XLOC_033818 (gene) - C. hemisphaerica

Overview


Name	XLOC_033818
Unique Name	XLOC_033818
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_233:976251..984746+

gene from alignment at scaffold_233:976251..984746+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033818 ID=XLOC_033818|Name=XLOC_033818|organism=Clytia hemisphaerica|type=gene|length=8496bp|location=Sequence derived from alignment at scaffold_233:976251..984746+ (Clytia hemisphaerica)
CATTACGTTACTGGCAATTGTTGCTGTTTGCAGCTGCACAGAGATTTTGG
GTAAGATGGTTGcaagcattgagtttaaagcccgaagggctagagtagaa
tctctaacctttctcaggctagaaaaagtgaagccctAAAAAATGTGCCG
TATTTTTAAAGACAGATTGAATCTAATCtagcaatacacctttcccgtaa
ttcgtaaaactaatgcgcgcgcattattttgatgctctccactgtttggt
ctctggaggtaaacaaacccgtttttgcttGCGTTCCCTTAGCTTAGGgg
aagttggttttttgagcttttcttaagttctgtgtCGAACACAAaacccc
ctcaaattttagtatgttcaatctattcatgatattataccaccctgaaa
atattttgccaaaagaaggtcgctgtcaaaagttagaggctcaaatccca
ctttcccttttttcgaaatttagcggtaaattttccacagatttttggtt
ctagactggataaagtctatgtaaggctgaatgtacctcgaaacccatat
ttgatgtatttttataaattttaccagcttttttggcttttttcgacgaa
tcttctgccttttattgaaattcaatcctcctttatataacaaacggtca
attagacagctaattatcatttttaatgactgaaacgaaaatactgatgc
atcaggcgaaccctaaaaatatttttgtttccggtccaccgggtgacaAA
AAAAACACTCACCTTGCCGgccgcaaaaatttttttttttctaaatttcg
atcccaaaactcgattttttaaagcactcgtagaagttaaaatgatggtc
tttctttaccttaaatctgtagtaacttgacaccgctacaggctttggca
taagaaaaattcacgtgtgatcatcgcacgcctagattttgatttacagt
ggtctaggcgtgcgattattcaaatacttaattttcatcgtttatatttt
caattgtgttACAATATCTCTCAGAACTGgcactctctttcattttgaat
atttatcttcaattgccaaggctccaaactgtgattacgaagtgaacttt
tttgagaaaaaagtagagtgagagaaacatttccccaattttttaaatcc
tcactttgtgaatgtttctttttattttactcacaagtcagcatgattcc
ttttataaaaacaaagctgtttacttactgaaaagtccccactttgtgaa
tgtttctatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTCTTTATAgcataaaaacaaagcttttctcATGCGAGTGCGCTTCT
CGTGCTAGCATAGAGAAGCTAAAACCTCAGGATAAGAGTAAGCAAACATG
ATAGCTATTTGTGTTTTTGGCTCTGTTTAACCGTTTAACACTCACACTCA
TAACTGATTACAATCTTCTGGTAtacaaagaacaaaaagtgtcaattcaa
aaaattaTCAGCTGAATGGGGGTAagaactcaaagcaatttctcaagggg
acctaactcgttgggggcaccatgcttcaatgggggcacctaaaaagtgg
gctgaaaccatgtttTATCCAGGGAAACGCTGTGGcagcaatgttttgct
ttagtgagattgaacattttgttgttttgatttgatcaggggaaatttct
gtacaaaccaaaatatggcttcgttggaataccggttgaaacacttgtgt
tttagggtacctttttgggagattttgggaaaaaaatagaaaattttgag
tataATCCTGGAGTTTTTTAGTTCCGtgccattcagggtcacttttcgca
aatttttaaaatgtatgTGCGTCGTCCGACGGGGGTATATAACGAAAATT
TTCTGGATTGGCCCAATTACTCCAccacattactttccctcagccaattA
AAATGTGATATAagttatcttgtctctaggtaactgctgtgaagtaatta
gttattcaaaagactgttgTGTTCGCCAAAACATCTATCNCTTTCTGGAT
TGGCCCAATTACTCCACCACATTAATTTCCCTCAGCCAATTAAAATGTGA
TATAagttatcttgtctctaggtaactgctgtgaagtaattagttattca
aaagactgttgTGTTCNCACACCATGTACATACACACATGATCTTTCATA
TTATTCTAATAATATCTTGATTTAAACTGATTTTTACAAGTatcaaagca
aattttcaagGACCATGAAGAAGACAAATATTGGAGTAGCAGCTGCCAGA
TGCAGGCTAAGAGGCTCACAAAAAGAGTTAAAAGGTCAAGGTCCCATGGT
ATATTTGATGAGAAGAGATGTACGTGTAGATGATAACTGGAGCCTTTTAC
GATGCCAAGAAGAAGCTCGTCCAGTCAGAGTTGTTCACGTAGTGGAGGAA
AGCCATCCCACTTATCGTTTAGCTTGGTTCTATGCTAAAGGTTTGGAAGA
TGTACAGAATGGtttgaaaaagcttaaaattccATTTGATACAGTACCTG
ATATCAAATCATtaaatgattattttgttgaaattgatccaTCAGGCATA
GTGGCTGATATGCACACCTTAAGGGAATTTGATCTCAAACCTGTTATTGA
TATGTGTAACAAGCAAAAATTACCACTTTGGGAGGTGGACAGCTACAATG
TCATTCCAGTATGGGAAACATCAGATAAACAAGAGTATGCAGCTAGGACC
ATAAGGTCtaagataaacaaaaaacttGATCAGTACCTTACTGATATTCC
TCCCACTTCTTCAAACACTCAAGATTTGAAGGGTTATGGTAAAGAGTTTA
ATGCCATAGAAATGCTTGAAGAAAGGTGGAAGCAATCAAATGAAATACAT
TTGAGATTCACTCCTGGTACTAATGCTGGTAGGGAAGCTCTTGAGGAATT
CTTGAGCTCTCTTGCTATTTATGACAAACTGAGGAATGACCCTTCAAAGG
ATGCCACTTCTAACCTGTCTCCTTGGTTTAGACATGGTCATTTGAGTAAA
CAAAGAGCTGCATATGCTGCACGAAAAAGCAAAGGTTCATCTGATGGATT
CATTGAGGAGCTTGTAGTGAGAGGTGAACTTTCTGAGAACTTTGCTTTTT
ACAACAAAGATTATGACAACTTAAATGGTGGTCCAGCTTTTGGAAAGAAA
ACTTTAGAGGATCACAGGAATGACAAACGACCTCACACTTATTCATATGA
GAAGTTTGAAAATGGTGCAACACATGATCAACTTTGGAATGCAGCTCAAA
AGCAGTTAGTGAAGGAAGGAAAAATGCACGGTTTTATGAGAATGTACTGG
GCAAAGAAAGTCTTAGAATGGACACAATCTCCTGAGCAAGCAATTGAATT
TGCTGTGCGACTGAACGATACTTATGGATTAGATGGCCGTGATCCGAGAG
GCTACAATGGAATCTTGTGGAGTATCACAGGTTTGCATGATCAAGGTTGG
AGAGAACGTCCCATTTTTGGTAAAGTGCGATACATGAACTATGATGGTTG
TAAAAGAAAGTTTGATATCCAATCCTACATCAAACAATATCTCAAGTAGT
TGTTTCTGAGTTTTATCTTTGAAGTATCAATTACTTCAATTGTTATATTC
ATATTTGTTATACGAACCATTTTATTTTGAACTTGACTTCTCGCCAACTT
GTTAATTTTAGTTCCTAAGGTTTTTAATGACTATCATATCAAAGAgataa
tttttacaaaatttcatctGCTTCGTTTTCTTGGAGTATGTCCTGTCGAG
GTGATCTTTTACATGTACCCGAACTAGAAAAAAATGCAAATCTCGACTTT
GTTATTTGGACAGGCCAGGACAGGCTGAATAAACAGGGCGACATTGGAGT
GGCGCTCTTATAGGTTCAGAACTATCAACCAGTAAAAAATCTAAGCGATC
ccacatttttttatttctatcaGATTTACTAAAGTTTTCACAGATGACCC
AAACTAATTCTCATACTTGGCTTTCTTgggatttcatatttttatctTCA
CACTaacaattttctaattttatttattttagttttgacaAAATCTTAAT
GATAAAATGGTTGACCAAAAGAATGAATGTGCAATCTGTTTAAGTCCCAT
TGATAGTAAATGTACCCTAAAATGTTCTCATAGTTTTTGTGAGTTGTGTA
TCAAAAGAATAATTAATCATTCTTCAAAAGTGAAATGTCCATACTGTCGA
CAAGACTCAGAGGGTTCTGAAATCACTCTTGAAAATGGAGAAAGTGGTGA
GTCACTCTTTGCACTTCCAACCTTAACAACCATAGCTGATGGAGTTTATG
TTCAAGGTGGTACCATTGGATTAGCATCCTatcattttggaaatctttcg
ACCCCATACATTTCCTATGAAAGTCCCCATTGTGATGAGTGGCCAAATTT
GGAGGATGGCTCCAGACCAGCTCCAaaaaagtattttgtgcaaCATCATT
ATGACCCTCAAACAAGAACATTTACAGGAAATATTGATTGGTCACCAACT
TATTGGCAAGGTGATGTGTTGTGGAAATACACCATGGAATTTTCAGAGGA
TTTCTGGAAAATTGAATCTGGAAATGTCAAACATTTCAGCGAGATCAATG
GTGCAGAACAAGGGGAAAGTTTGTTTGGTGTTTCATTGAAATATAAGAGA
TTGAAGCCAGGATATCTTGAGGAGGATGAAGAATAAATTGCAAACATTAT
ATTATTTTAACTTTTCATTATTGGTAATTTTGCCTTTATAATATTGTGAT
TGTTGAAGTTTGTGAGTCATTTTTTGCAAAGTTCCCTCATAGGAGAACCC
TTCGAAAATTGATTCTTTATAATGGTGATGAATAGCATTTATCTACAATG
TTTAAGTGCAACAAGTTTACAAttaattttctctttgaaaaagtCATTTT
CTACGAGTTAGATAGCTGCAGAGGGTGACAGGGGTTTATTAAATCATTTT
GCTTGCTTTAGCCTGGTGCTAATTCGTCAGAGTCTTATTATCTTTTAACT
CTATTATGTGTAAAATATTTATTaattataatttcttttggtttatttgt
aagaattcaatatatttttaatCTTAAATGAGGCCCCTCAAGTGGACCTT
TAATTCACACTATCACGGAAATTTATTTGGGAATTTGTGTATTCTCGCAA
ACTTTTCTTGAGTTTCACACAAATAcccaatttttctgaaaataataaag
tttCTCGGGAAAATCAGGGAAACGTTTGAAATCTGGAAATTTACGCATAA
TCAGCGGGAAAAGAGAAAATTTGCATTCAAAATAGTGCAGATTCAAGCAT
TCActcaatcaaaaagtggattttcatacattcacgcaaccaaaaaagtc
CATTCATGCTTTCACACAACCCGCTGGGGGGAGGGGGTAGCTTaaattat
ttttagatttttttaatggACGGACACACGTCATAGAATTCTTTCAGttc
tttcaattgtttttgtaGATAAGagtatgtttttaatttttatttgcaTC
CTATGACTACGtgaaactttttataaaaaaaacttgataaaatATACttg
ttacaaattttttttttgataaataaaaatatatatatgtgCAATTCCAT
TTTTAATCATTTGCGCTGGtgctaaaaaactttttagtaATCTTTTTCTT
AAAGATTATATACAACAGGTTAGATCTGGGAAAAATGTGATctatttcaa
ttgttttataggttttgactttttattcatatttcttTCAGTTCCAAAAT
GAcggataagaaaaatgaatgttGTTTATGCAAGGGACCTATTAAAAACA
AATGCACTTTGAAATGCTCTCACAATTTTTGTAGGGCGTGTATCAAAAAG
GTTATCAACCATCCTAATCAGGTTAAATGTCCCTATTGTCAGCAAGATTC
TGAATCATCAGATATTACACTTGAAAGTGGTGAAGATGCTTCAATATTGT
TTAATGTCAAACTAACAAACATACTTGGTAGCATTTACATACAATGTGAT
ACCATTGGTTTAGCATCCTACCACTTTGGAACTCTGTCAAACCCTTATAT
ATCATATGAGAGCCCTGAAAGTGACGAGTGGGAGCTAGATGATGGCTCta
gaccctgtcagaagaaatattttgagcaCCATCATTATGATCAAGAATCT
AGAACCTTCACTGGCAATATTGATTGGACACCAACAAAATTCTACGGTGA
AGCATTGTGGAAATACACAATGATCTTTTCAGAGGATTTTCTCACTATTG
AAAGTGGAAATGTGCAGGGTTTTAAAGAAGTCAACGGGCCACCTGATGGT
GAATTGAATATCTTTGGTGAGGATCTAGTTTATGAAAGAGTTTTATCAGC
AGATTTTGATTCTGATGATGCCAATGAAGATTAAACAATGAACAGGGAAA
ATATAATATCTGGGTATTTTTGTAAAAAAACTTTCACTATTGTAAAAAAG
CATTATTTATCTATCAATAGAAACTTTATGATTTTGTAAATTAACTTTAA
TTCTCTAAATTATTATATGAACATCAAACTTTTTATATCAATTACTTTTC
TATAAATTTTAAGATACAATATATAAAACGCTACAATAAAAAATATCAAA
AATGAAATTCTTCACTAGCTTCCTCTTTATTTTTTAGCGATGTCAAAGTG
ATTGTTACTGAAATGGTATCTATTTTTTTCTGTGTTTCATTTCTATATCT
AGTCTTTTCTAGGCTACGTCATATCTTCCTTCGTTTCGAGCGTAAAACTC
CTACTCTTCGGGCTATGAGCACTGCTCTTGTTTTGAATATTGAAATTCTC
CCGATAAATGGCATGCGCACTGAGGTTTTAATGAAACAATAGAGAGTTTC
GAAACCTAAGCCAATCAGCTGTGTTTTAAACATTCTTTTATTTAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053593	TCONS_00053593	Clytia hemisphaerica	transcript
TCONS_00053594	TCONS_00053594	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053593-protein	TCONS_00053593-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_233	supercontig	scaffold_233:976251..984746 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.09	18.86	15.86	16.74	11.28	9.13	9.62	9.88	10.07	8.57	9.76	7.56	10.22	7.84	7.94	8.58	8.75	11.45	12.42	13.13	12.35	11.79	24.48	23.06	11.49	11.44	16.49	13.4	17.42	16.26

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XLOC_033818 (gene) - C. hemisphaerica