XLOC_034653 (gene) - C. hemisphaerica

Overview
NameXLOC_034653
Unique NameXLOC_034653
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_248:204643..211987+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034653 ID=XLOC_034653|Name=XLOC_034653|organism=Clytia hemisphaerica|type=gene|length=7345bp|location=Sequence derived from alignment at scaffold_248:204643..211987+ (Clytia hemisphaerica)
tcttcATTGAATTTTTTAGCAATAAAATTAGAATGTAAATAAAATGACAG GGAGTACAATAAACAAAAGATTGAACCCCAAAATGGAATCAATTCAGCCG GTGACTCATTGTCCAAAGGTATTTTTCGTTTTATCTTCTCTATTGCTGCA ATTGAATATCTATACTTCtagtatatatattttttcaaactaACTAAGAT AATCTAAATATTCATTAACCAACAGATGcgtttttcttacttttctaTGA TTTAATGTAGTGAACTGGTTTTTACCtacaaaaacatattttttggaTAT AAATGATTGAAAGGGTAGGAAGGAATCATAGAAAGGAACCCTACTTTAGA ATTTATCAATACAAAAGCTTGTCCGTATCAAGTTAAGCTTGTAGGAAATG AAGAACTTTGACCAAATTACAGATCACTTCTTCACTATAACTATAAACTT TCTTTTTGCACAAAGcttgatttgaaaacaaaagctttagaagaTCAGAA TATGAAAAAACGTGGAAGAAAGAGGAAGCGCATCACCTGCAGTAGCTCAA GGCGAGCAAAGAAGTCAAAGATCGAACCTCTCATAATTACCACTGAAAGT AAGTTAAAAGTAACCAAATCTTGAGAACGGTGTTTTTAAAGATCACAaga ttatttcatttttaagattttaaatgcCAGTATATATTTTACTGAAGTGA ATTCTCCTCTATCTCAAACTTGTTCCGCTCAATGAAATGGGGACATATTC TTTAATATTCTTTTGTATGcaactttttcattttcccttCTAGAATGCTG TTTCTGTTTGATGGGACCTGACAAAGAAAAAGGAACTTTTTTTCAAGATC AAAATTCTAATATTGCTGCACATCAATTTTGCTTGGTATGTTGTATTTCA TGATTTTCCAAattaatcgtcagccgtgcaaaattactcgaatctgattg gtttagaggagtgtgattaatcgttaattgcactattaccacttttttca ctcttcggcgggggacacttttgtccccttattcttttctctcccaagtc ctgtgtcagagacttttttttactatataataaaaaacaaagacattttt tttcttcaatataaaaaagaacaaagaaattttacgttacaattcGCTTT GTGTACATAAGTttcgaatgtcaaaaattttccctttttctaaaaaaact atgatttactaatgattatttactgacgattacctcggaatggtatgttt tgtcgtgcaattaacgattaatcactcgtaacaaaagagaaaataccgta atttgatCAAATTGTTCATACCCTTTTTCTCAGAGTGATTCAAATCTTAT TTGGATGTACTGAAGCTTTATCCTAGCTATaagatttaaagattttgttt ttttgtttactaGCTTTTTTCGGCTGGTCTTCCACAAGCCGGAGAGGACA ATGAGGGATTTGAAGGTTTCCTTGTTGCTGACATCCTCAAAGAAGTACAG AGAGTTTCGAAACTAGTAAGAAATCTTTGTTGCTATTCTAATGCTTTGTT GTTTTAAAAAGCTTTGAAGGTGTTAACCAGAAAAATAGGACTTAAACTTT CAACAAAAAGTATATTCATAAAGTAATTTTTAATCTGAATCCTtctatta aacattaaaaaaattttgctgttcAGGACTATTGAGCTGTGATACTTGTG GAACGTACCTTCTTATAAACCTGTATACGTTATATCAGATTGTATCCTAA TCTCATTCTATTCTTTCTTtgtgaattttcagatttgtAAATTTTGTGGA CGGAATGGAGCCAACCTTGGTTGTTGTGTTCAACATTGCCGATCAATTTA TCATTTTAATTGTGGATATAAGGAAGGATTACAGTTCCAATTTTGTGGAT CTTTTGAGTAAGCTTTTCAAGTCATATTGGCATCGAAGtgtaaatttttc aatcttcttAGTTTCTTTACCATAATCGAGAAGAAAAGTACTCTCTATTT GATAAGAAATTTCAACTGCAAACTTGGTTTGAAACCTTATTCATACATGA AGAAGCAATACAGATTATTGAAGACTGAAATCCCCTTAAAGACATGGaca caaaaatcttcaaaagattttgaagaGTAATTTTATGGATATTGGATGTA TTTCTTTTGGCATAAAAGCATGGAAGAAGAAGTGATTCTGAAATTCTGAA TAAGCTTaagtttttcttccttttttactTCATAGCAACATGTTTTAGAA AGTTTCTCACAATACTTTATCTCCTTTTAGCACATATTGTCATGTTCACC GATCACATCAAGATTTATCGCTAGTGAGAACCAAGCCAAAACACCAATTT TGTCCAATTTGTTTAGAGAATTTTTCCTCTGTACCACTAGTATCCAGTGA AACAGTATTGAAAACACCTTGCTGTAATAATGTCTTTGTCCACAAAGAAT GTGTGCAGGTGAGAAAAAGAAATCTCTGAAGAAATATCTTGAAGAAATCT TCTTGGATTGCATTGACCTTTAGTTACTAGATTTTATTCCAACattaaac aaaacaattatGCTGATAAACCTTTAGTTAGAATTCCTATTTTGAAGATC ATTGTCGTAAATGCCTTTATTTTGCAGTATCCCTTTTTGACTTGAAtgat ttgactttttaaagtctGTCTTAAAAGCCAATCTGGAACTATTCTTCTAA AACTCCCTTATAGCCAGAAGTACGAGTTCTTATAATCCCCCAATGTCAAA ATCATAAGATAGACACTGGAATATTCGAAAGTGTTCCTTTATAGTTTGAC TTCCGCAAAAGTAATGAGATTTTCCTTATAAGTGTATTAgatcttttttt ctgaaactCTAACTCTAACCTGCTATTTTTATAAACTTATTTAGAGACAA GCCTCAGTGGCAGGTTACTTCTTTCGATGCCCTTGCTGTAATAATAAAGA TGAGTTTGGGGATGAGATGGCAAAATATGGAATCTATATCCCATCAAGGT AGTACTTCattcatttaaaatatttttaacaatgtAATTACTCTCaatga tttttatcaaaactcAGGCTTCATCTAATTTCTATTTTCAAAGGTTGAAC AACTATTCTGTCTTCTTAGAGATGCTGCTTGGGAAGAATCGAATGCTTAC AACGACTTATTACAAGAATACGATAAatgtgatttcaacaattgCTCATG TACCAGAGGACGAAAATATTCCACTCAAGCAGGGTTTGTATTTCATAATG TGTTGCTGCTTCTGTCCTTCCCcattaatttaaaaattttgcttgTAGAT GCTATGTGTAAAAAACCAGTCTAAAAGTCTTAAATTATTAAGATTATCCA TTTTTAAGTTGCCTTTAGACTCTACCTTAAAGATTTCTTAAACCTTCTGT AATTTTAACTCTTTATTTAGAAAGTGGCATTTACTACGCTGTTACCTATG TGGCCAAAGTGCAGTTCATGTTAAATGTCTTGGTCGTTGTTATATACCAG GTATTGGCTACGTATGTGCCACATGTAACAAAGTTGCCAAACTGAACAAA GAAAATATAGAGACTGTCCAACAACAAAGTTATACCGAACGTTTAAAAGA ACATAAAAGAAGGTTGAATCTCCTGAAATCGAGAAACGACCCTGTGTTAT TAGCATCTGAGGTCTTTAGTAAAGAAATTTTGCGTAAAAAATTTAACATT GTGAATGATTGCAAAGTAAGGCTGAGGAGATTGGACATAAATATTAAAAG CAGAAAAATGAAGTTATCCACAGCATTGAAGTTTCTTCAAACACCAAATG AGAACAAGACACATCTGGTGACGACCAAATCTGGTAAGgttgtgaaatat tttaaagCAAAGCACTTTCACTAGACAGACTGGTTGCATAGGTTGCATAT GAATCTCCTACCTAATCATTTTGTGTTTTCAGTGAATTTATGACTATTCT AAACAAACACAAgaggaattttgaaaatttttattgaaagtcTTATTCTT TACTTCCAGTACTTGCTCCAGTAAGAAAATCTCCACGGAAAAGCCCTCTT AAATCCCTCATTCAAGTTCAGCCCAAAAAACTTGGCGTCAACACAAATTA CATGTTTCGTGATCGAGGCTCAAGAGGAGAGAACATGTGGCTTGAATCCC AATCTGACTTGAGCGAGATCAACTCGACaactttaaaaacaaacaatgaa aatagaaCTCATAAAGTAATATCAAACGAAGATGATGATTGTCACAGCGT CATTGATCCAAATAACAATCAATTTGTGaacaaaaatcttgaaaaagagG AATTGGATAACGAGTCACCCAAAGGCAGTACAGCTGATACCCAAGACAGG GAGAATATTGTGGAATCTTTGAAACAAACCGGTATGAATACCAAAAGAAA GCCAGCCAAACTAGTTAGTAAAGTAGTTAGTGCCTTCATGCAAGTTTTTC CTTcaattcaataattttttttactaaactcacttgaaatttttatttcg agCCATTAGTGCAGTATGGAAATGAAGTTAATGCATGGTCGTCCATATTC TTTTTAGTGTAAAGTTTTCTTTAAATTCTCATACTTTTAGAGTTGTCAAG AAAGATTGATGTCGGCGATTGGAGAGCTGTAGTATCTCACTTACAGGAAA GGAGAAATGGCAATTGTGGGACAGATTGCAACGAGCTTCAAGTAGAACAA TCCAAACTTGTTTTTCCAGAAGTTGAAGAAATTACGTCTAATATCAAACT TGCTGAACGATTGAAATCTGTAGCCGTTAAACACCAAGAAACAGCGAATT ATTTTCGCCCAAGAGAAAGCAAAGTAGAATCTGACGTCTCCACAAttact ggaaaatttgactCTCAGATGATGAGAACGTTAAAAAGTAAAGATGCCAT CGTATCTGATGAAAAAGTCAATGAAtcatttcaagaaaaaattaaattga taCCACCTATTTCAAAAATAGCACCAACAAGCACAAAAGATGCCAAACaa cccaaaaaatcaaaaacgtcTATTGCTGAAGAATCAAAGCATGTTTTAAA GTCCATTAAATCAGAAATATTATCTCCCAGAAATAGGGAAAACCAAAATA TAGAAACAAGACCTTCTTCCACTCTCTCAAAAAACACCAACACTACAATA AAATCGATCCAACAGCAATATTTGTCACCCAGGGCTATCCCAACTATCCA TACCACTATCAGATCTGGTGCTGTTCCAACAATGAGATTGAAACCGCAAT CACCTTTCAAAGTGGTCTGGTCACCAAATATGAAGGTTTCATTGGATGAT TTCTTAAACTCGCCCCAGACTCCTGGTCGATGTTTCTTAGGCTTTGACAT GGATTTAAAGCCAATATACTGTGATAAATGTAATTTTTGTGTTACACCTA AAACGTCAACTAAGCAGGCTAAGCTGACATCAACCAAATCAATATCTACG CTCTCAGAATTATCCGAATCGAAGCTGGTTGCTGATAGTAAAACTAAAAC TTCAATTACCCAAAATGTTCCCTACGCCTCAGTAACCAAGAATGCATTTA CACCAAGGGTAACCCGAGCTAGTAGTATCAGGTCGAAACAAATCATGACA GAGTCACCTTTGACTCCGGATTGCTGTTTCTTGGGTTTTGATAGTGAGTT AAAACCTGTGTTTTGTAAAGAATGCAAGATAGCATCTCCGTCTGCTCGGA CCACCGGACCATGCTCAAAACAACGGAACTTTCTGACACCTATGAAAACT GATTTTGCAGATTCCAAATTTGGTGGCTTCATCAATAAAGAAAACCTGAT GACATCTAGAAAAcaactttacagaccagatgaAAGGAAGTACATTCCAG TCCCTTGTTTAGATATCAAACAGCTTATCGGTAAGAACCCAGATGATGAG AAATACACTAAGATATGGACACCCTATCAAGATTGCTCGCAATTATTTAG ACCATATTCTTACAGGGATGCGAAGGTTGGATGTGGATCAGATACTCGAT CCAATGACATTGCGATGGCATTATTGGAGGAGGCTTTCGAGAACGATGAC GAATTGGTTATTGCCGTTGAATCAGGTTGATTTGATGTGGTTTCAAACAA TTTCATTGAAGGAAGATCTGGAGGTATTGCTTCAACCGTCGGTGCAAATG ATCTTGTCCATGGATTGAAATTTATGGAATCCATTGAATCTTCATCTGTA TTCATCGTTGAATGGACTTGATATATTGTCGGATAGTTTCAATAGGGTTG AATATTTATATGAAATCAATCCATTGTTTGTTTCTCATGGTTTAGTGTTG TCGACGCAATTGCTTCGGGCTCTATATGAAAACAGTTAATATGCTACCAA TATTTTTCATCGTTCAGTTTGAATGTCTGCTCTAGAAACAACACTTTATA TTAAATGCACCTATTAACCCTCAACGATGCGGTTGGCTTTTAAGAGGACT TGAAAGGTTTTTTCCCGGTGCACCTCATTTTAAGCTGCTTCCATAACAAG GCAAATTTCGGCACAAAGTTTTATTCCGTACGAGAGGCATCTCCCTGAGT TCCTCTGATGGGGTGAGAACTATAAAGCATTCGAATAGCTTTACTAAAAA ATTTCAATACACTTGTTTTTACGATACAGTCATCGAAAAGAATTTCCCAT TATACTTTCGTTACCATTCTCCTCCAAAAGCGTTAAGGGTTGAGAGGTGT ATTAACACATCGGTCAAAAAGAAGTAGAAATACCCTGTCAAGAAAATTTG GTATTTCgatctgtttttattttgttacagCAAAATACTTATAGTGTAAA TAGACTCGTCATGAAAGACATTATGTtgcatatatatatatttttttttt gatacagtTTTTAAAGATGTAAAAAACGACATTTTGGTTTTAGCACGAGT TCTGAAAAGGGTCAAATTCCTAATTCCTAGTCTCCCAGTGGCAGATTGTA TCGTTATCTTGCGCTTTGAATTAtatcttacacgttttttttttattaga acctagtttataagaacatataggctgaaactcgtcgaaaaattaagaac atcttaagaacatgcccagcctcagtttggaaaaaaatgacaagaaacta caattttttcctctttttaagcagttttaaccgaatttaggggtggatct tcaaaagtcgagagtcaaatattgtccaaattttgccaaatttaagtgct ctttattttgtatcatattgtcgatttagagtagtctgaaaaattaagaa cgcatttgagaacattttagctgaaaattgctaaaaaaaataagcacatc caggctcagccaaattttaggtgttctaataaaaaaaaaacgtgt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054994TCONS_00054994Clytia hemisphaericatranscript
TCONS_00054995TCONS_00054995Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054994-proteinTCONS_00054994-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_248supercontigscaffold_248:204643..211987 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.01 2.57 1.84 1.48 8.94 6.92 5.51 6.06 2.88 4.1 3.73 2.03 3 3.44 3.98 4 5.04 4.34 1.51 1.54 3.5 3 5.51 6.24 7.78 8.55 1.86 1.2 4.87 4.83