|
|
Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_242:81574..88071+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034177 ID=XLOC_034177|Name=XLOC_034177|organism=Clytia hemisphaerica|type=gene|length=6498bp|location=Sequence derived from alignment at scaffold_242:81574..88071+ (Clytia hemisphaerica)
gaaaatttgaacataCGGGGGAGTATCATCAAGCCCCGTTTAGTTCATAA
GGGTAGCATATGGTTTTTCTCTATTCTTCTATTATTCTTTTGGTAGACGA
GGACAAAAGAAGTTATTTTTATCACGACGACTGTTTGAAGGTAGAGCGAA
ATTATGAATCATATTTAGagataaagaaatattataattttcCTTATGAA
ATTTCTAGGGGTAGAATATAATATTGTATGTTTAGAAAATAGTTCAGCTT
TTTGATGTACTTATTTCTGTAGGGAGAacgaaattgaatatttttgatcG
AGAGGGCGAACACAGTAACGTTCAAAACGAATATGGAAAGTGAATTATTT
TGTAACTTTTGCGAAGAGTTGTTTTGCAAGCCACTCAATTTACCATGTGG
TCACAATATATGCCAAGCTTGTGCTTACAAATGCGTCAACGAAACAAAAC
AGCAACCGACCCAGGCCCTGAACGAAATATCTGCCAAATCAATGTCTTTA
CCAAATCGACGTCGAAAGATCAGCGAGAATACAAATTTATGTCCGGGTAA
TTTGGCTAACGATCGGACAGATTGCTCTTCCGATGATAGTGGATATTTAA
GTATGCATGAAATTCACGCTTGCTTACATCAGCAATTTCATGGTCCCATG
GTCTCGATTAAATGCCCATCATGTGCTGTGAGTTTTGTTTTGGATGATCG
AGGAATTGATTGTCTACCTCTAAACATAATACTCGAATCACTTGTTGAAT
TATATAAGTGTAAGAATTCAGAGATTGATTGTCAGCTATGTGAAGCTGTA
CCTCCGAATAAAGCTACCTCGATGTGTGAACAATGTCGAGTCTCATATTG
TGAAGGTTGTCTGAAAATCTATCACCCTAAACGTGGACCACTGGCATCAC
ATACTCTCTCCGCACCATCGAACAATCAATGTGTTTTGAAACACCGTGGT
GGAGTTTTGAAATGTTCAGAACACGCGGAGGAGAACATTAGCATGTATTG
TGTTCTGTGTAAAATGCCGGTCTGTTATTTATGTTTTGAAGAAGGAAGAC
ATTGTGGTCATGAAGCAAGAGCCCTGGGTACCATGTATAAAGAACAAAAG
GTTAGCATTTCAAATGCTCGTGACATATTCTTTTATAGCCGAAAATGTCG
GTTCGTGACATTGCTTTCGTCCCTTAATTTTGGGACGAGTTTTTCCCGTG
CTTTCTTGTGTAAAAAAGATTGCGTTTTATTTcttgaaaagagaaaattt
tatcaTCTCGGGAGGCCTAACCCAATAGTTTCTGTGAAAGTATTGTGATA
TTTGAAATTCTAACTTTTGTTACATTTAGGTGGAAATGACGAGTCGTGGT
GATCGTTTGAAAGataagaagaaaaatttaaatgattTCATTCAAACGCT
TGATGTGCATGTCAGTAAAGTTCAAGTAAGTTTCTTCTCAATCTCATACC
CAGAGCTACTTGCATCCCCTTTTTTTATATTACTGATGGACGAGATACAA
TCAAGAGTCTTTCTACTATTGAATATCTTAGAATAGAAGCTTTAGTAGTT
AGTATCATTTCCCCGGTCCTCTGAAAATATTAGGGTTTCAACTGTAGAct
gtttctctttttctttcacGCACAATGGAACTTCGTTTGACCGACTCTAC
TTTGGCGTGATAATTTTCTGGCTGTGAAAAATTTCCTGTATACTTAGAAT
TCATTAACAATTAACATTGTGAATCGAAACTAATTTTGCCTTTCTTGAAA
GCAATATGAAAACTCTCTTTTAACTCCTAGGAAAATGGAGTTGATTTCGA
ATCACGTGTGGTGGCTCAAATTGACGAACTGATTGGTGCATTGgaagaaa
agaaaacacaacTTATAGCTTCCATCGGAGGTCGGGTAGCTGGGAAACTC
GACATTTTAAACAAACAACGTGAAGAATGTTNTCCATCGGAGGTCGGGTA
GCTGGGAAACTCGACATCTTAAACAAGCAACGTGAAGAATGCTCAAGTAA
TCATCGTATGATGACTGGTCTTCTAGCCTACGTTGATGAAGTAACGAAAG
AGGAAGACCCAGCTGTCTTCTTATTGATCTCAAGCGCTCTTTCGTCAAGG
TTAGTTAAGTTATTGCATTTTTCAACTCAATAAACTTCAACCGTAGTCAC
GTGGACAGGCACGTGCCCTTTGATTTCTTAATTACCAccctaaacttttt
ttttgttttgacacctttttcttctttcttgtatTCATATGGGCAAAAAA
AAGCTGGTAAACATAAAAGCGCCCgggcggcaattggcggctacggtcga
aaaaatGTATTCTTTTCTTGGCTTTAAGATAAATCTGAGATAGTCCTCTG
CTCGGGTGAAAAACTCTAGTACATCTCAACCcgcatatttttttgttttg
acatttAATTCTGAtcaatttgattttcagacttctcCACACTCTTGATA
CCTGGATCGGTCGACATGGTCTTCTACCGGAGGAGAATTCCGAAATGGAA
CTTGGTTTAGAGACAAGTGATGTATTAACTGCACTCAATCGTTGTGATTT
TGTTAAAGTTGTCACACCGATTCGCATTGATAGTAAgtttattttaacat
ttcaaAAAGGGGCACATGATTATGAGTTTTGTTCTTTGAATGAAGCATGC
GAGTATTTTAAATCAGCGTCAAAATATTATAATGTGATGATTCCTAACTG
GGTTAAATTGACAGGTCATCATCTCAGTTGAGTCTATAATAGAAAAGAAT
ACACCGCATGAACACACACACATTTTCTGTTAAATCCTAAAAATTACCAT
GGCATTTGTCATGAATTCCGGCAATAGATGCAGTTTTTTACGTCACTCGA
AAAGTTCACTGTGAATTCTTTGTGTTTCAGAACCAACGACTCCAATAATC
GACGATACAAAATGTGAAGTGATTAACAACACGTTGACTCTTGAATGGTC
AATGAATTCTTCCACTCAAATCGATGAATTTGTCATTGAAGTGGATGATG
GCCTAAATGGTGATTTCCAAGAAGTCCATCGAACGCCTGATCCTTATTGT
ACACTAGGCGGGCTACAATTCAACTCGACGTATCGGTCACGCGTGCGCGC
GGTCAATAGTGCGGGAGAAAGTACTCCGAGTGATGTCATTTGTATGAGTA
CTCCTGAAAGTAAGTTTGAAACATTACATTGTACCCACTGCTTGTGCCTA
TCGTTTAACCCAGTGGACCTTCGATTTAGGCAATTAATTtccacgcattc
acgcattcacgaaAACCACTTGGGCCCCCTTAAAGATATCTATTAGAGAC
ATCTAAGAATAGAAGatctaaaatcttaaaaaatgttTCGATATAGGGTG
ATATCTATGCAAAGTTGTGCTCATAATTCGAACGATTCGGCCCTTATCAA
CTACTTTAACCTATGATTCCCTCCTGATAATAAACATTGAAAGTTAAGGA
GATCCGTAAAATAAGTATCTTTTACTTGACCAAAGTAATATTGATTGAAT
CATAATATTCTTTTAATACTCCTTACAGTACTTTATTATATTGTTTTAAA
CTTCGAAATGGGACGACGCTTTCTAGTTTCTGCAATTCATTGATTCAATA
TTGTTTTAACTATCGAATCCATTCTTTACGTCTACGTACTTTCTACTTCT
CAGTTGCTGTATTCAGTTTGGATTCGACTACCTCACACGCCGACATCAAT
CTCAGCAATAACAATCGTACGATGAATACTGGCAGTTTTGAGAATCGTGT
TGCCATAGCTGATGTTGGATTCAGTCGAGGTCAACATTATTGGGAAGTGA
CCATTGATCGTTATGAAGGTAAATCaattatacacccctgtctcacagcc
ccggtagaactttttccctcagtggggatgaaaatttctatcaaaatgtc
aatgggaatagaaaatctattgtttccagctcgaaaattcaagtggggat
ggttttggagtggaattttttacattcagttttcaatggggataaaatca
tagagtaATTTCACAGTGGGGTTGAATGTAGGATATTATTTCCACAGGGG
GCGATTTTTTAGCccatttttccaccggggtggggggtccaccgggtctg
tgacacaggggtgtaattatgAAGAAATGAATTTTCACTGTTGAACAGTA
CGTAACTAGGATCCTCTTTTGTGCTTCAAAATAGAAGGCTCCTTTAAACT
CTTGACAATATCAAACCGTTTATAGACAGCTTTTCAACAAATACTCACAA
GTCACTTAAAGTGATTTATGAAATGCCATTCTACCATACCACTCTGCGCA
TCAAAAGTGACCATTGTGATCATTAATCGTTATGAAGGTAAAGGAATTAC
AaagaaaggaattttctttgtcttttcgaGACTTTGTTGAACAATATCAT
ATTTCATTCTTCAAAATAGAAGGCTCCTTTGAACTCTTGGCAACGTCAAG
CAGTTTAGACACGTTTTCAGCAAATACTACTCACAGGGGTAATTATAGTG
ATTTATGCAATGCAATTCGACCATACTACTCTACGCACTAAAATCACTAA
AAGCTTCTCTTGGTATTTTCCATCCAAGAAAGGTGTAATTATTTGTAAAG
TATATCTTAAATATCGAACACGATAACTGTTAACACATCTTCTTATTTAG
GTAACCCCGATCCAGCAATTGGGATAGCACAACTAGATTGTTCAAAAGAT
GTGATTCTGGGCCGTGATTCGAAAGCATGGTCGGTTTATGTTGACAGTAC
AAGAAGTTGGTTCCAACATAATAACGCTCATTTGTATCGATCAGAAGGAG
GTTGTTAGCTATTGGTTATTTGTTCAATTATAGTGACACTCCTCATCTGT
AGCCAAACTATCATTATTTTGCAATCGAGTCTGAGCTTTTGACGCTAAGT
AAAGTGGATTTCCTTGCCATGGAGATATCCCTGTCTCATTGATCCAGTAG
TAGCTAAATACCAACTTTATCAGTGGAGATATCAGTAACTTCAATTGAAA
ACCACTCCTGTATCTTGTAGAAGAGCCCATGTTCGGCGCTTTTGAAGTCA
AGTTGACTCCCCTTATGGGTCATTTTCATTGTGACGCTAATGATAACTTT
TTCTATCGTTCAGGTATTGAAGTTGGCTCAACTATTGGTTTATACCTTGA
TCTGGATCAATGTCTGCTTTCATTTTATTGTAATGATGAAAAGCATGGTC
CAATTGAATTCCCTAGCCTGGAAGATGTTGATGTTGTATATCCAGCATTC
AGTCTAAATCGTAACGTTACCATGACATTATATTCTGGAATCAAACCTCC
GGCAGAAGTATGAAGAAGCAAGGCATTAAAATGGAGAAACAACTCGAAAC
TGTTTTCATTTTCTGAGATCTGAGATTATGCGAACAAGGATCGAACATTC
CTGGTcacaaaataaatactttttcatAAGGGAAAGTAAAAGATCTTACT
GAGAACCTAACTGATATTCTGATGGTGCAtcggcggccgcccacgctaaa
agctctaaaggagcggacgaccatcagagcaaagcgtgtcgtagcatcTT
CACACCTGGTACCAGATAAGCCAAAGAGTTAAGTATCATCAGGAAGTCAA
GAGGAAATTGGTTGAACTTCCACAAGAAATTTTTATCTATGCTACCGTTT
AACGTTAGACAAAATTGTTGCTTATCCTAGGGAAATGATTTCAGTTCCAT
ACAACAATCGCGAAGTTGTTGAAACCAAATTATTATTCATAGTCTAAGAC
GGTCTAAGACttgcaaatattttttatttagattCTACCTAAAAGTAATT
TAAGAATTATATCTTTAGTGGAATTCTTTACTCGACCTCTTATTACTAAG
AAGATTATGCTCGCTAGTAAATAACAATGAAATGGCTGTAATTTAAAACA
TTTACAGTCTTCGAGGGTATTGTATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTATTG
TAATGATGAAAAGCATGGTCCAATTGAATTCCCTAGCCTGGAAGATGTTG
ATGTTGTATATCCAGCATTCAGTCTAAATCGTAACGTTACCATGACATTA
TATTCTGGAATCAAACCTCCGGTAGAATATATGAAGGTATGAAGAAGCGA
GGCATATTAAAATGGAGAAACAACTCGAAACTGTCTTCATTTTCTGAGAT
CCGAGATTATGCGAACAAGGATCAAACATTCCTGGTcacaaaataaatac
tttttcatAAGGGAAAGTAAGAGATCTTACTGAGAACCTAACTGATATTC
TGATGGCgcattggcggccgcccacgctaaagctctaaaggagtggACGA
CCAATATACTCGTTGAGATACGCCCGAActtcagagcaaagcgtgtcgta
gcatcttcacatctggtaccagataagcCAAAGAGTTAAATATCATCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:81574..88071 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| TRIM9 | PREDICTED: E3 ubiquitin-protein ligase TRIM9 isoform X2 | Homo Sapiens |
| TRIM67 | tripartite motif-containing protein 67 isoform 2 | Homo Sapiens |
|
