XLOC_037406 (gene) - C. hemisphaerica

Overview
NameXLOC_037406
Unique NameXLOC_037406
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_327:431865..438313+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037406 ID=XLOC_037406|Name=XLOC_037406|organism=Clytia hemisphaerica|type=gene|length=6449bp|location=Sequence derived from alignment at scaffold_327:431865..438313+ (Clytia hemisphaerica)
ccgttttcccgtcaaaatttttgctgaaccctggaatcccgaaaattgaa aaaagtaataacaccgtcacaccggcttaTACTGGTTCAAATACCGCCAT AATGACAagataaggccaaataccgtcaccgtctgattttaaaataccgt tttcccgtcctttttttcgtcaaatcccgtaataccgtactaaaaaaaaa gggccaatcccgtcacaccgtaaaagtacaaaccccccccgACAAAGCCT AACAGCCTGTAAGTTGAGAGCTGTTTCGCAAATTGCGAATCAAGCTTCAA AATAGAGGAAGAATATGCATTAGAAGGAAGAATATGCATTAGAAGGAAGA ATATGCATTAGAAGGAAGAATATGCATTAGAAGGAAGAAAATGCATTAGA AAGAAGAATATGCATTAGAAAGAAGAATATGCATTAGAAGGAAGAAAATG AACCACAATATTGAGTtaatgaaacttttttatttgtcTATTATCCCAGC TACTACAAACATTTGGGTTTTGTCCCCAAGGTTGCATACTTGCGTCAGAT TTGGTTCCCTCACGACCATAAAAATGTAAAACTACATGATTACCCCCTTC TTACAAGCTAAGAAAGAATACTTCATCttccaaaactttaaaaaccAGGG GGTATGATCTTTGAAAGGTCGTATCGTATATAAAAGGGCTTTAAAACTTT TCTAAAATATCGATTAACGCAGTTGGCTAAATTCAGAACATAATACACAA AGATAGCAATTGATAAAATGATCAAGTTACTCTTAATCTTTGCCCTTCTT GGCCTAACATACGGGCAATGCTCAAGATTTCCACACTGGCCCAGTGAATT TCGTTGGTCATATGCAGGAAATCTTGGTAATGGCTGGAAATGCACAAGAA TTTTGGAACCATCAGATCCACACACATGGGCGGACAATTACTTTTGCGAG CGAACAGGACCAGCCTACATTGCAAGCGGTATGAGATGGAGTTACGCTGG TAAGTAATGGAACGTTTTtcaacattgaaacaacgtttttcgGTTCTCTG CTAAGTTTCCTGTTAGCAacagaaaatattctttaaaaaattgataatta ttTCTTCATCTCACAACAGGTCCTATCTCTGGCATGAGATGCACACGAAT CATCGAGTTCAGTTCACCAGCCAAACACACATGGCGAGATAACTATCTAT GCGTTCCACATCACAGCCCCTTCATTTTTGAATGGTCGATGGCTGGACCA ATCCCTGGAAAATATTGTATACAATGGATTGAACCATCAGAACCGCTGGG TCATACATGGCGTGATAACTTTTTGTGCGCTACCGTGTTCCCACGTGCAC GACTCACCTACAATTAATTTATTAACaatgattgaaatttgaaatagacG ATTAGATTACAATAGTTTGTAGACGATGACAATAAATGCAAAATCTTAAT TTGACTTTTCAATACTCCAATCTTTAATTTCTACTCCAATTCTTTTTGGA AAATACTCATCTCGATGAGAAAAATCTGTCAGAAACTTTTCTATATTATA AAGTTGAAAAATGGTTCAGAATGCACAATAGTAGaccttttttacaaatt aactCACGATCAACGCTTATACCTAGTTTTCAAAATGTCGCTTTGGTAAT TGATTCTCTGAAGAGTTCTTAAGAAGTTTACTCTTTTAATCAaagcaggg atatgttatagcggagctggataaaggacgagaattccttggcggattgc ttctttgtcttttatattgtaaactgttcataatagaaatccatctctgt ccccttcagtggtctgtttttataagaaaaattaagcagacaaagtattc atgcagtactttaatcgtagaaattttagcgagattaattttagcgcata ttagcgagtcaggaaaatcttgattttttttggatttattttagcgaatc aagatttcaaaaaattttgcgtggataaattttagcgaatactcgtctga caaaaatttcgcgtggattaattttagcgaggggaatgattttgaggaaa aaataatgtgttttaatacaaaaatcaaTATAGTCACATGTCTTTGTAAC ACAATTCTTGACTAAGAacagaaaaactttgaaatttacGCCCATATtac tagtttttgaaaaaaatatgaaaatgataacaaaatgataaaaaatgaaa gaaaaaacatactggatttattttagcgaatcagcTTTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTCAATTCGGTgcgttttagcgagatttatttta gcgaaaatagggaaaactcgctaaaacgctaaaattagtctcgctaaaat ttctacgattaaagtacgtttgcacatattttgctatgatgttcccgctt taaaataatatttgcagaAGATACCTTAAAGGCTTCCTTgtaattttatc agcgtgtgttatgaatttgatcTGGCTTTAATGattcctctttaaaaatt tcggatgtaaatattttgacaaatattgtttcaattgacttgaaattttt tccatagtCAGATTTGCTATCTGAAAacatcagttagaaagtgaggcacc cgcggtgtagcgcggtatttcaaatggaAAAatgctatttataatcttac agaagaaatttcttataactttactaatgaaaacaatgtttttcattttt aatttcgcatagcgaaagtattacaatcgGTTTTCTGCGGTCGTAGTGCT AAAAATCAACACTCAGCACTCGTTCTTCGTGTTCACAGTGCTCCACATGT TCTTCTAGAACATTCTAGAATATTCTAAAGATGGACTCACGCACAAAGAT GAATAACAGCGTTTCTTTAATGGTTCTACAAGGTGAATGTAACCAAGGGT GTGTAAACATTCCTTGTGAAagctttttaatggctgcttgaagTCAACAC TTTTTGTACACTTTTCTCCTGCTGTGTATATATTTTTAGTATGTTTTCTG GTAacttgtagagtatttaaagaggtttgtCATTCGTTTACTacttagta ttttatgtttgtgtagttattGAATGCACCAATAAGCTTTTACAGTGCAC AGTAGagttttttggctatttttttaCCACATCCCGTACAACAACTGACA ACAGAACCCTTCAATACAAAAACACaggtataatattttttaacaattaG TCATAGGTGTTGATAGTGAGATGAATAGAGCTTTTCGTCGTTGATCACAT TCATATGGAAGCAgccattttttatacaaatcaTAGATTGCCGAAATAGA TTTGCATGGTTTTGCATGTTTTGCATATATAAATgtagaaaatgacgtca ttttcaaaatgatttatcttttttcaatttatgaTTCACCTGTACCTGTA CCACAAGCGCTGTTTCGTGGAAATAGGGTTTTCTGTTGTTATATAGacca caaactttttgatttttggtaatatTCGATCGTGTGTTCGATTGCATTGC GTTGTTCAAGTAAaacgtttgattggtttgattgattgtaaattaccttc gattatgtttgattacgattatgttctaTTGGGAAGTTTGATTGGGATTA AATTAGATTGGATCACttctttagagcttttttagcgtgGACGGCCAAGC GCGTAAGTATATACGGTACGATAGTGAATAAAATCGAATACAATTAAATC AATCGAGTGTAATCGAACATAATCAGTACAATCGAACGNGTGAATAAAAT CGaatataattaaatcaatcgaGTGTAATCGAACATAATCTGTAATCAGt acaatcgaacggcaaatccttggtgatattcgattgcgattatTATTCTa ttgcattcaattgattcggcgttcgattcattcgattgacaccgtctggc catAACATGTGAAGGTGGAAATCAATCTACAGTATATNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNATCTATTGCTAGTCcggatgtcctgttgaata attaaaaactctagcACTAAAACAATGACCACATATAGCACATAATTATT CTGAttatgcatttatttttcttacagtAATTATTGTTTTGAGGCTGGtc tttttaaattattcaacatccaaaagcccattaactgcctaaattgctag agacgctccgagcgtctctatgtcataaatttcacgttctcctttcataa tttacaaaaggagcatgcttttcactttcgaattctgatttcgtctattc agaaaactgtgataatatcgtaaaaactttttttttaaaccagaggatga ttcctttttaaactttggtttaacttatGAGGAGCGTGCagctaaataca aaaggaaaataaaagaaacatgtagagttaattactttaaaccttggtct gaacacgaccGAAATGTTCAAGGGAGTGTAATAATTACCTTTATTCTTAA TAAGAGACAGAGGTGAAGGCTGTGCACTTCTTTGTTCCCGTATTTTCAAG CAACTTTCAAGCAACAGAGTGAATACACCCAAGGAAGTCAACAATTTGGA GTAAAGAGGTCGGATGATTATTCTGACAAAACAAAGAAGTAAAGGCGAAT TTCGCTTTTAAAAATCACTCGAGTTTACTggctttttcttcttcatttct ttCCTTAGAATTCTCTCTATGCTAAATAAATGGCCATCATCCTTATAATC ATGCCATACTTAAAGACTAATCACTATCCCAGAACTAAACAATGTCCAAG CCGAGAAGAATCGGTTTTATATTTAGTCTCCAACCTAATACTCTCCAGTA AAAATTGTTCTCGGACAAAGATACTGGTATAGTTTATGAAAGgttgcaaa aacaaaaatgaaaaactgaaaaatcttATACCTGGTTTTCAACAATGATA TGAGAAGGACAATGATGACCGAAATGTTAGAAACATGAAAGATTACTCAA AATTCAGGGGTAAAGTTCTTTCTCGAAGGGTTAAATTCTAATCACCATTT ACTATAATCTCCCAAGTTTTTTCAGGGAAGAGAGGAGAATTGTTCATAAG AAGTCAGGGATAATAACTCTTAGGAGGGCTTGGAGCAGTTTAGATATGTT TCAGTTTGGGTCAAGCGCAACAAAATAACTGACTGTTAGCTTCCTGAAAG ATTAGTTTCTGTTGCTAAATACTTCCCCCTTATCCCTAATTAAACACTTT CACTCAAGCATGTAGTTTTTGTAATTAATGTTATTAAAAGATTGGCTCAT CTCCAAAGGAGCTAATAGTTATTCTTTTATCATTCCATGCGTTTTCAAAA GGAAATCCAAAAGAACCCCGAGATTGCCCCCTCATCATATGCAAAATAAG AATATATTCAACTAGAAAATCAGGGGGTTTGTCTTACAATGTCAATATTG TATATAAAAGGTCCTTACAAACTCAAAAAGCATCAGGCAATAATCAAAAG ACAACCTTCAAAGAAGATAATTCATTCAAAAAGCAACACGGTTGACAAAA TGATCAAGTTACTTTTAATCTTTGGCCTTTTTGGTCTAACATACGGGCAA TGCCCAAGATATCCTCACTGGCCACGTGAATTTCGTTGGTCATATGCAGG ACATCTTGGTAATGGCTGGAGATGCACAAGAATTTTGGAACCATCAGATC CATACACATGGGCGGACAATTACTTTTGCGAGCGAACAGGACCAGCCTAC ATTGCAAGTGGTATGAGATGGAGTTACGCTGGTAAGTGATGTAACGTTTT TCATCGGTGAACATTTTTCGGACCTCACTTTAGTTTCTTTGGAATCTTAG ACTTTCATTAACTTCCTGTTAGCAACAAAAACCATTCTGtggaaaattga taattatttCTTCATTTCACAACAGGTCCAATCTCTGGCATGAGATGTAC ACGAATCATCGAGTTCAGTTCACCAGCAAAACACACATGGCGAGATAACT ATCTATGCGTTCCACATCACAGCCCCTTCGTTTTCGAATGGTCGATGGCT GGACCAATCCCTGGAAAACATTGCATACAATGGATTGAACCATCAGAACC GTTGGGTCATACATGGCGTGATAACTATTTGTGCGGTACCGTGTTCCCAC GTGCACGACTCACCTACAATTAATTTATTAacaaaatgattgaaatttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059422TCONS_00059422Clytia hemisphaericatranscript
TCONS_00059423TCONS_00059423Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059422-proteinTCONS_00059422-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:431865..438313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5 0.26 0.12 0.19 0.66 0.65 12.24 13.89 260.68 64.17 265.49 655.33 513.92 593.48 714.96 682.69 284.15 190.71 89.22 82.08 0.46 0.25 0.04 0.25 0.7 1.03 0.4 0.27 0.23 0.22