XLOC_037623 (gene) - C. hemisphaerica

Overview
NameXLOC_037623
Unique NameXLOC_037623
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:506593..510341+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037623 ID=XLOC_037623|Name=XLOC_037623|organism=Clytia hemisphaerica|type=gene|length=3749bp|location=Sequence derived from alignment at scaffold_331:506593..510341+ (Clytia hemisphaerica)
GCAAACCAGAGCGTTTGGAAGATGTTGCAAAGGACGAGAAATTGATCGAA
AgcgatgaagaagaagatgttATGTTGAGCAATGACAAAGAAGAGGCGGA
TACAGAAGATGAACCAAAAAGCGAAGAGTTAGATGAAAAGAAAGAGGACG
AATTGAGTGAGGATGTGGTTGAAAAAGAATCTGAAGAAGATGAGCTGGCA
GAAGAATCAGAGGAGAATAAAGATGAACTGATTCAAAAAGGTAtggaaaa
tcataaaaaaaagtctattgaGGTTTTACGTGTTTCTAACCtgaaaagat
ttgtttttatacaacggatttctataattcgattctttctataattcgaa
ctaagcCTCGTagaatactctctgtaattcgagtcTTTCTGTTATTCGAC
CATAGTAGACTTCTTGTTCGAGTTCAAATTAACGAGAGTTAACTGTAATA
GTGAAAAACGCGAAACTTGCAGTTAATTATTGGCAACGCTAAAATTATGG
TACGGGAATTGTCCTGCAGTAATAGTCAAACAAAGCAAATActttaaatt
tcagctgatGCTCCAACTCCAAACGAAGAAAAGAATGAAGAAGACGAAAT
CGTGGAGGACGAACATAAGGACGAAGAGAAGAGGAAGCCAGAAAATGACG
AAAAGAAGATGAAGAAAGATGAAAAACTTATTCACAACGATCCACAAGTT
GGTGAGTTGAGAGCCTTACTGGTATTTTTTGGGTCGACAAAATTCATTGC
GAGCTAATAGGTGTTCGGTCATAAACAATAGAGCTCAGTATGCAAAAATA
CTGATTATCGGAGCTCTGAGGAATAATCAGGTTCCTCATGCTCGTTCCTG
ATGCTCAAGCACTGATGCCTTTCATAGTTTTACTCGCgaaaaaagacttt
caaaaggATATTCTCCTATTTCCTTGTAGGTTATACACttcgaaaaaatt
tcattcACGACGCTTTCGAGACTTGGTCACCAGATTATAGTGTAGGGTTT
CAAATCAAACCACTCTACATCGTCAACCATTGGACCAGTATCATACATTT
TACAACTGGTGGGGACTCGGGAGCTCACGGCCGTAGAGTACCAGCGGTTT
TTATCGAGCCACATACCTCAAAACTTCATATTTGTACTAGTTTACATAAC
AGTAACAACTGGTGTGTCCATAGTGCTGCCTTGCCTCTTCACAAATATAC
TTATGTCTCGATTAGCCAATCTCCCAATGGGGCGAAATATATGTATCGAG
TTTGGGTGAATGGCAAACAATTAACAAACGTAGAGAACAAGACTCCGAGA
TATTTCCAGAACATTAAAGTGTACAAAGCAGATAGATGGTACAATGCAGC
GCCTGCCAATATCAGAAATCTTTACATCAGTGGTAACCAACAGTACGGTA
AGGATGGATTCCTTTGTAAGGGAGGACCAAGCTATATTTATCCGCCATcc
ttgatcggagttttttttgaattggtacccgagaagaagtcattgcaatg
ttaaaaatcaccaaaagcatttgaaagaaagtagatctagcgctctcgat
gcatttacaccgctaatGAGTAGTgctgccattagggtaccacttttcaa
aaaactccgatcaaagattttgcttggccgggattcagaaacttggtcca
gggatatataaaggtcagtggggaGGACCCATTACTATTCAAGGTTATGA
ATTGGACTAAGCCAAATGCTTTAATTTTCTGTCACGGCCACTACTCGGCT
CATGGGAGAAGGAGTATTACAAACATATTTGAGAAACTAAAATATAGAAT
TTTCAACAAGCTTGTTATTAAGGTTGCACAACCTTTGGCTTCATTAATGC
TTAAACTTAACTTAATAATAAATTTCCCTTTTAGTCCGCCATCCCATCCG
AAAAAGCACTCTCATCAAAACATTTCCAACCTACTTTTCCGAGTACGAAG
TATCTTTCCGTATCCGCCCCACCGGAAAAGTCAGCACATGGTCCAATATA
CTTCACGTTACAAAAGGTGGGGATCACGGAGCACACGGAGACCGAATTCC
CGGGGTCTGGTTCTGGCCAAACACCAATAAACTACTCATCGCAACATCAC
GTGGTAGCAACAAGAATTATTATTGGACCAGCCCAGAGTTACCGACAATC
AAAGACACTGAAGTCAATATCAAGCAGAAAGTGGTCGGTTGCTGTACCCA
TTACTATACAATTACAATAGATAAAAAAGTAGTACTGAACGTTGTCAACA
GCAACCCAAGAACTTTCCACAACGTGAGAGTTTACCAGGGCGATCCCTGG
TATGCACCAGCTAAAGCGTACATCAGTAACCTTCAAGTCACAACAACCTC
AGGAGGTTAGAAAATTTCGAGTTCACACTTtcattattttctgaaaaaaa
agaagcctttcaagtgttctgatgcaaattcgatttttcccTACTGTGCT
ACAAGAGTCttgaaagtttaaagtgactaaagttaaaaatcaaaaacctg
ggccccaaaaacatcaaaattcgcAAAGTAgaatcatagatttataaagc
tcgAAGGGATAGatgctcttccaagcaaaaagtgaatatcgcaaaaaaat
attgctgctattgttttcgaaaacccgcgaagattctgattggtcaagcg
ctggaattctattgtaatgtgacgtgacttaggtaggatttcctacctaa
cctcggcacacttttcagcaaaagcacgatatctagcccttcgggcttta
caaatcTACGAgtagaatagaccttttgcgTCGAAAAAGCCTTGACGCCT
AGCGTAGACTATAAAAAATCCATTTCTTCTCAATGTTTCAGGTGGTTACA
AACTTTCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGAGAAGCAA
TGGTATATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGAACCACTG
GACCAACATTTTACACTCCACTATCGGCGGCAACGACGGAACATTCGGTT
ACCGTATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCTCCATATC
TGCCACGCCATCAACAATGACCCTAGTTATTGTTTCAACACACCAAACCA
TGTTCCGCTCAACAAATACACTAATGTTCAGATCGCCCAAATCTACGAGA
CCGATTATAAGAGATATCGATACACCATCTTAATTAACAGAATACAGAGG
TTCACCATCATCAACAACACACCTCGCGTTTTCCATGACGTCAGATTGTG
GGGTTCAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAGAATGTTG
TTTTCAGAAGTATTCCACACAAAAAATGAGGGACttgcatttttttaaac
ttcttaAAGGGATTTTAATTATTCTTGTCTCCCGAAAAGACGGGGGTAGG
Aaagttttctaaattctaataaacgggggataatttgaagacagaatttt
ttttgactgatatcaattttaacatcaaaaaataaactctaacaaatgaa
cacgtgtAATAAGAACCAATATTAAcaaaagggaaaattttaacatgttt
aaggtctatctacactgtaataaatattgaattattcgaatttaattagc
gagggggggtcttaataagagcgggggatggatttttttctcttaacaat
tagagggggacgtctattcggtaGACAAGGGTAGTGTTTGTATTATAACT
TGAACTTTCTTTATTgtctttataaattttatatcaTCCACTTCTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059801TCONS_00059801Clytia hemisphaericatranscript
TCONS_00059802TCONS_00059802Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059801-proteinTCONS_00059801-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:506593..510341 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.55	1.09	4.01	3.25	0.27	0.11	0.16	0.43	0.26	0.55	0.45	0.22	432.46	530.69	216.74	379.31	124.92	133.17	1.38	2.08	0.25	0.29	0.23	0.23	0.13	0.16	0.23	0.36	0.5	0.27