XLOC_034745 (gene) - C. hemisphaerica

Overview
NameXLOC_034745
Unique NameXLOC_034745
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:244499..248353+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034745 ID=XLOC_034745|Name=XLOC_034745|organism=Clytia hemisphaerica|type=gene|length=3855bp|location=Sequence derived from alignment at scaffold_251:244499..248353+ (Clytia hemisphaerica)
GACAACACAGTACGTTGATAAATTCGACATTTTAGAGCTTAACTTTTTAT
ACCATTACGTGGGATATAACTACAGTGGCAATGGTTTCAAAGCGAGGCAG
TTgctgcactcaaaataattcatGAGACGGAAAATTTTGGTGGACTCTCA
GCTGGTAAATATCATGGGATATGGGAAATATTGATAATTTCAATATGGGA
TATAGATTTACCTGTAATAACCCTTTATTCTAAAGCAGTAAGTAGTAAGC
CCAAAAAGGAGAACTAACAAATCTACACATTCAGATTCTATAATTACAGT
GTACaatcaaaacgaaagtataaaaaaaactaagaaaaactTATTTAATT
CAAAATGGCTCTTTCGTTAGCTGCTAAACAAGCACGAGCGACTATCAGAA
AAACAATATGTTTGTCCAATGTTCGATATTTGGGAGCACTGGGTACTAAT
CTTCAAAGGGGACTGGTAACCAAAGCGCAACAAGATGAGTTTGAAGAAAA
TGGAGTTATTTGTTTGAGAAATGTTTTCAATCAGCACTGGTTGAAGACCG
TCGAGAAAGGTAAGAATCCGTTAACCGTTGTTCAACCTCATATCATTAAC
GTTATTCTACAataattcaaacttttttgaaattacattaaaaagttttc
attgaTCAGCTCTATAATAGTGAGTTTATATGagttatatttttatttac
tcttttgaggacggtagagtgactgaaacAATTTGGAATAATCCGCACTT
CTAACCCGCAAAATCGAGTatggtaaaagtgctgatttaccgtcgtcctt
cAGATCGACATACCTTAGGCGTAAACTATAGAAATATTGCAGCTGGATCT
GATAATCTCCAGAAgggagggctgggttaccagagcTCCCGCTGCAGAAC
CCGTTATTTCATCAGGCCGAATTCTGTATTATTAAAAACCTTTCGATATT
GAAAACCTTTCCGACCTTTAGAGCTTCAGggtctttgaaaaaaattcaat
tgaaTTCAAGACAAGCAAAATCTTAATTTATCAATCTCATACCCCGGGCT
CATACCTTAATTATTCTTGGCCTATGGCAGAAACAAGCTGACCTAAAAAT
TGCAGATAAGGCTTTACTTCtattctaattttctttttccgtTTAGGAAT
TCACCAGAACATTTTATCGCCATCTCTCCATTGTGATTGGCTAACAAACG
AAAAAGATGggaaatctttatttttcaacgaCTATTTTAACTTCAATAAC
ATTTATGAATACAACTCATACGTCAGAGAATCACCAGTGACAGAAATTGC
ACAAGAAATCACAAACAGCAAGGTacaccccagctggcacacaacgttgt
ttcaacgtttatttaacattcacaacgtccatataacgttagatgaacgt
tgaaacaacgttgtgtgccagctgggacatTTCTATCAGAAATTTTCACA
TCTGTAGCTCGGAAGTTAGACAATCGTTTTGGTCTACAATTTGAAAGGTT
TATACCCCTTTAAATCAATTCGTGAGGATCTGGGACTTAAAGTatgggac
ttggtatttttaCTGTTTcaagcattgagtttcaagcccgaagggcaaga
ggcgaaactttaacccttctcatgcaagagaaattgaagcaaCTTATGtc
ccatccaaaacgcacaTAGAACGCACCGTATTCACGACGACGGATTATTt
ccagcgtttgtgtaaaaaccacgtccgggcgttctggatgggaaataaaa
gGTTTCACTCGCCTctaacccttcgggcttgaacTTCCATTGTTTTCTAC
TCAAAGTCAAATAGGGAGGCATGATTGTCTTTAGGAATTCTTATAATTTG
ACTTATGTgctcattttaatgacttttctTTCGATTACAGAAGATGGGTT
TATTCCACGAGCACGTGTTTTACAAAGATAAAGGTTCGATGAGAGAAACA
CCATGGCATCACGATCAAGCATATTATCCCTTTGATGGGAACAAGGTAAG
ACTAAGAGATTGTGAACCGATATGTTGATACGCTGCAAGAAccttttttt
caacattctcaATCGCcaagtacacatttttttccaCAGCCCTGAAATTA
GCCAATTTTATTTCACTATCTCGTTAAGTAAAAGGTTTTTAGATCACCTA
AGCATGGTCGAAGATAGCCCAATATGGAGCATAAagatggtataatatca
ggggtggtcaaagcgaacttttcagaaaataaatgctaagcaaccccatC
TCTGACCCAGAAATTAAAGTGGCTTATAAGAAAGATGTGTAGCAAGGAAA
GTACAGGTAGTGCATTAAAACTTCAGAAGAAGATGATAGATAAGAAAACT
GTTCTTTACTGATGCAAATGTGACGTGTTTTTTTTAGCTTGATTGACTGG
ATGAGTTTCGCATACACTGAGTTACACATCAAAATTTCACAAAAGTAATT
TCGAAACAGTGTCGGGTTTTTGATCGATCACGGTTCCACcaatcatttca
tttcattttactTCATTTCTAGAATTGTTCCATTTGGATGCCGACACGCC
AAGTCAGCAAATCGTGCAgtttgaaattcatcaaaggTTCACATCACATC
AACAAATGGTTTGTACCAAGACTTTTCAAAAGTAACGAGAATTACATCGA
CATTGATGAATTACCACAAGAGGAGCGTGAGAAAGCACATGATATACGAG
AAGTTGTGGATGTTGTGAAGGATGAAGATATATTGCAATGGGATCTCCAG
GTAATTGAAAGATTCATTCACTGCTAGACAAAGTCACAAATTCATCGAcc
gttattcatgatatgcaccattgcaatttcttccgttccacccaatagct
gattggttgaaagtgacgtattgactgcttttacgtcactttcaaccaat
gagctattgggtctatgatgtaatgtcagaagacattgcagcggtgcata
tcatgaatagggaAATATAGATGCGCAGAGTTAACATCCTTTATGGCGAT
AGTAGTTAGGAAGAAAGACCATCAACTCTACCAACTTTAAACTCACTTTG
GCAGCAAAACTCCGGTCAAGAATTTCCCCTTAGGCAAGGTGACTATTTTT
TCACCTAGCTTGCACACAACGTAGTTTCAACGTTTATCATCAAGGGTCAT
CAAACGTTCTATGAACGTTAAGGACGTCAGGTTGACGTTGTTATGGCGTT
CAGTGCTATCTGGGTCGTGACAAAGTAATAGACTATGTTAGTCTTGTTAA
GTTCAAGTAAGGCACCAGCCTAGCAAATAGATATACATATAAAACTTAGA
ATAGGTAAGAGCGGAACCTGCCTCATCTCCATTCGAAATTCGATGGAAAA
TATGACATTCCAAAACTGGATTTTAAAGCTTAaaggaacaatagaatttc
tatccttgGGATTACAAGAAGTTTTCATCCCCACTATGGGAAAGAGTTCC
ACCGGGGCATTGAGATAGGTGTGTTTTCTTATATTTCAGCCTGGAGACTG
TCTCGTGTTTCACATGAAGACAATCCACGGTACAGATTCTTCTTTCTCTA
ATCAAAAGAGGATCGTCATCTCAACACGGTGGTTAGGAGAAGATATCACT
TATTGCCAACGACCATGGCCAACTTCACCACCTAAAGAATTTTTACcgaa
agatttgaattttgatgatttcattGTAGAGAATAAACATTTTATGGGAC
AAGTGAAGAAAATGTATAATGATGGTGAAGAGGATAAATTGTATAATAGG
TTGTCAAGTTAAGTTGGACGAATGgatgaatgaataaatgaataaatgtg
tgagtgagtgagtgagtgagtgattTTCTGAGTGAATGAACGGATGAATG
AATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055137TCONS_00055137Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055137-proteinTCONS_00055137-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:244499..248353 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.31	3.08	6.61	0.51	0.31	6.7	6.87	14.15	8.01	14.47	16.74	6.14	6.28	19.37	25.18	8.17	9.25	2.52	2.13	4.7	4.18	11.32	11.96	10.57	6.66	3.81	4.96	18.71	15.46