XLOC_037628 (gene) - C. hemisphaerica

Overview
NameXLOC_037628
Unique NameXLOC_037628
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:676299..685200+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037628 ID=XLOC_037628|Name=XLOC_037628|organism=Clytia hemisphaerica|type=gene|length=8902bp|location=Sequence derived from alignment at scaffold_331:676299..685200+ (Clytia hemisphaerica)
GATTTCCAATACAAGTTGGGATTGAAAATTCTCCAAAAAAATGTCTGGAT TTAAAAAGCTTAATTCTAAAGAGGTAAGTCTattaattataattttaatt attttcaaaatattgtgaaattttattgattcattgatatttttttcctt cctAGGCGGGTCAAGTGGTATATTTTGACATCTGTTTGTCTAAAATGTtg taaacttttttatttcgGGATTTTTGGAGTTTTGGCGGAACTAACTTCGG AACTAAATTTCggaatattttattatttgtgACTTTAATATGAAAGagaa tcaagaaaaaaaacttagGGTAAATAATGTTTATCTTACTTTAATATTCT TTATATTCTATTTCtaaatttgacatatttttccTAAATTATAACATAAT CGACATCTTAAGGCCTTAAGATTTGTTGATACAGTAGCGCTAAAGATTTA ACTGATATCAGATTTTTACCAATACCAAGAAGATTTTAACTTTCTACGAT GATGAAGTCGCAACAGATTAAAATAAGGCAAAACGTGAATTTATATTGTG GCTGCCATTCTTACAGTGATTTAGAACGGTTTAATAAAGAGGTACCTTAA AGGCCGTTTTCCACTTTCGCGCAAAATGGACCGTTTTTTCCTCAAccgtt tttgcctgaagaaaagattacgtcatataaaAGTTTTGTGCGAACAAAAA ATTTCACTCATTTCGCACGATAGTGGAGACCGGCCTCACGTACAAACCTT GTGAAAATCTTTCCTACAGTGGAAATGAAAATCCAGTGGTAAtagcaaag atttattatacactggataaacgactcataaaacgatggagagcgatcat tgtattttcattgtttcagaaaacaattgatgttcaagCTTTGTCCGCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNtgtctgatttttaaaaatgtttatcagtcttatttttaaaaagttctc tagctctttctttttgtacatttgcagaaaaaaaagtttgaaagtaaggc taacATTCCAAGCTGGATctatttgtgaaatctaatgtgagaaaaacatc attagacaagaaattcagacaaaatgcttacagtgacacgaaattttcaa ttggaaatatatttccaagactgtccccagaagaactgaaattaacatac ataagacttatatgtcttggctccactgtggtatgaaaatcctttggagg cacgtggtggcaaggtggtttttttgaggttaaagtttgaaaatttctgg tgtcaacattaaatttcctatacacaacacgtcttttgcatctttcttac agcttgaaacgtcataacgacttatcattagcaattaagtggaagaatct gactctcacaggaaagttttaagtctcttttgggaattggatgagtgatt ttcgataagaaaggccataaaaatgtttcgaaaaatcatttaatgaggga aggagagtgaacaataacatcattactgcggacatagctagtacacgaga aatcggcaaaaatatattacttgtatatccagtgtatattAAATCCTTGG TAATAGTTTTGCAGTTGATTTTTtcccattgaatttcaaatggagataaa ataaaattcaatttcccagtggggctattTTCCCATaggagatgaaattt tgaccgtatcttttccagggggtctgtgAAACGAGGGTGTTGATGAGCGT CAAAACAGAGTACTGTTTGACAGAGCCTATAGCATCGAGAGACAATCGTT GTTTGAGGATTGATGTATCAACACGTTCTATAACCTTTTCTTCAAAGTTT TCACTTTCAGAGCTCCTATAGCATTTGAATGTCAACTTGCATACGATAAT TAACTTTAACTTcttatgttttgttttcttcaattttagagAGAGGTACT TATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGTGTG TTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGGCTT TATAACATGACCGAGGTAACTTTTGTTTCCATTTTCCCGGTTCAAATGTA TTCCTCATTCATTTATGGTTAAACCCTGTCATAGTTTCAGGGGGTACTGT AGGCTACACTCGTCCCCTCTAATATGTTTAGATATAGGGGATgtgtatcg tgtataaaattcccgtgcGAGGGTTACCCTCTTTACCCACCTTGTGTTTT TtggttttagaaacttgattatcTTTATTAGTCAGCTTTATTTGAGAGAt cattaaatttgaattgaaaatttgatcGAATAGAAGTTAGcacaatcatt ggatttctaaacctctttaagaaaattgaaacagataaatttgaaataac GCCCGGGACAGGAATTTTATTACCCTtaatcaaaacatatcagaggtgAC GCATGCAGCCTAGGGGTAATGtctattttaaaaattgattgcACTTCGTA ATGATTCTCATACAAGAAACACTTCGAATTGGGGGCTACCCACATTTAGT AAGCATGGAAGGGGGGTGCTAGGTTTGCGAAGTAACAGGTATGACAAGTC AAAAAGTGAAAATCctttaaaacaaaagttattgaaattttttgagaccc ttttagagaatttttgtcaaaattttggacaactttttcagaaaatagtg ACCCTTTGAGAAGGAAATTTTCGCTTttagtgattttgggaccctttgag agactaacCTATGAATATGTAGCCCTTTTAGGGACTTTTGAGGCATGAAA AAGGATACATATACCACCTGTTTTttcctaagtaccccccccccgggtta acATGATAAGATCTTTTGCATCCTACAtagattatgattttttgattttg atattacaGAAAACATTGTATCAGGATACTGAAAAATTCATTGGATTATG GCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTGAGAGTTGTG TCAACTCTGGTAGTGATGTTGAAGGTAATTATTCGTCATTTTCGGTCTCA AAAAAGCTTTATTATTGACAGCTGCACTTGTAAACACattgaattgaatt tcaataatgGGGTGGAATGAAAGTTGATTTCCCAATGGGGCTTAAATTGT AGGGTTTTTTCCCCACTGGGGAacaaaatttgggccaaattttcAAGTGG GCTATGCTATGGGCACCGGGTTATGTGACACAATAGACCTTATCATAAAT TACTTGCTTCGCATTCAAACAGATTCCAAATGATTTTATTATGAATAGAA GGTAGTTGTGATAGTTGtaataaaatccactgggagttaGCCAGCAtgga aataatttcaaaacgaggcagtggTATTCgggacgtaatttatgaaaagg tctattcttgaATAGATAATTCATTCATCCTTAATCAAATACAACCTTCT CCAGTCCTCAAATCTTAAAATTGAGAGTGTAGTAAAATTCCAATACAGTA GTTAGACGTTGGATAGAGCCTGCTATAAGTTAGTAGATTCTACTTTtgga tttttgataatttttttatgacgctgagtccagtgacgtagactaggagc atttggcgaggtcgcctttttcaaaaaaaaatgttgaaaatccaaattca tgatatgcaccactggagagtcttccgagaattttcaaaatattcaaccc aatacgtcacttaaacaatagaaaaagtgacgtattgggttgaaTATTTC GAAAGATGTAGGAATACTCTCcggtggtgcatatcatgaataacaataaa actacttggagttgaaagatataatcaataattagaaacaaacacgatta acagatttgcgatcccttattctcaaataaaaacattgctccatactgtt tttaccttccaaaagcaactaaaatctggcggactgttttacattccgcc taagcaaaagaatattaccatatactaccggacCACTTAAttgcgccatc cagtctatcaaaaagatttaagtggaccccgggctagctATAAGTTGGat tgaaatcaaaagaaaaatgaaattgaagtGGTTTTGAGTGCAGAGTCAGC CACCTGGTTTCTACCATCAACCTCTTATTTTCCTCAAANTACTGAAAAAT TCATTGGATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCA ACTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGGTTGTTATACGTC ATTTTCGGTCTCAAAAAAGCTTTATTATTGACAGCTGCACTTGTAAACAC ATTGCATTGAATTTCAATAATGGGGTGGAATGAAAGTTGATTTCCCAATG GGGCTTAAATTGTAGGGTCTTTTCCCCACTGGGGATcaaaatttgggcaa aattttCAAGTGGGCTATGCTATGGGCACCGGGTTATGTGACACGtagac attttcataaattacttgcTTCGCATTCAAACACGGTGATCATacccctt gagacattaaaaatgattttattatgaatagaaagtagttgtaatagttg taataaaatccactgggagttaGCCACCAtggaaataatttcaaaacgag gcagtggtgtccgtgacgtaatttatgaaaaggtctattcttgaATAGAT AATTCATTCATCCTTAATTAAATACAACCTTCTCCAGTCCTCAAATCTTA AAATTGAGAGTGTAGTAAAATTCCAATACAGAAGTTAGACGTTGGATAGA GCCTGCTATAAGTTAGTAGATTCTACTTTtggctttttgataatttttta tgacgctgagtctaGTGacgtagactaggagcatttggcgaggtcgcctt tttgaaaaaaaaaatgttgaaaatcatgaataacaataaaactacttgga gttgaaagatacaatcaaaaatcagaaacaaacacgattaacagatttgc gatcccttattctcaaataaaaacattgcttcatactgtttttaccttcc aaaaacaactaaaatctggcggactgttttacagtccgcctaagcaaaag aatattaccatatactatcGGGCCACTTAAttgcgccatccagtctatca aaaagctttaagtggaccccgggctagctATAAGTTGGattgaaatcaaa agaaaaatgaaatcgaAGGGGTTTTGATTGCAGAGTCAGCCACTCCTTTT CTACCATCAACTTCTTATCTTCCTCAAACCATCCATTACCTTAATGTTAT AGATTACATTCAAGCAACACGAGCATTTCTGATTCTGGCAACTCTACCAT CAATTTTTGCTTTTATTGGTGGAATTGGTATGTTATGTTCAGATCGTGTC AAAGGTCAAGTATCCGCTATTTGCCACATCATCACAGGTAAATATCATTG TGAAACCTGATCTAACCATCAGACCCCTGTAATCAGGGGATGATTCAGCA AATTCGTCCATTTACTTCATATAGGAGAATCAAGATTTTAACTAACTCTT TGCTCCTTTAAGATATTTGTCGCGTCTAGCAagcagtggcgtggtggcag gggggccagggggccaggccccccccagcggagcccttttgagaaggggc gcccaaaaataagggacgccaagaaggatttttcaggcgcccatatcgaa aaattgacaaatgaaaaaacaaaaatggcgtcctcatcacctcaaaaact caaaattttctggctcgcttcgctcgcacactcccttttttgtgttcata atgagcgtatagagaggggcgccaaaaacaaaaaatcagagaaattttcc caccacgccactgctgGCAAGTTTAAAGGTTTCTAAAATCGAATATGATT TCAGTTTCTCACATCACAtattaaaatgtgttttttcaGCCCTTAATATT GAAATGTCTATCTGACACCAAAAACCATTTTCGCAACCGCAGGGAGTGTT AAAAGACTACTGGTAACAAAGCCTACATCGTATTaagaaaaaccctattt ttgttTATGGTAGTGGGCCTACGTTTGTGTAACTTCTGTGTAAATCCTAT CAGCCCGGACCCCCCTCTATATTACTGTGACCCCTGAGTTTATAACCTGG TTTAATTTCATATTTAGGTGTATTTTTACTTATCGGGATGTCAGTGTACA CCGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTGG TCATTTGCTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTGT AATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAGT TCAGAGAATAATTATTGTAACAATATTCATTGCTTGTTTTCGAGATTAAC AAATGGCTTTGGAAAGCAGTGGATGGAGTGATAACGTGAAATTTAGAATG AGAaataatagatcttatcggagtttttgatttttaaaaaaaagcgaTGC CTGGGATTGTTTCTataacaatagaaatctcttaggaattcctcgaggga attctattgtaatacccccgaaccAATCNtgtttggttgggcgattttgc gccctttgacacgtttttagcgccttctataagtgcaatgtaattttttt ttcgcctgcggcgcttcattcattttattttacgatttttttcaaaacta ctatcaacattgaattgcgaaaagtaaaagcaagagaagtgttgtgtatc caccaggggttaaagaggatgctcatcCCCAAAATcagagattgatcgaa actgctcgctgtggtttttgtggtcttatgcgggTTAAccttctcctttt tagaatatcttataagctgtttgacctttcttgcACCAAATTcttttgcc tgcggcgctagaattacaaagaacccttattcttgccaacttttgaattt ttggggcctctttcagccattgatcttNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNaatttttttgcctgcggcgctagaattaca aagaacccttattcttgccaactttcgaatttttggggcctctttcagcc attgatctttaatggagagtacAGGTAATAACAAGTATAATAACAAGTAA TAACAAGTACCAGGtaataacaaggaaatagatatcaaattatcattacc accaccttcgtataaataaaactttgttaactcagagattccgggcgtta ctttcaaccagtcactgctcttaccaGTTTAacgaggccccccagcggca cccctaatcacgccatcacgcaaaaaaaatttctccatcacgcatcacaa AAATCGATAatatagcgaaaaatagcccaaatcacgcatcacgcctcaaa tttttgccctatcacgcatcacgccaaattcttgatcacgccatcacgcc aaaaaaaatgtttaatcacgccatcatgcaagaaaaaagtcccaatcacg ccatcacgcaaaccgccgGGGGGAGGCCTCTTTAAAAGTTTCACTTACTG Gtagagggcgcaaataaggacaaaaatactaggggcgccaatttcatagt ttgcaccaccaagaaaattaagccaggccgctactgctGTAATCAGGGAT GATTCAGCAAATTCGTCCATTTACTTCATATAGGAGAATCAAGATTTTAA CTAACTCTTTGCTCCTTTAAGATATTTGTCGCGTCTGGCAAGTTTAAAGG TTTCTAAAATCGAATATGATTTCAGTTTCTCACATCACAtattaaaatgt gttttttcaGCCCTTAATATTGAAATGTCTATCTGACACCAAAAACCATT TTCGCAACCGCAGGGAGTGTTAAAAGACTACTGGTAACAAAGCCTACATC GTATTaagaaaaaccctatttttgttTATGGTAGTGGGCCTACGTTTGTG TAACTTCTGTGTAAATCCTATCAGCCCGGACGCTCCATATTACTGTGACC CCTGAGTTTATAACCTGGTTTAATTTCATATTTAGGTGTATTTCTACTTA TCGGGATGGCAGTGTATACAGCTAAGGTGAATGAAGAAGATTCATTCGAT CTTCATAAATACAGTTGGTCATTTGTNAAGGTGAATGAAGAAGATTCATT CGATCTTTATAAATACAGTTGGTCATTTGTTTTCGGTTGGGTAGCATTCG TGTTGACCCTCATTGCTGCTGTAATCACTTTCACATTTGGTGCTCCAAAA TTACCGAGAATCATTATCGAGTTCAGAGAATAATTATTGTAACAATATTC ATTGCTTGTTTTCGAGATTAATAAATGGCTTTGGAAAGCGGTGGATGGAG TGATAACGTGAAATTTAGAATGAGAaataatagatcttatcggagttttt gatttttttaaaaaagcgatGCCTGGGATTGTTTCTataacaatagaaat ctcttaggaattcctcgagggaattctattgtaatacccccgaaccAATC CCACAttgcatcgctgttttagaagaataaaaaactccgataaggtctat tgaaacAGGTGTCAAGACATCATTCATATCATATCATGTCCATAACATCC ATAATATGTTAAATATGGAAGCTAAAATAATCTCGGACATCTCAGAGTTG TAATCGAGCTGAGCAACTGGTCATAAGAGTACCAGAGATTGAAAGGCATC GCGTATAACATTTCTTTATAATGGATTTGAATATTCTTGCGTTGCTTGTG ATGAGCAATGActattaaataattttcaaaatcacaTACTGTATATAGAT CCCGCGGGGGCACTGACCTTAACGGCCGACGGAGACGTGcccggtggggg gg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059821TCONS_00059821Clytia hemisphaericatranscript
TCONS_00059822TCONS_00059822Clytia hemisphaericatranscript
TCONS_00059823TCONS_00059823Clytia hemisphaericatranscript
TCONS_00059824TCONS_00059824Clytia hemisphaericatranscript
TCONS_00059825TCONS_00059825Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059825-proteinTCONS_00059825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:676299..685200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.15 0.12 0.29 0.13 1.12 0.35 0.45 0.3 24.49 24.21 0.81 0.81 0.33 0.1 40.79 44.87 0.59 0.63 0.58 0.22 0.21 1.04 0 0 0 0