XLOC_034654 (gene) - C. hemisphaerica

Overview
NameXLOC_034654
Unique NameXLOC_034654
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_248:212430..222150+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034654 ID=XLOC_034654|Name=XLOC_034654|organism=Clytia hemisphaerica|type=gene|length=9721bp|location=Sequence derived from alignment at scaffold_248:212430..222150+ (Clytia hemisphaerica)
CTCGTTGTTGATCCCTGCATTTTCATCCTTTAAACTTGACGCCCGCTGTG TGTCATTCTTCGTGTACGGCAAATTCCTGACCAAAGTTTATTAGGGATGA CTGTCGTGTCGGGTTTCAACTTATGATTAGTTTTTATATTCTTTTGTCAA GCGTAGTATCATATTTTATCATATAGGCATTATATACTCTATATATTTTG TAAGATTGCACAAAAAACGAAGCCTTTCGTACCCAAGTCTGTCATTTTCA CCTTTTCACCTCAACAAAATTGTTTGTCTGAATCACATATGATTAACAGT TTTGAGAAAAGTTTTGAGAAAGGTTTATCAGTTTCTTCAATTTTACATCA CATTTTTTCGTTTCTGCAAAAGTCATCTGAAGCTTGATTTTTGTTTCTCA Tatttaatcttttatttttagcaatcacaaataaaaaataaaatcatcaa GAAACTGAAGCATTTGTTTTGTGAACCAACCCTTAGTATTTGAATTCAAA GAACAAGAAGTTTTGATCCATTGTAATACCTTGTATGATGACGTTTGAAA CGTAACATGGAAACGTAATATcaaaacgtaatatgaaaagGTAATATCCA AGATGCCATTCCGACGGAAAAACAGACCCGCGTATGCAGGCAGAAGAAAA CAAAGAGCCGAACAACTGGTAACAGCTGATTCAGGTATGATTGTTtctaa tttcatttcatttgtatTTCTTATTACATTTTTAGATTGAACTTAATTAC CAACTTTGTACATTGTGGAGtgaagttaggaaaattataatttgatttaa tatgaatttgatattataatagatcttatcggagtttttgacttttctaa aacagcgatgcattgtgggattgtttcgggggtattacattagaattccc tcgaggaattcctaagaaatttctattgtaatacccccgaaacaatccca caatgcatcaaaaactccgataagatctattacaGTATGACTTTCTCTGG CAGTTCTAACCAGCGAATTAAATGCATCTAACCTAGACCTGGTTAGATCT GCTGGAATTTAGTTCATTTAACAGTTATTTCTTGAAAGGACCATCACTaa ggaaattgatttttctatttttttctttcagaatgTTGTTTTTGTCACCA AGGACTGAACGAAGAATGTGGATTGTTTTTCAACGATGTTGAAGCCAAGA TTGCCGCTCACCAGTTCTGCTTGGTAAAAAGGCTTTGAATTTGTTAAACT ACCCTACTTAAACTTATCTCTTCTTTCCTGAGTTAACCTTCCAATGTCTG CTTATatttatgatattcatgacgtaatgtcctctatggaaagaccccgg tttttgccagtagtggcaaattttatacaatttttGTCTAATTTAGATTT GGTtgaaaccggggtatttccgtagaaaacattacgtcatgactATCATG AATCAGGTTTTAAAATTCATTATTAGGTGCAAAACTAGTATTaggtgcaa aatttctttgttagATTTGCAGTATTTTTAGGGtctcatttttcatcaaa gtttataataagaactcaaaaatttcaCAATGTCAATTACAATTCACCAA AATATGTGCTATAGAAtattaaaatccattttccaatTCTTAATATTATT GCTTTCACCACTGTTGTTTCAGGGCCCGCGccacgattttgaaagtgagg gggccaaccaaaatatagtgactaaggaggcgcaaccatggtttgcgccg acgggcgggaaaattttcgattttgacctatcttatttggctaaaacagc ttcctttttgttctgattttctgaaagaaaactgttaagtttgtttgttt aaaacaaaagagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCATTTCA GTTTTTCAGTTCAGGCCTTCCACAACTTGGTGAAGACACAGAAGGTTTTG ATGGCTTTTTGTATAAAGATATCATTAAAGAAGCACAACGGGCTAATAAG ATTGTAAGTCGTGCCCAAACCCTCTTTCTCGTTCGATTTATTGAACAAGT CGAAATTGGGAACCGCGGGAAACCGGACATAGGGAATGAGTTCTGACTAA TGGAATTCTGACTTCACTGATGTTGTAAACagattcattaaaaaaaacag cTTCCATCAAAGTTTGCAACACCTTTATCCCCATGaagttatttttgaaa cttgGCTCAGATTTTCAAATTTAGCAAAGCTTCCAAAGTTTTTTTCTCTT AAATTTACTGTAAATGTCAAATTAACTAAATTTGATGATTTGTAGCTTCT TTGATCTGTTTCAGTTATGTAAATTTTGCCAGCAACCAGGAGCGTCAGTG GGTTGTAGTTTAAAAACTTGCAGAACGTCATATCATTATTTGTGTGGATG GAAGCAAGGATTACAATTTGTTTTCCACGACTGCTTCGAGTAAGTAATGA CCATTGTATAGCTTTTcattaatgggctcttccagaaaaaaattgaatat ggagggtggaggatataacattttttagaaatttatcccccggacattgt gacttttgaccccccggacagcaAGTCTAACCCCCctgacaagcatcagt tgaccccatgGACAATTAACGTTACCCTCTAACaaagcaaaattaccccc aaagaGAGCAAGTTTACTcaccggacactatatcctccacccccatgtac ggacattttctggaagagcctaaTGGTTCGACAGTGTTTATATATACTGT GGCTTCGATTCATATTTATTCGAACAACGAGGCAATATTCGTTGGGTATA TTCTCTTTTTCTCTCACTAAAGTTAAAACATCACTCTTTTGATCgaaagt attcatgatatgcaccattgcaatgtcttctgttccacccaatagctgat tggttgaaagtgacgtattgactgcttttacgtcacttccaaccaatgag ctattgggtggaacagaagacattgcagtggtgcatatcatgtatACATG AGAATTCTATTCATGATAGGCAACACTGTAACGACTTCATAAAGTTACGT AACTTCACTGTTTTTGGGGTGCAGGAGTTATCCATTATCCaacaaacaat ttttaagaTAAGTCTTGGGATCTAATGAACTTTGTAATCCCCATCATTTT TCTCAAGGGCATGTAAtagccatagatttataaagcccgaagggctagat gtcgtgctttagctgaaaagtgtgccgtagtTAAGTAGGAAATTCTACCT AGGTCAcacgcttgaccaatcagaagcttcgcaatattttttgcgatatt tactttgtttgcttagaaaagcttaaagcacaacatctagccctttgggc tttataaatctatggtaaTGAATAAGCATGAAATAgcttttgcctgaaaa aaaactgacttaCTAGCGCCTACTTTTTTAGCTTTGGAGAATTTGGAATA GTTTCCATTCTTTATCGTTCTAGTTCGTTCTGCAAAGCACATTGCTCAAA GCAAGATTTATCAGCGCTGAAGGACAAAACACAAGAACATCTTTGTCCGC TTTGTTTGGAAGATGTAACACGTCACGTgaacaaaatcatcaaaactccA TGTTGCAAAAATATGTTCGTTCATAGAGAGTGCGTCCAGGTAACTTTTTG CCATTTTTAATCTTTCTATCGAGAGTGTGTCCAGGTTTTAAACCTTTCCT TAGAGAATGCGTCCAGGTTTTAAACCTTTACTTAAGGAATGCGTCCaggt aactttttttttaatcatttttaacCTCTCTAGTGcgcaatattttttca aaaatgggaaAAGCATTTAACTTGTAGTAGCTTGAGAGTTAGACAATACT TTTGGAAAGCTATTTACATTAAACAGCCTTCGGTTTAAGTCCCTtataaa tcaagtggtcagacAACCTCGTTCcttgcgtattatcagctttttgatgc ttactgatagcgccagataatttatctggcgtcaatcagtactgtaaata aagcctgggatacacggggacgagatTGGTGGTCAGGTGTAATGATCTAC AGAGTCCAGTGTGGTAAAATAAGCTTTCATTTTGTTACAGACACAAGCGA ACAATGCTGGATATTTCTTCAGATGTCCGACATGCAATAATCAAGAACTC TTCCAGAAAGAAATGTCCACATTTGGTGTTTACATTCCACAACGGTAAAA CGATATATTTTTCATTCTACTTTAATTAAATTTcggcaaaaaatcacaaa acaaaaatttctgtaTTTACTTTGTTCGAAATCAGTTGAAAATGGAATCG AAAACGtcatttggaaatttttcagttttattttaTGCGAAATGtccgat tttaaaaatttagtaTTGATTTAATTTTGCTAATCGATCTCGTGAAAATA GGATAAAATTAGCGAAAACGCGAAATTAAAAATCTTGTGAAAATTAAAGC ATTATCTGCAGGTACTTAAAAGGACTTCAAAAGGGGCATCTTTTGATGCC TTCATCTgtacaaatattttcttgtaaagaactttaaagggacataacag gacttgcgaaatttgtaaacaaactgtatgcagcggatacaaaatcaaaa caaatgtcacatgtcaaaataaaaaatcaaaccaaatatggctaattttg attgatcaattgttttacaagtttgttttggacacgtggttcgcgcaatg tttacattttactacttttatgtccctttaacgtCATATTATTTTTGCTG AACTGAGATTCGATATCAAAAGAACCAACCTTTCTGAGACTCGAAAATTT CGATTTCAATGTGTTAaacgaattttatttttcttacagtNTTCCTGAGA CTCGAAAATTTCGATTTCAATGTGTTAaacgaattttatttttctttcag cgACGCTGCATGGGAAAAGAACAATGCGTTCGGTGATTTATTGGAAAGTT ATGACAAATGTGATTCTGCAGAATGCCGTTGTCCGTTCGGTAAATCACAC ATCGAAGACGAAGGGTAcgccctgttttttttttcatttattgtcATATC ACAGTGGAGTCTCCTTAACTCGTACccacacggggaacacaaatttgttc gagttggGAAATTTCGGATTATGGAGTAGGTTTATGATACATTTTAACTG AAGGAACGAGATTGTTCGACTTAAGtaaacattcgagttatagaggttcg agttaaaggggTTACTAAACAGAAAGTACCACAAGCATATTCTCTGTTTC TTCTATTTCTTGCTGTCGGGTCTTGAAACacgtaaaaatgaaaaacttga gTTTTGATAATCTTATTGTTAGGAAAATATATAAACTAAAGGTTTTACGT ACCTTACTTGTAAAATACTGCAGTTTTTCTACTTGAAAGATTAAGCATTC TGGTTAAATTGCCCTAATATGTACTTTAGAATTTCTAGAATGTTGTCCTA GTTTGTCCTCtgtttttggcaaaaacatAGTGTCTCTCGGTAGTGTTTCG TTTAGAACtagttgaaattttgtttttcgtcttgaccttttttttgagaa taatcTGGCccagaagaaatttttttcaaatccatTAAACGTCATTTTAG TGATTGGGACCTCTTGCGATGTTACCACTGCGGTCAAAGTGGCGTTCACC GGGCATGTCTTGGCGCCGACGTCACACCTGAATACGAATTCGTGTGCCGT GACTGTAACGACGTCGTCGGggtcaacaaaataaattctgttGTATCACC GGAACGGCATGGAGAGCGCTGGGAACAACACAAGTTATTGTTGAAACAAT TGCGTCAGGTGAGTTGGAAGCCTTGTTTTTACAAGCGCGTTGCGGTTACG TCTATCTATGAAGCCTCAAAAATTGCAATCGTTTCTTTTGGTTTATCATC AGAAGGAATTAAAACAAATACAAATTATACACATTGTGCGATTTTTTAAA GCGAACACTATTAGTGGTGGGAAATTGAAATTTGGTCACAAAATCGAact attttgcagaattttacCACCATACGTCAAACAGTGTGTAGGggtcaaag tatctcaaataaTTATGTAAGAACACAAACagcaatttattttattttct atcagAAAAAAGATCCGATCTTGCTGTCGTGTGGGATGCCGTCCGTGTTA CGTGAGCTTCACGGCGTCACAAAGCAATGTCGTGTCGTGATCAATCCACT TCCCGTATTTCTGATTGACCGGTTGCAACGACGTCGGGTAATCAGTACAC GGTCACTCATCCAAAACTACGGTAAGCACTAAGTGAGAAATCTTTTATTA CATTTACTTTTGAGAAGAAGGTAGGGGTTTGTTTGGTGAAAGCAAAAGGA TCTAAGATCTTTGATTGTGTTCCACGAGGAAGCTATTCCATTCgtttatt cattcattcgttcatGCATTCATTGATTTATTCCGTcaatcattcattca ttcattcattcattccgtcaatcattcattcattccgtcaatcattcatt cattcattcattccgTCAAtcattcatttattcattcCGCCAAtcattca tttattcattcattccgccattcattcattcattcattcattccgtcaat cattcattcattcattcattccgtcattcgttcgttcgttcgttcgttcg ttcgttcgttcgttcgttcgttcgtttgttcgttcgttcgttcgttcgtt cgttcgttcgttcgttcgttcgttcattcattcgttaattcattcattca ttaattcattcattcattaattcattcattcattaattCATCCATTCTTT TATTTATTAGGAATCACCGTAACAAATCCACCGCCACCCAGAGCTTGGCC TCCCAAGATGCGCAAGCCACGCGGTAAACAGCGCCGCAGGGTATGTAACG CCAATATCGCGCGAAGGAAGAAGTTAGAAGGACAAACGTCCACAATCTCT ACTTTACGTAAGTTTCTATTATTTAAATTCTGAGTTGATACTTGTTATAC tgtgtttcttttttatgcCTTTATGCAAAATTGTTTGGTACGTTAAAGTT GATTAACCTCTGAATTGATTGAAGTTGTATTTCAGTTGCATTTCCTTATT CCATTTTCAGCTGTTCCCTCAACAATACAAGTCACACACTCACACACGGG AAATACCTTACCTGCTCAAAGCGCCTCTCCCTTGAGTAACATCCATCTAC CGAAAGACAATGTGAACAAAACACCTTCACCTTCTCGCTGCGCTAATGGA AACCGACCGTCTGAAACATCAAAAACTCAAACAGACAGTCCTTCTTCAAA CAGTCAAGATAGCCCTACCCTTTCCAAAACAGCAGCTCGCATCTTATCTG CCATCTCGTCCCCTTTTGTGAGTTCTTTTCATCGTAAACGGACGCTCAGT GATACGATTTCGGACGACACGATCAGCGTCAAATCTTCGCCCACCGATAA ACTTCTCGTGCGTATCGATCGTAACAAAACTCGTTCATTTTCCGATAGTA TATTTACAGACAAAGCGACACTCGGGAAAACTCGGTCGTTGTCGGTCACG GACACGGTACGAGACGACGAAAGCGAAGTGACTCTCAGCGCCGACGAATC TTGTGACGAAGACGAATATCTCAGCGACGAAATTCCCTTCCCGACTGTTA AACGACTTTTACCGACAATCAACGAGAATGAtaacaagaaactaaaagaC ACAAAATTGACACATTTCTTCAACGAGAAAAAGAAACCGACGACGACAAA CAATAAAAACACCGacaaacaacctttacatatacGGCGTCGAAACTCTG ATTTAAAAACAATCGTTAAAAATAACCATAAAATTTCCGATTGGTTTAGA CCTGCCACGACGAAAAATCCAATATCCTCATCTGGAAACCATCCGCCTTT GAAACGTTCATCACCGCCCAACGGTAACAACAACGCCACTGTTCCGCCCT CTCTATTTTACAATAAAACACCTCCATTGAATTCAAATGATAACAATACA GCATCATCCTCAACCGTTGATTCTCATCCTTCGAAAGTAAACAATTATAC GAATTCTAAATCACAAACAATGGGACACAATAAAAACATGCCCACGAACT TCAATAACAAATCGCCGTCTTCATTTTCTACAACTTCAACGAACAATAAC AACAGGGCGGGGAAGCAAACATTAAAACGCCCTATTCCCGCCCAAGTACA GTGGATTTCTTCAGATAGTGAGGCAGACAGTCCGCCCGCCAAAAAATCGA TTCTTATAACACGCCCGCATCCTGGGAAGAAATCAAGTTGCTCTAAAATC TCCAGTGCAAATAAAAGACACGATTCGCTAGACTGTCAGCCAGGCCCTTC CTCGTATTATATATCAGACTAGTAACCTTAACTTTCTTCCGCTTTATCCT CTATCGTAATTTTCTCAGGAATGTTCAGACTTTGCTAACAACTATTTTTT GACGAACAAATGGCCGGTCATTCAACTTGAAGATACACTCCTGACTGGGT AATTAAATTTCTAATTTAACTTAAACTTTGTGTTAAGGAAATTGGCAGAC GACTTCTTCTAAAATAGGCAAAAATTGGGAATATGATTTAAAGGTCCagt ttttcaaattcattttcaaattttctgaaaatttgaaactttgaaTACAT CCACCTAAAGTTATCTTTCTAAcgagatatttttttattgtatctttcaa aatgttttaacGGCCCGttttttttacatgaaatttaattaaatttgGGA ATAACTTTTGCTCGCGATGATCTATTCTAATCCATTTTTTCGGATATTCA GTTTTCACATTGTTTATATTTTGTAGATATTTTTATCCTAATTAAAAACG GTTGCATTTTTGGTACTAAACTTGTCTGAATTCTATAAGTGGAAAAATCC ATTCGTCATATTTTATAAGGGCGTAAAGGGCCGACAAGGTATTTCATTTC TTGTTGAAGCACTTCCACCCttttgggacgagatggagtctTTACAAGCA CTTGGTCgattggttggtcgttaaccagtaataaaacaatttttattact tcaaataaccaattattgaagtatcttataaaaactccatctcatctggc aAAAAGCCTCTTTTTCACAGACAGAGCTTTAAAATTCGGGATGAGCCGGA GTTTtaacaagatacttcactaattggtcatttaaagtgatagagatgac gcgttttttagaaaaagtaagaagattcttttattacatcttaacgacca accaaatcaaataagagcttgtaaaaactccagcttgtccctaaAATTCA TACCGGAAACTTATCAGTCAACTTACTATTCGGTCACGGGTCAAATTTTG ATTGATGCAATACAAGAGTCGATTAGTCCAGTAGAAATTCGTCCATAATA gggtcaacctagaaaaaaatattataaaaggtttctatataccgttggaa agataattttatcagctttcaaatgaggggtagagtcaatttttttgtca tggggaaaaaaagttatggac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054996TCONS_00054996Clytia hemisphaericatranscript
TCONS_00054997TCONS_00054997Clytia hemisphaericatranscript
TCONS_00054998TCONS_00054998Clytia hemisphaericatranscript
TCONS_00054999TCONS_00054999Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054997-proteinTCONS_00054997-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_248supercontigscaffold_248:212430..222150 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.07 6.16 4.18 4.61 8.21 6.65 5.43 5.49 3.14 5 4.47 2.59 2.38 2.34 3.78 4.55 5.46 4.72 1.81 2.54 3.46 4.26 11.5 10.84 6.44 7.29 1.7 1.63 9.73 10.27