XLOC_035961 (gene) - C. hemisphaerica

Overview
NameXLOC_035961
Unique NameXLOC_035961
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_285:584607..594806+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035961 ID=XLOC_035961|Name=XLOC_035961|organism=Clytia hemisphaerica|type=gene|length=10200bp|location=Sequence derived from alignment at scaffold_285:584607..594806+ (Clytia hemisphaerica)
GTTCTATGTAAAATAATCAGAAAAGGTATGGTTAGTGAGGAAAGTCTCTT TTTTGAatgataccttaagggaactattttttgcgggaactaatgtaatt tttgcggaacttaattttgcagatttttgacttcaaagaaaatttgagcc gttctgtaaattactccACCTCCACGTTTTtcacatttgaaaaattctgc gctaacttaattttgcggtttgGGCCAAATCCTCAaaacccgcaaaaatt agttccctttaaGGTATTACTTTGTAATTTTGATCACAGACATTCAGAGT TTTTGTGACAAGATCAACACTCTCAAAGCATCACAGGAAGATAAAATTGC TAGCATAACGGTACTTGACTGGTTAAACTCAGTTTATTTAAATAGAGTGA CCTGAAAAAgttctttctaaaaaatcaaTAACAGACTTGTGACATTCTTC TCCCACTAGCCATATTAAATTAGATCCCAAAGCAATACCACCATGTGCAT GTAGCATTTCAGCGTTGATATAAATTTAAAGTTTGAATGAAAATCAATGA GCTGCCTTGGAGCTTTCTCTACATTTTAACGAATGAAAGATTTAGATGTA CATGGCTGTGTAAGAAGGAGTTGCAAATCTCAGCAGCAAAGGGCATGTTT CATTGAATGCTACAGTTCATCGAAAATCATTTTAAACTGCTCTAGAGTTT TGCAACTCCTTCGACCCCACCCTCCCCTATTCCCCATATAAAAGTCTAGT CAACCAAGTCGGTCAAGTCGGTCAAGTGGATCAAGTAGGCTAAGTAGGTT AAACAGGTTTGAAGAACTAATTGTTGTTTGATATGGCAAAACAAACTCCA TCGTGATCAGAAAAATACACGTCCTTTACAAAACATTTAActtctttttt atctttaaagcttTTCTTTAAATAAACATGGTCAAGAAGACCACCTGCTA GATGAGTTGGTTCATTCACTACCATTTCATATGaagaaagaatatttttc aagaagTTGTTTGCTGGATCTAGAGCGTCAATGTTGAAATCTCCGACTAT TATATCAATGTCATCATAAGCTGTCACTTGTCTTAATTCTTCACAAAAAT CATCTGTCGAGTAATTAGGTGGCTTGTACAAAAGCAAAAGCTTAATAGCC TTATtactaaatgtttttttcagaaatttaatCATTGTATAGCCAGCTAC TTTATCACAATCTAAAACTTGAGTCGATGTATTTGAACAGCATGCACTGT TTTGAAAGCGATTGACTGACATATTGTTATACTCAATATTGAAAGTGTCC AATTTTTGATCAATGTCACTTGTATCACTTGACAAAGAAAGCTGGGTTTC AGTGAGGCACAACAAGTCACTGCTAATGAgatcttttgtcttttttatgt CATCAGCATGTTTTTTCAGAGAGCGTACGTTAAGAAGGGAGACATGCAAA TATTTAGCAGAGAGTTCTGTAACTGATGAGAAAGAAAGATTATTTTGCAA AGAACAGTCGTTTCTTAATCGCTCATATTCAAGACCAGCTTCATTGTTTA CCCGAATCGCGTTTTTATTGTATTCGCCAATTAAGAACAGTCCATTAATG TCAGTAACTCTAGACAAACTAACATACATTTGACCTTCATTAAAATATCT TTGATTAAGTAATTCAAAACTAACAACTGCTGATGTGAGAGTCAATCCTT GTACTTTGTGACTAGTGCATGCGTATGATAAAGTCAGAGGGAATTGTGTT CTTCGTACCATTAAagtattttcatgttttcttttgttctttcttGTGTC GAAAGTAGATTCTGCTCTTTCAATTATAGTCCAATTATTTTCTCTGCACA CATGGTCTAAATTGGATGCTTGTTTACCGGCAGCAGCATCATCAAGCTTG ACATAAATACCTGATATTATGTTGTTGCTATTAAATTTGAACCTCATAAC TGTTCCAACTTGGCCATTAACCAATCTATCTGCAATGTCAATGTTTTTTG TGATAAATACACGAGCACCTACTTTTAAATGAATTATGCGGGCAAGGCCA CCTGTTTCCCCTGGTCTAGcattttcaatgaatttcaaatcATTATTTGT CAAATGTTTTGGCACCTCATCTTGTGCAACGATGGAATACTTTTCAGTTG GTAGCTTATCCAACATTTGTAAATTGTACAAGTCTGCTGGTTTATTTTCT GCGAAAATATGGGTCGTATTAGCAGGGTAATCTGGACTGTCTGTTGAAAT AAATCTAGATTTCAAAagctcttctttttctttgtcaaGTTCACCTAAAC GAATCTGGTTTAAGAGATCAATGAAATCTATATCATCACGCTGCCTCATG ACAGTTGTTAATTCTGCCATTTGGAAAGTACGCCATAATTCAAATGCAAT AATATTTTGCATGGATGAACAATCAGCTTTGTATACAGGGTCCCTGTAAA TTGGTGGAAGTTGATATAAATCACCACACAATAAGACTGACTTTCCAGCA AAGGGTTTGTCTACACCAAATATTTCACGTAACCTTGAATCTAAGTGTCT GAACAAACGACTAGAAACCATAGAAATTTCATCAATCATAATTATTTCAA CACAAGCTAGTTTCTTTTGCAATTTATCTTTGGAAGATGCATTCAATGGA AATAGCTTTTTGGTAGGGATGATCAGACCAGTGTGTATGGTGGTTCCCGA GACGTTGATTGCAGCAACAGCTGTTGGTGCAAGTACAAGAATTCTTTCCT TTGTAGGTTCACCACCTCTGTACATCAAAAGTTTTGACAATGAGTGATAT ATAGTAGTTAGTAAATGGCTTTTTCCCACGCCTCCGCCACCAGTTAAAAA AATGTGAAATGGTTCTACACTTTTAGGTGTCTTAgaagaaaggtttttta caaaGTCCCTTCCCCATTTGTGAATTACATTAAAGACTTCTCTTTGTTGC TGATTGAGAGATCTAATGCGAGCATTTATTTCATTGTCAGGGAATAAAAT TGATTCCATTGGTATCGCTGCTCTGAGTTGGGTACCTTCATTGGTATCAT CATCTGATTCATTATCGTTGGAAGGAGCATTTTCTACCTCAGCATTGGTT TCATCATTTTCCTGTTGTTCATAGTCATTCATATTGAGTACCATGTCAGT TCTAAACCTTTGTAAGGCATCATCTACTAAACCGGCATATGGTTGAATCA AGGCTCTATTGGTCTCAACAGTTTCAATAATACCAGGTTCTAATAGCTTG GCTGTGTAAGAGTTGTGCTCTTGGGATAGTAATTCATTTTCATCATAGAA TGGGAGATACAGCATCAAAAGATGATGCGCATAATCTTCTGGCCTTTTAT TACGGTTAGGTTCATGAAGTCGAAGAACTAGTGGAACTTTCCGACATTTT AATTTCCCTTTCATTGACCGAAGTGGAACAGTCTTTGGGTAGTtgtttgt tgtttgatgatttgATTCAATCAAATTATCTTCAAGTTCATTCGGTTGAC AATCATTTTCATCAGTTTCTTCATACACAATACTATAAAACCTTAAGAAT TCTGCATAACACATTTTCGATACAGAACTGTAAATTCCATTTGCATCAAT TGGCCTATCACAATACCTATCTAgcatatttttcttgaaaattgaaGTAC TATCCTCAGGAAGCtcattaatttcattttcactcAGGCacattttaaac cttttttctgGTAAATTGGTGTTTGCAAAGGTTACACCTGGGTAAAGTTT TCTAAGCCATAACTGTGGCATGCTTAGATAGACTGCTTCTTGGACTGATA CTTCCCGCTTTGAAACATAGGCATGTGCaacagatttcatttgttcataC TTGTCACCACCATTTTCGAATGCATCTTGAACAGCTTGGGTCATAGCATG TGAAACTTCATCTTCTGTTTTGGACAGGTATGCACACATGTAAGTGACAG CCTTGTAATAATTGAACACAGGTTGAATATCTAAATTTGCTTCCCAAGCT TTTAAACCTTCAGTGAAATAATTATTCACAAAACATGCATTTGTATCACG CTTCAGATGTATATGAAAATCATCATCCTCAGACACTGAGAGAGCATACT CATAatcatattttgaaatattaagtGCAAGAAGAACTTCGTCGATAGAT GGAACTGGACTATAGTTTTCGGCTTCAGTGTCAAAAAAGTTTCGCTTGCT TGGATTGAGGTTTTCATTGATGTAACTCTTTACTTTAGCTAGTGTTTCTT TTTGCAATGTCAAAATAGCTTGCTTTTCTTCTTGAGATAATCCTTGAGGT AAGGGCACAGAAACTATTGTTTGCTCacaaaagaattttccaaaatggAA TCTGCAAggtgtatttttatatttacgacATGTCTTTGAATGTCGATGTA ACTGATATGTTGTAACAAGGTGGAATAAATCAGGGTCTTCTTCCTTGGAA GGAAGATAAACCTTGataattttatcaataaattcaaTGTATTCAGTTTT AGTCTCTAGAGTCAATTTTGGTGCATTTAAAATCCAGAGAAAAGAATGGA TATGAGGGCTTCCTcgtacttgaaattcaactcTAATAGCATAATAGGTT GTTTTACCAAGTGGACCGTCCAAGACAATAGTTTTAAAGAATACTTCAAC TCTATATTGAAAATGACGAGCAACAAGTACTGGATTACTGTTTAGCAAAT CACACCTTTCGTGATATGAAAGATTTTCAATAAATTCATTGGTAACATCT TCACCCTTGAGTTTGTAAATTATGGAAATCATTTCGTTCCAACGAAGATC CGCGCAACTCAATGTGAAAAAGAAAGTTGGTGGTCCCAATTGCTTGACCA TTGCTAAAACttcaagctgaaattttttccaataagCCGGGGTTCCTTTG ACAGTACTCATAAACGCAAAAGCTTTATCATTTGCAATGAATTGCCTCAC TGTTTCTTTAAAGTTTTGACTCAACATACCTGCATTCAAATTTGAGGCTG CGACTTTTCTCATCGCAACATTTATTTGATTAGTTAACGAAACTTGTTGA ATGACAGaattagcaaaaaaaatgtagtctGGGTCTGAAGCAAATTTTTG AGTATAGTTTAACAAGCGTTGATTGAAATACTTTGAAGGACTTAGCTTAA CATCCCGTTCGACTTTGTATCCAAATTGACCTTTAGGAAATAAATGAGGA TGGGCAAGcatttcacaattttcatcATGCAAGATTGAAACAGGCTTTTT CCCTTGACCAGGTGCTAATGTCAAAATTTCATTGTCTAATTCAGCATCTG TTGGGGTGTGTGACATGAGGGTTGTTTCATTTGCGCTTGAGCGAAATGCA TCAAGAGGGTTTGCTGAAGTTTCAAGTTCCTCTAAAACTGTACCATTACT TTGTGTTTCATTGGCATCAGAGTTTTCCTCTTCTTCATGTTCAATCGTCT CTTCAGAATTGAAACTTTCAATAGTTGTATCATTTTCTATCATATTCCCA TCATTAGAAATATCATTCACGTCAATCCTTATGTCCTCATAGAGAGGATT GTTAGCTTTGANgtcggacaaaattgttgtcggaatactgacgcattcgt caaatccaacgtcggatatttttactgtcggactagaaagtgtcggacta ctgacgacctcccTTTTATCCATTTGTAGGGTCTTaaaagatactttgat ggagGAATTCAAATCAGAGGCTCATGGTGTCCGTACAGAGTATGAGACGT TACAAAGTCAAATCGAATTGCTCCGTGAACGGAAGAACAAAAATGATATG TTGAATATGATTGAACTTGAAGAACTTCACTTTTTGTCGTATGATAATTT CGCTATTTTTGGTAGGTCtcatataattttcatttttcaaaaaattttca gagaaaaacTTGCCAGTGGAAGTACCTGTAATGCTAGAAtgcattgactt ccaagcccgaagggctagactcatgactcctggatgggaaatgaagccac ttatttcccatccagaacgacCGCGCGTGGTTTCTACACAAACGcttgat tgaaagtaaaatctatccctatatttcaaaaaatgcagtcctcaaaaaca aaagagCAGCTAAATACAATCCATCGTCATGAATGTAGCGCGTTCTAGAT ggtaaataagtggcttcattttttcttgcctgggaaaggttagagattct attctagcccttcgggctttaaactcaatgctagAATGGAAATAGACTTG CTCACAAAAAGTTAGGTTTCCCATATACATGTAAAATAAGCTACGCGAAT TACTATTTATTTGAGGAGAGGTTCAGGGGAAAAATTCTGAATTATGAGAC CAGCTATTATACAACCAATGTACCAACCTCAGCCCAGGAGATGATGTATT TCTTAAATAATTATATCAATTGTTATTTAGGAAAACTTAAAAGTAAGATT ACTGAAAATTGTTATCCCGGGCGGGTGACGAACCCTGAACAGGTGTTGGC ACCAGTTAAACGTTGCTTCGATGTCCTCAACATGTATTGTCAACTGTCTT TGATGAGACAAATGATGTTGGGACAACTGGCCGCATTAAgtgaagaaaaa caacaaaagaatcTGCAAGATAGTTTCATGAATTTGTTGAAACAAGCACA GACAACAGATCACCAGGTATATATGGCAAaaagtaaagttttaaaaaaat tggacCCCTCCTCCCTCACTTAAAACGCTTCGGTTGGGTTTATGCTTAGA AAAAGtgttttatattatattatattagaTATTAAAAACGAATCAccgaa aaaaaccttttttacggTATTTGCTGAAAAAATTAACCCTTATAAACCAT ATAGTTTTGAAATCGTCTTATCGAGATCTCTTAGAATCTGCCATtagttt attaaaaaatttgaaacgttaattccccttttattcttgttttttttttt tttttNCTCCTCCCTCACTTAAAACGCTTCGGTTGGGTTTATGCTTAGAA AAAGtgttttatattatattatattagaTATTAAAAACGAATCAccgaaa aaaaccttttttacggTATTTGCTGAAAAAATTAACCCTTATAAACCATA TAGTTTTGAAATCGTCTTATCGAGATCTCTTAGAATCTGCCATtagttta ttaaaaaatttgaaacgttaattccccttttattcttgattttttttttt tttttaatttaggttTTGAATTTCCTTGCCAAGCCTATGGAGCACCCTGG CGCCCGATACGTGATTTATTTGCTTTACGCGCGTCAACACCAGTATCCAA TCATTGTTGAGTACTTACAACGTTTGGCAATCCGAGATGAAGTGGTTTCA AAAGACAATGTAgaaattcgaacaaattttgaTAAGCAAAACGCTATGTT TTGTAGCGAAGAGTATTTACAAGGGAACTGCCGCTTAATCAAAAAGGTAT TGAAAAATGACCATTGAGTATTGGACAGAAAAGCCTTTGTTTTGTGGTAA AGTAATATTTGATGTTTAATTCTTAACCATTTAACTTTTATGTGAAACCT GCTATAGCTATCAGTAAGAATATTACTCCTCAACGGACATCATTTCTTTC AGTTCAAAGCTCTGGGATTATAAGGGTTTAAGCGAAGAAATAAAAAGTCC CAAATCGACGTCCTGGACGTTGCCAAAACATGCTTTCAGTACTCAGAACC AAAGTTCGAgcattgtatttttttaaatcacctTAATTCTTTCAGTCCCA TGCACCGTAACTAAGatcaatttcaaagaaaatgacaCTTGGATCTTGGA TCGGATCTGGAGGTCACCTCTTGTTGGTTGCCTTCTTAGAGCACTTGGTT TAAAAGTGGAAAAGAAGTTTGCATGTATTACCTTGCATTTTTTCAGGAAT CAGAAGGCAGTATAGGTCATCCAGACGCCTTTCCAGAAAACTGGGGAAGT ATCACCAAATCTATGTTCATTTCACCAGACGTCCGCGTCAAAGCTAAAAA CGTTGACAGTAAAGAATATATGGGTCCTTTTCATGGTCTTGCTGTTTTCT CTGGTGACGAACTTGAGAAGATGAGTGAGATTCAAGTACTCCCAGGAACC ATTGGAACGACTGATACTGCTGTAATGGTTTGTATAAGTAagtaaaagtt atgttttatcACTCAGTCAGCATTGGATGTTAATACAATGTTCATTTGAC GTTGATGGTCGTTATAGGACCATGCTCGAACGTTATAAGGTTCCACACAG TTCCGAAACAAAAAGTCCCCGAACACTGTGTGAAAGTAAAACGctttcgc tccactattttcatcggaacggaacagCTCCGAACGTTTCTTAAATCAGT ATGATTACTTCCTACCCGTAACAAACACCATACCGGAGTGATGCGAAACT GTAATGTTTGAATATGGTCTAAGAAATCTAACCAAATCCCATTAAAAAAA TCAGCTAAATATCGTACCCCGTCAAAGACCCCTTCATTACTTCTGTTTCA TAGGATTTGTGTTCTAGTACATGATGATTTCTACGTACTAAACTTTCTGA CtggaaaacaatggaattcgaaTCTCCAGCAAAAAAATCGAAGGAATATA AATCCCCACGGAGTGAGAAGGGGCTAACTGTAAATTACATATAAAATAGC ATGTAACAGATGCATAGATCATATGAAATAGGGTAATTGTGTTCCCGCTG TGATGTACctcgtttttttatttaatgtttTAGAAGAAGGCTGGTGTCAA GTTGTTGAAGAATTTTCATTTGAGCAAAACCTAAAAACACTTAGTGGCCG TGATTTCAGctcaatcaaaacattgatcatACCTGAAGGATACCAAGTGA CATTATACGCACAAAATACCATTACAACTAACAGACAACTTGGACCAATA TTTGGCCGGATGATAGTGACAAAGTTTTGTGATAGTGATTGGGATGAGAT ATTGGTGAGAAAATCCGATTCTTCAGCAGCACATTATCCTGTTGTTTGTG ATGAAGCAGGTTTCGGTGGATATTGTCAGCAGCTTGATCAACGGTTCTTG GATAAAAAGAAAGAGCTTGATTCTCTGGAAGGTGAGCTTTAGTCTTTTAA ATGCGACCGTAGTGCAGCAGTAGAGCATTCGGCTACGATTCACAAGGTTG TGGGtacaacccccagccgggttataccaaagattctcaaaatggtactc gatgcctctctgcttcatgctcagcaattaagagaaggttGAGCAATCCA GGGTAAAAAAAATgatgccctcccctaccttcgggtagatagcaaTCGAA AgaagagccttcgggtcgcttCCGATTCCGGTCACAGATTTTCTTACTTT AGTTTTAAAGATTCTCTATTTGTCGTCATTCAAGGATGGTTTGCACGCAG AAATTTCTGGATATAGACGAAGGCCAAGTTGAACTAAATCAGAAATGAGT TCTAAAAAAGTTTGAGTTTATCGAaccagtgatattcatattggaagttt agaTGTGGCTTGCTCGGGTTCTGTTCAGGAATGACGTTCTATTTGTGAAA AGTTGTAATTCGAAACATTCTGATCACTTTTGCATCTCAAAGAGGTTTTT CCGAATACTCTACTTTGTAGAGCCGTTTTGATATGCCCAAGAAATCTCAG AATTTATTTGATTTAGTATCGACTGCTAAAGTATGGTCTAAATAAATTGT ATCTGCTGATTAAGAGAATGTTTACGAAAAGATCAAATCCTTTAAATGAT GCTTATACTTTCGATTTCAGACGTTCAAGAAAAACCACGCAGTGCTCCTG TCAAATACTCCGTGTGTTCAGCTGATGGAGTGCAATCGATGAAGATTCCG GCTGGATTCAAAGTCAACCTTTACACCAAAGATGACATTCTCAATGGGCC TCATACAGGTCCTGCTGAAATGCCGTCTCTTGGTGCCATTGATATCACAA AGGCCTTGGTGGAGAAAATTTCAGAACCACCAAAGTCACCCGTGAGTAGA AAAGACgaagagaaaaaatcaaagatcgTTGATGATGAAAACGAAAAGAA AATCGTTAATTTACTTTCCAAATCAACTCATAAAGAAGTTGACGAGCACT CTTCAATTGGATCAAAACGTGACATAACGCATAAAAGAAATGCATTGACG CCAGAGGATATCACCAaagcttttcgaagattccaaaaaaatgaagaatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057084TCONS_00057084Clytia hemisphaericatranscript
TCONS_00057085TCONS_00057085Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:584607..594806 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.42 0.4 0.43 0.7 0.45 1.23 1.45 0.91 0.71 1.29 1.01 0.49 0.44 0.58 0.81 1 1.15 1.58 2.16 1.5 1.71 1.05 1.08 1.1 1.15 0.8 0.61 0.35 0.26