XLOC_034059 (gene) - C. hemisphaerica

Overview
NameXLOC_034059
Unique NameXLOC_034059
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_237:118155..126033-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034059 ID=XLOC_034059|Name=XLOC_034059|organism=Clytia hemisphaerica|type=gene|length=7879bp|location=Sequence derived from alignment at scaffold_237:118155..126033- (Clytia hemisphaerica)
ACAACGACATCATCACCGACATCGTCACCGACAACGACATCGTCACCGAC
AACGACATCAACGTCAAAACCTTCGACAACCCAACATCCTTCGACAATAC
ATCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGTCAATCTAT
TCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGGTGGGTTTAA
CTTTTTGGGTACACGTTTTCTTTCATAAGAGCAAACTATATAAGAACATA
AGGCTTCGATGGCCAAAATCTTAAAAACCTGTTAAGAACATTTGAAGGCT
TCGCGGACTCTAAAACACCCGATTTCTTAAAAACTGGACAAAAATACTCA
AAAATTGGCACAAATAAAAGAACATTTTAATTTTGGGTGGGGGGGGGTCA
ATGTAAAGTNTACCACGAAAGTCGCAGAAACAACTTCACCAGCTACAACA
TCAACGACACCCAAAACGTCTTCAACAACACCAAAAACGTCTTCAGCAAC
ACCTAACAAGATTTCAGAACAAGCTACAACAGCAAAATCGACCACGACGT
CCACAACAACAACCCATACACCGCCCCAAACGTCTTCGAATCCACCCACA
ACGTTTACAACAACTACCACTCAAACGACTTCGACAAGCTCGCAAATTAC
AACAACTGTTCCCGATACTACGAAAGCAATACCAACTGCAGAAGCAACAA
CAAAAGCGAAAACTATCCAACAGCAAACGACAACATCTCGGACAACAATC
CCACAGTCAACAACAGCATCTTCGACAACCATCAAACAACCAAAGACAAC
ATCTCTGACAACGACATCCTCGCCGACATCGTCACCAACAACGACATCAT
CACCGACAACGACATCGTTACCGACANTACGTCATCACCGACAACGAAAT
CATTACCGACAACGACATCACCACCGACAACGACATCATCACCGACAACG
ACATCATCACCGACAACGACATCATCACCAACAACGACATCATCACCGAC
AACGACATCATCACCGACATCGACATCATCACCGACAACGACATCATCAC
CGACAACGACATCAACGTCAAAACCTTCGACAACCCAACATCCTTCGACA
ATACCTCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGTCAAT
CTATTCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGGTGGGT
TTAACTTTTTGGGTACACGTTTTCTTTTATAAGAGCAAACTATATAAGAA
CATAAGGCTTCGATGGCCAAAATCTTAAAAACCTGTTAAGAACATTTGAA
GGCTTCGCGGACTCTAAAACACCCGATTTCTTAAAAACTGGACAAAAATA
CTCAAAAATTGGCACAAATAAAAGAACATTTTAATTTTGGGTGGGGGGGG
GTCAATGTAAAGTGATTCTGGGGTGATTTTCCCAAAAACCCAAAAAAGGT
TTTGGCACTTTTTGGCACTTTTTCAGGAAAATTTCATAAAATGGTATTGG
GTGAGGGTGAGTGAACCCTCCCCTATCAATTAAGCACAAGAGTACTAGGT
TTCTGAGGTTACTCTTAGGTGTCAAATAAACGGGGGAGTTCGAATAAATG
GGGGGGGGGGGTGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG
GGGGTTGGAAAAAAATCGAAAAATTAACAAGCGAGGGGGCCCGTTTATTT
GGCACCTAAGAGTAAAGCCTTTAAACCTTAGAGTAGTTTCTCCTCAAATT
ATTCTCGCAACTTTGCTTGTTTTAAGTTCTTTAAAATAATGATCCTTTGA
GGACATAGATTTTCTCTTTCGTGATACACACGCTTTTTTAAGAATAGTGT
ACTTTGGATGAGGATCAAATTATATTATTAAGAAATTGCCAAAATTGAGG
GTGAAATATTCTTCACGTATTCTTACTTTTTTAGACTTGACTTTTATACA
AATATGAGAAATGATCAATTTGAGACTTTTTTTGAGTACACATTAAAATC
ATATTTCTGCCTCGAACTTTCAATTTAAGTCTAACAAAAGAAGCTAACGA
AATACAAAATTGACACGGATATGTGAAGCAAGATTGGTCAGAAAGAAGAA
AAGAAAAACATTTCTTGCTTATATCAGCATAATATAACAATAGCAAGACA
CTGTCCTGATATGAAATATGTGTCTGATATGAAACGGAAATAATTATGTA
AAAAAAACCTTTATTAAAGTTATGTGTTTTAACTCGATGTGCTCATTTAT
TCTTCTAGGGTATTGTGTCAGGTTAATATCAAAGGATCCTGTTTGTTACC
AAGCGAAGGATGACAAACCTGGTGGATTTGAAGTACCATACAGTGGAGAG
ATCGTTATGGTGATCCTCAAACATTTTTCTGGATCCATTTCATGTTACCC
TGGTACAAATTATTTCATTACTTAGGGACCACCAAAGACTAGGTTGCTCA
TTTCCTACTGCCTCGTTTGCTATGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGGTAATAGCTCCTG
AAATAATAGAGCTTTTGTCATGAAATTTTCTGTAAATTCCTAACTTTTAT
TTAGCTTCAAAATAAATAAAAAATTGACACCTAAAAATTTTCACACCTTG
AACATGATGACATTTCTGATAGTAAGGTGTCACAAAAATTGACACTTTTC
CAATACAAATTTATTTTCTATGTCAAATTCATCGTTCAAACCGTAATTTA
TTAAATATTTAGGATAAAATAAGCATTTTAAACCTTTGTTAGAATACAAA
AGCTATTTTTGTGAACAAAGGAAATTTTCGGATTTTGCTCACTTTGGGCA
TGATGAGTGACGCCATCAAAAAAATGTTTGTCAAAAGTTACCTTATGTGA
CAAGAATCTTGTGTGTCAAATTTCATCCAAAACGACCCACTAGATCAAAA
GTTAAGGGGTGGTACAGGAAAAGTTTTTTAGTTTTGAACCACCCCTAAAA
GCCTAGTATGAATAGGGTTAAAGTAAAATTATTTCTCTCATTTAAAAATC
ACATAAATAAGGTTGTCCGTAGGAGTAAAAAAAACAGCAAAAAATGGAGT
TTTTCGACCACTATTTATCTTCAATTTCTAAAAATTCTTTGAGTTATTTT
TCCCAAAGCTTAAAGTACTCTGAATTATCTTTTAAACGTCATATGATTTG
CTAGATTTGGAGGATTAATCGGAAAATAAAAAGCAAAACAAACACTGGGC
GAAATAAGAGATTTCCAATCCTGGAAATATCTTGAAAATATGATATTTCC
ATTCACTTTTGTAAATATGGAAATATGACTTTTCTATATTTCCAAAGTTG
GAAATATTTTGAAAATATGATATTTCAATGAATTTCAGAATTGGGAACAT
CATGAAATATGATATTTCCACAGCTTTCCAAGATATTTCCAGGATTGGAA
ATCTCTTATTTCAACCAGTGAAAGATTAGTACACATTTGAGGCGAATGAA
CTATGAATCTAAATTTAAATGAAATAGTTTTAACGGCCATCAAATNGGTA
CTATGGTTGCAAGCTGACGAGGGGTGCCGCCCATCTTTCGACCCTCGGAC
CCTTACCGAGAGGAGAAAACAAAGGAAAGTTTTGTGAATTTTACGACCCT
TACCGGGACAAATTTGACGAATTTTGACCAAATTTCGATCTTTCAGGGGG
TAAAAAGTTGAAATTCTCCTATTTCTCCTACCCTTAGTGGGACTGAAATT
TGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGGAAATCCAAAAAA
GGTACCCTTAAGGGCGGCACATACCGTACCCTCCATTTGTCTAAGTTGTC
TAAGTAGCCCGCCCCCGCGGGCGAGAAAAAAAATTAGCGAAAACCTTTTT
CTATAAATCTGAAAAATTCTGATTCGCGAAACAGAAGAATTATATCAAAT
TAATATTAAATACTTAATGGGGATGGATATCAAATATTAAGATCAGATTT
AAGGTAAATTTGTCCTTTTTAGGCCAATATTTGTTTAAAATTCTATTTTT
CGAAATCTAAAAATCCCGACAGTTTATGCTCGTGAGAGTAAATGTCTTCA
ATTTAGCAAGTTTTTCGAACGACATAAAATATATACGCCTAAACTAATAT
AGTTGACTCTATCTAATTCGATCTTCATGGGGCCAAAAACTTTCCTTCGA
ATTAGAGAAAAATTCAAATTACAGAGAGTAAATTTAACCACTTTCCACCT
GAGGGAACCAATATTTTAGTTCAAATTACAGAAAGATTGCAACCTTTTTC
TACCATTTCTAGGTTATAAAAGTTATTGGTTTTGCAAGAAACTTGGTACG
GGAGCACACATGAGCCTTTTGCTAACTAATAAAGCAGATCAGAAACTCGA
TTTCGACTCCGTGTTTATTCGTAAGTTTTAGCAAATTATTTTCTTACTGA
TTATAATCCCTGGGTCATTAGATTAAATTCGTCTATACTTCGCAGGCAGT
AATATAGGCGCTTTAAAATAATATGAGAGTTTGTGTTGAACTACAATCAT
GGTCGAAACAATTTCAGAATTTAGTGTTTTTCAGAATTTAAAGTTCGGGC
GACAATTGTTGTTTTAGCACTTCCACTTTCTTTCATCGAATATTCCGATT
TTGGAGGGGTTCGGTGGCTTCTAGGCTATATATTCCAAGCCTTATTGGAG
CTAATTTGAGCTTTTAAATCCTGAGATCCTAAGGTCTTAAGTCTTAAAAC
TTAGAGTTAAAACTCTACTTTCCAACTGTAGTTTAACCCGCTTAAAAATC
TTTTGTGGTGTTATTTGAAATTTCGCCGGGAAATCTCCTTTGTCTCAAAT
GTTTTGTCCATGATTGTATGGTTTTTAGTTTTCGCAGCATACCCTACTTA
GGCCCGTCTAAGGCAGAACAAAGGGAGGATGGTGGGTTGGGAAAATCTTC
AAATTTTAATAAATTGTGGGTCCTAATTGTTCCTCTAAATACCTCCAAAA
TAAGGTAATTATAGACTAAAACTTGGCTATTTAGCGCAAAAGAAGACAGC
TGAAAATATTTTCAAACATTAATTGCCGGGGGTCCTAATCATAGATTTAT
AAAGCCCCGAAGGGCTAGATGTCGTGCTTTCGCTTAAAAGTGTGCCAAGG
TTAAGTAGAAAATCCTACCTAGGTCACGTGACATTACAATAGACTTTCAG
CGCTTGACCAATAAGAAGCTTCGCGGGTTTTCGAAAGCAATAGCAGCAAT
CTTTTTTGAGATTTACTTTTTTCTTCAAAGTAGTATAAAATTGTCTCTGT
AATTCGAAAAAAATCCCTGGTCCCTTGAAGATCGAATTAGAGAGAGAAAG
TCAACTCTAGTTGTTTTTTTCTTAATGATTTTGTAAAAGCTCGTTACAGT
TGAAGCACTATTTCAAACACTTGCAAACTTGATATTTTAGGCGATATAAA
TCCAGAAATATTTGCATTCAAAAACGAATTGGGTTATGAAGTCACAGAAG
GTGATGAATTACGAATCTGGTTTTATGAAGATCGAGAAAATCATTTGGAA
GATGATAACAGTGGAGAGCATTGTGTNAGATCATCTAAAATTAACAATTT
TCTTTTGAAATTTTAGGAGCTTTCCTCCTGATATTTTGAGGGAGACATTT
CAGATCTTCGCAATTTTGGAGCCTGTAATAGAGACTGATTTGCTTTTTTA
TAGATTTTGCACCCCCTTTGTGAGGCTTGTGAGGGTTTTGATGAATTCTC
CCGTGCAAAATGATTTCATAGTTATCACACATTATTGTTTTCAGTTTTTA
GATGACATAACTATCAAGAAAGAAAGAAACAACAATCTTTCATTTTTGTA
CAACTCTAAGTTCATGTCTTTAGATAATGATCAGCTACTGAATAGCTTTT
ATCAAAATGAAATACAGTAAACTCTCTCTAATTCGAACCTCTATTATTCA
AATCTTTCTATAATTCGAACTAAAATTTTAGTCTCAACTTCAAAGTAGTA
TAAAATGGTCTCTGTAATTCGAAGAAAATCCCTGGTCCCTTGAAGATCGA
ATTAGAGAGAGAAAGTCAACTCTAGTTGTTTTTTTCTTAATGATTTTGTA
AAAGCTCGTTACAGTTGAAGCACTATTTCAAACACTTGCAAACTTGATAT
TTTAGGCGATATAAATCCAGAAATATTTGCATTCAAAAACGAATTGGGTT
ATGAAGTCACAGAAGGTGATGAATTACGAATCTGGTTTTATGAAGATCGA
GAAAATCATTTGGAAGATGATAACAGTGGAGAGCATTGTGTTTATGTTCA
TGTCGTATATAAACGTGATACGATGACGGGTACAAGTGTGCTTACAAATG
TGGTTACAAATTTGGTTACATAAATGAAATGGTTTTTAACGAGGGATAAA
TTACTTGAAAAAAGGTGTACGATACTTTTTGACTTTTCGAATTTTCATTT
GACTTTTTGACTTTTTTTTGACTTTTTGTCCAAAAACGCCAACCGACAAT
AAATTTTGCTCCACCCATCCTCCCATTCAAGAACACTTTTAGATATTTTC
TAGACTTTTTTTTTACTTTTATTTGACTTTTTGACTTTTTTCTAAGAATT
TTTCACTTTTTCTTTGACTTTTTGAGTTTTTCTTTGACTTTTTGTAGAGG
TGTACGATAGTTTTTGAGTGGTTTACCCGTCGGTTTTTAGTTATAATTAA
AGTTCAGGTACCACGACATCAACAAGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053953TCONS_00053953Clytia hemisphaericatranscript
TCONS_00053952TCONS_00053952Clytia hemisphaericatranscript
TCONS_00053951TCONS_00053951Clytia hemisphaericatranscript
TCONS_00053950TCONS_00053950Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053952-proteinTCONS_00053952-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:118155..126033 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0	0.12	0.12	0	0	1.15	1.04	3.6	3.06	2.82	3.45	0.2	0.11	0	0.11	0.1	0	0	0.11	0	0	0	0	0.11	0.05	0.14	0.23	0.06	0.06