttgttgtttttcttcctccttttttgtgt
tatattgagattttgtaaaatatgAGAAATGAGATTTAtcaacacagact
ctatccgccgcgaaacatattacgtttacgttttatataatatacaaact
atgttatatcataataacatattatacggacgatagcatcatctaagttc
gaacatgattctgagtagagggttcgttgttgcgtgtgtttaacacaatg
attgtttttacaacagacAATAGTGAAGTTAAGttaatcggtaaaatcac
gacgataACCGAacatttaacaggctagtgactttcaaccaatcagattt
cgtattttcactagactattacatttttcgtatgtcgtcgtgattatcct
ggtatgcttaacctcaatattatgattaaaaagcattaactttctttaca
attttcatgacgttactATATGTACTCATTAATCAAAGAAAGAGATTAGC
ACGCTCATAAAACAAACTTAATAACGACAATACAGATCTATTTCATCATG
CAAATATCTAATCGCTATATATTGAAGCTATTATTGAGCTCAGCAGTCCA
ACGAGCATAATgcttattcttttattttgttttagaacTTCATAATTAAA
TACACTTCTATCTGTTTAATCAACTCAAAGTAACGTCATCATGATGGAGT
TTTTTAAGTTGATggagtgtttttaaattgatgGAGTGTTTTTAAGTTGA
TTTTGTGTCTTTTGGTTTTTACTTGCAGTGTAGTATTTTGTTTATTGGTA
GTATCTACACACAGTTCTCGAAAGCCCTTTTGAAATATACTTTAAGTAGA
TTAATTTTCATGTTGACTTTTTTTCACGAATCTGGAATCTAAAAATTTCG
CAAGGATCAAAGTTCGCGAATCAGCCCtgttttctttaatttcttttgag
gttttgggaaaaattaggatttcaaatatttcgcgtggactaaatttcgc
aaaaatcgcCAAGATTAATCCACGTTAAATTTACTCCACTGAAAGCAAAT
TTCATAAGAGCTTTCGCAAATTAAACTATACTTTAGGGCAAGTTAAGCAA
AATGAATGAAGCACACAGCTCAGCTGATCGTGAACGAACAATTCACGAAG
GAAACCGAAGCAAGAAATTGCTGAATTGAGagtgaaatatgaaaaagaga
ctttggaaaacaaaatcaaaactctTGAAATGCAGAATGAGATACAGACA
CTCAAACATAACAGTGAGATTGCTAAATTGAAGGCAAAGCAGGAGAAAAA
CGAAGATAAGGTCTTTGTAAGCTTGATTGAAAGTGCtttaaaagaagaaa
accaAGCTCTCAAGAACGAGATACAAACACTCAAACATGACAATGAAATT
GCTAAATATAAGGCGCAgcaggaaaacaaaaataatggaAGTCAAATGGC
AATAGAAATCGAAACACTCAAAATTAAGAATCAAGCTCTCGAGAAAACAG
TCGCTGAAGCTGGTctgaaaaatgaattcaaaGCCCTTGAAAATGAGATG
GGCGGCTTGAAAGCTCAAAATGACAAATTAGAAAAGGAAGTTCAAGccct
taaaaatggaatagaagGCTTGAAAGTTGAGTTGAAAGATCAAACCCAAA
TTCAAAAAGCCAAGCTGGAAAATGAAGTTCAAGCCCTGAGAAATCATTTT
GaacatttgaaaacaaaagttaataaAAAACAAGAAACTGAAGGTGCTCA
AAAAGCTGTGCAAGAAAAAGTCCAGAAGCCTTTGGGCAATATACCTGACC
AGTTTTTCGAAGGAGCAGAAAAGTTTTTAACGAATTACAATAGAGGGAGA
GAAGACTTTATCGGTGAAAATTACAAATTGTGGTATGAAGATATGTCACG
TTTGATGAAGAATCGTAAACAATATGTCgatcaaaagtttgttttgattc
gtaAAGACGTGAAAAGGTATCACGAATATTTGTATTTTGGATCAAAGGCA
AAAGACGTTAAATACAATGAACAAGATTATGATCTAATAGTTGAAggatt
ggaaaaaagattaccgaaaaatgtaaatgtttttcttcttcatccaAATG
ATTGGAAGAAGTGTTCGAAGATggaatttttcggaaattttgaagAGGTT
AATTGGTGGAGATATGAAAACATTCCTCAAGATTATTATTTTGGTGGAGA
ATACTCTGTTATTATGCTTGCCCAATTTGAGTAAAGAATGAcgtactttt
ttatataagataaaCCCTAGGGGTGTCATGCAAGATCAAAATACTTTTGA
CTTAGATTTGACAAACGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053538TCONS_00053538Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:110304..113972 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0	0	0.28	0.34	0	4.24	3.66	0.64	1.06	0.77	1.01	2.7	1.4	2.16	1.7	0.57	1.36	1.35	0.85	0.74	0.36	1.16	1.32	0.82	1.21	0	0	1.97	0.86