XLOC_037629 (gene) - C. hemisphaerica

Overview


Name	XLOC_037629
Unique Name	XLOC_037629
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_331:691487..706734+

gene from alignment at scaffold_331:691487..706734+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037629 ID=XLOC_037629|Name=XLOC_037629|organism=Clytia hemisphaerica|type=gene|length=15248bp|location=Sequence derived from alignment at scaffold_331:691487..706734+ (Clytia hemisphaerica)
aatatAGCTGAACCGATATATGAGTAAGATGAAATTGGACAATTTGCCAC
CTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTTCTATCG
CAATCTTTGTGGTCCAGCAAAGTAGGTAAgctaaaattttacttttccaG
CATTTAAAATGTATGAAAGTCCGGGGCTGAGCTGCTTCCttatggtccta
aacctcgtggaaacAACCAATgcatactttaagggcagaaactttcgcga
gaccGAAAAGTCGCCAAATTTTCCCGGATTTAAGTTTcgcaatttttact
ttttgaagaaaatgtttttttttgtgaattttcaattttagtagcaataa
ctttcgcgagtggctagggaaagtgaataaaacattatttcaaatctcat
tttttcttcaatcgaaagagtgatatgctaataaatgaaaaataaacatt
tgcACTTCTTCCTCCCATTCCGAATCCTAGTCAGTGCGATAATATCGATA
ATATTGACTCTCCTcggcttttaaaacttggaaagaactttcgcgatttt
taggaaaatttcatttttcgcgaaattaacttttgcaaatttcttgttta
atttcttacctggcagaagcTTTcgctaaaaacgtaaaaaacccGAAAGT
CTCTGCCTTTAAAGCGATAGTCCagagaagggggcagaactaacgaattc
tcactaaaatagcaTAAAAACGCAAACTCGCGAATTTATAATGTTTACAC
CTTCTTCTGTTCCTTCTCACAAAGCCGGTAGGGGTAGAAATAACAGACCG
AAACTCAATTGTATTGATTCAggtattcccatattttttatggctgggga
tttagattctattgttttcaagtcactAAGTTCAGTGGGGATGCTAAAAT
TAGCATAATATTCtgtagtgaggattggtttatttgattattttcagtgg
agacaaaaattgtagcataattttccactggggacgataacAGCGCACTG
TGCTTAATCtaaagataaattttatttttgacataatcattactctcgac
gtgattgtacgagttccaatcccgtcaacctttgcgttaatctcttttgc
acgttaattgcatcatttgcACGTatattgaattgtgggattgcaacaaa
aaaagtgaaaagtaataattatgacatATGCGTTTCGGAGCGCTATTAGT
AACTTTTAACAgcgctgaagcgatttagaggggctataaccggctgggat
ctGTACTTTAGTCTCACACAAGTCACCAGTggcacttttttttttaattt
ttctgatgAACATGACACTATAAAAGTGAACTAAACTAAGGGACTTGGTT
CGAGTTTGGGTCAAAGGGGCTTTTTTTAAACTGTTCAGTGGGTTCAtgtt
ttgttatattttcttccATAATTGTGGAAGTTACGTAActttacaaaatg
aaaaatctctttttctcaatttctttatgTTTCAGTATCGCAATCAGTTC
AAGAAAAGACGAAGAAAAATGGGTGGACATCAAGAACGAATTTAGGTAAG
ATAAAAAATGATCTTTCACTTATTTACATGCAAGGTAAATAATAAACAAA
TATTGAATTTTTGGTTCCATGAAGATCGAATCAGAGAAGGTCAACTGTAT
ACTTCTTCCCTCCATGCCAGTGTGTGGTATTTACTTTGtatgagtctcca
taactcaaacctCTGTAACTCGACAATCGTCTTAATTTTTCTGGTCCCTT
TATACCCTTAGGGTGAcaagtctctataactcgaacgtcTTACAGTTGAA
AGATATTTATTGTATCTTTTGGATAAATGCTTTACAATTGATATAAAATT
ATATAACATTCCCCTCGCACGCTAATTTTCAACAACTTCTTTAAATCACG
TGTTCACTTAGTTTTCTATCTTTGACTGGNTAACATTCCCCTCGCACGCT
AATTTTCAACAACTTCTTTAAATCACGTGTTCACTCAGTTTTCTATCTTT
GACTGGCTTACATAGCCTAGCAACAACTGTTTTCTTTCTTGTTGTCCGTA
CTACAACCCGTCTGTTTTGTGTTGACGTAATATCTGAATCCCTTGCGCCG
CCATCAACAACATCACTGCTGAAGTCATCAAAATCGTTTGCGTGCAAAAA
TGTTTCCCTTCGCTCCTCGATCACAGATTTCTTAGTGATAATCAATGNTC
AACAACATCACTGCTGAAGTCATCAAAATCGTTTGCGTGCAAAAATGTTT
CCCTTCGCTCCTCGATCACATATTTTTTAGTGATAATCAATGCTCGAATA
TACCGTAACTCACAATTATTGTTGCTATCAAATTCAATACTTCGCCTGTA
TACAGGAATCATTTTAATTCTCATGCTCCACGGACGTAAGCACACAAAAA
GCCCTTTTGCAGAATcccctctctctctctaattttAAATCTTGGTTAAC
CAGCTAACTTATAACGCTGAATGATAAACTGTTAAAGGAGTGTTTTTTCA
TTACAATGTTCGACTTCGAAATCCGAATGTTTTGAAAGAGGAAGTACTTG
ttttggttgaatttttttcaataataatccacatttttcagcaaaaacat
TAAACTTTTGGAAACTCTGGTCTACGaaagttttacaaaaacatACAGTA
TCTCCACTTTacagaaattgaaaaaacatACCCCCAAAGTCGAGACACAT
ACGTTCCACAAGTCAAAGAAAGTCCAAAAAAATCTATCTGGAACACTTGG
AATTATCagtaaaatcttaattgacCTTTTGAAAAGGTTTTTGAATGTCC
CAAAAATGTTTGTCTAGAGTAAAGCTAGGACGTCGAGGTTTTAAGCTTAG
CCTTATGTAAATGATTTATTCTTGAAAACATCCTCATTTTTTCCTTAATT
ATTTTGGGTGCTGGGTTAAATTATAAAAGGGTTTAGTAAATATCATTCAT
ATAAGGATTTGTTCCCATTCAAAACATAATGCACTTACCATAAGGGACTA
GATTTGAAATAACCAGAGTTGAATGACGTCAGACTGATATCTAtaagccc
caggggggggtacttaggaaaaaatgggtgctgggtatgtgcggacggta
agggtcggtttttcacccttcaaagtctctctaagggtcggtttttcatC
CTTCacagtctctttaagggtcggttttcggaggtcccgtccgcataTAC
CCCTCATCCACCAACCCTAGTACACCCCCCGCCTTTAAGTATGTTTCAAT
ATAAATCCCTTTCATGAAGCTTTTAAACAAAAAGGTTGACAAAATACCCT
CTCAACAGCAGTAAAAAAAACTTCCCCACTTATTCTACACTTATTTTTAA
CAGTTTGTGAAGATCATCCAACCAGATGCGACTTTTATTGGTCACGTGGT
TGGTACACGTGCAATGTTGGAGGTGCATTATGGGAAAATTGTCCGAAAAG
TTGTGGATTCTGTGGAGATGAGAATGCACCAGGTAAGTACGGAGCTCACA
ACccaaaaacaagacgacttgaagtcgaaaatttcgcctagaatttaaac
tacataggaaaaacaagaagtagagattgaagcttatttgaaatctactt
tacatcgagccttgatgaaacaattttattagaacaacgaggctcaaaat
cgctaaaaaaaataagaccaatttaagaacaattgttgtttaatttttaa
gaactaataaaaaaaggtaatatcaccgtctatcaaaagttattgatttg
attcttataaagtatatgcttataagaaaaacgaatatgctcatattgtg
cgcaatcccttgtttactttgtaagaactaattaccgaaaggtatattac
cgactataaagagttattgatttgattcttataaagtaaatgcttataag
aaaaataaatgtgctcatattgtgcaccatctcttgtttactctgtaaga
actaattaccgaaaggtatattaccgtctttcaagagttattgatttgat
tcctataaagtgaatgcttataagaaacatAAATGTGCTCATATTCTGTT
CCatcgcttgtttactttgtaagaactaattacctaaagtatatcaccgt
ctatgaaaagttattgatttgattcttatagagaatatgcttataagaaa
catAAATGTGCTCATATTCTGTTCCatcgcttgtttactttgtaagaact
aattaccgaaaggtatatcaccgtctatcaagaggtgtcgatttgattct
tataaagtatatgcttataagaaaaacaaatatgctcatattgtgcgcaa
tcccttgtttactttgtaagaactaattaccgaaaggtatattaccgact
ataaagagtttttgatttgattcttataaagtaaatgcttataagaaaaa
taaatgtgctcatattgtgttccatcgcttgtttactttgtaagaactag
tTACCTaaagtatatcaccgtctatgaaaagttattgatttgattcttat
agagaatatgcttataagaaacataaatgtgctcatattgtgtgccatcc
cttgtttactttgtaagaactaattaccgaaaggtatatcaccgtctatt
aaGAGGTgtcgatttgattcttataaagtatatgcttataagaaaaataa
ataagctcatattgtgcgccatcccttgtttactttgtaagaactaatta
ccgaaaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataa
agtatatgcttataagaaaaataaataagctcatattgtgcgccatccct
tgtttactttgtaagaactaattaccgaaaggtatatcaccgtctattaa
GAGGTgtcgatttgattcttataaagtatatgcttataagaaaaataaat
aagctcatattgtgcgccatcccttgtttactttgtaagaactaattacc
gaaaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataaag
tatatgcttataagaaaaataaataagctcatattgtgcgccatcccttg
tttactttgtaagaactaattaccgaaaggtatatcaccgtctattaaGA
GGTgtcgatttgattcttataaagtatatgcttataagaaaaataaataa
gctcatattgtgcgccatcccttgtttactttgtaagaactaattaccga
aaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataaagta
tatgcttataagaaaaataaataagctcatattgtgcgccatcccttgtt
tactttgtaagaactaattaccgaaaggtatatcaccgtctattaaGAGG
Tgtcgatttgattcttataaagtatatgcttataagaaaaataaataagc
tcatattgtgcgccatcccttgtttactttgtaagaactaattaccgaaa
ggtatatcaccgtctatcaagaggtgtcgatttgattcttataaagtata
tgcttataagaaaagtaaatatgctcatattgtgcgccatccttggttta
ctttgtaagaaataattaccgaaaggtatatcaccgtctatcaagagtta
tagatttgattcttataaagtatatgcttataagaaaaataaatatgctc
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cgttttctaattttttttccgatgacaccgccgcgaaaggctatcgtaat
actttcgctaggcgaaattaataaatattttggatttaaaCAGCCGATTA
AACTCAAGATGTTTTGTAAACCATCATTGCTCTTCCcggcgttgtttcaa
cgtttatctaacgtccacaacgtccatataacgttagatggacgttaaaa
caacgttgtgtgcctgctGGGTTGGCACTTTTTGGCACTTAAAAGACGCA
AAATTGTGAGATAGTTGCCTCCGAAACGCAACACTCGCGCAATTGAGTTA
ACCCAAAAAACTTGGAGCAataacttttcatttttctctctACAGATTGC
AAAGACCAACGGAAGAGCGGTTGTGACACAATGAAGAAGAGAGGTTTTTG
TAAAACATACAAGGCTTACATGAAGCAATATTGCTCAAAAACTTGTGAAA
TGTGTAAAGGTAATAATTTGTTCAACAACCCTTCCATAATGGAAGAAATA
AGTATTCAAATTCGAAAATTCTCCGTTTTTTAAACGGACGTTTGAGACAG
ggcacccctgtgtcacagacccgttaGGTCCCAGCCCCATCGGAAAATGA
AGCAAAAagtttcgtccccggtggggaaatacccttgaatttcagcccca
ctgggaaattgactttgatttcatcccactcgaaattccatgtttaaaaa
tgaCACTACAAacccactgggttttttaaccttggaacaaaagaatttct
atttccattggaatttcaattggaatttttatccccacgaggaaagaagt
tccaccggggctgtgaaacagTGGTGTGACAGAATatagcagtgccgtag
caactgatttttttcaaaaatggtcattttgcaaaatgcaaagtttttaa
ACACATCTTATGTTTGATCAAAGATTGATTTTTattggcccagctagctt
tagcgtactgggcctttcattagcattctgcctggtgtcagtgtgtaaca
atttactaggcgGTACGCGTTTTCAAGCACAGCACAGGCTAGTACATATT
GTGAAGGATTTGATTGGCACTTAGAACATGATTGacagaataaaaaacaa
ttgaaatcgtctttattggttaaaaacataaaaggagaaaatacaattaa
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NNNNNNTCTTCtctttaggaagatgttcttttaaaaaaaagttgttttta
catttctctatcatgtgaacagttcagttgttcacgtgttaggaaaaaaa
ctaacatctgtatataagattaaatattatgaattattactcattgttga
aaataagagatagccgaatggtctaaggcgtctaTAACTTGTATTAGGga
ctccaggttcaaatcccctctgctattcaagtcttgttcagttcatattc
ttattcgctgggccttcatgccctctgggcttcttgtttttttttcaaaa
gcatttcgttttgagtgtattttcaagcaatctagagatcaaattttcaa
aatttttcaggtgtcactaaacttcagcccctcCCCCTAATATGAAAATA
CTTCCTAAGGCACTGTATAGTAGGCATTCTCTAACGAATTTGTTATCCTT
ATAGATCATAGGACTAATATATAAGTAGAGGGAATTtcgtttcaattttt
tgacatcGTGCAAAATTTTCAGTCAAAGCACTTGTATACATCAATAAAGG
AGTCCAGATTTTGAGGGTAccatttttttttcggacactggcgtatttta
cagaccagaatagaaaatGTCCGGAAATCAccaaaattgcaatttttcaa
aaacttcatCAGTTTTGAAAAACATTACATGTCTGTGATTTAGATTACAT
GTGAGGTGATTCTTCGGAATGATAAAAAGAGATTAAGAACTGTTTAATCA
ATTTAGTCTCTATTTCTCTTAAAATCCCTTTTTTCCCCTCTTTTTTCAGC
TAATAAATTttgttcgccaaaattaatcctcgccaaatttcgaaatttta
tcaaatcgccaaaataaattccgtcaaattgcaccaaaattggcgaatga
gctcattcgccaaaatttctgcTCTTAAGGTATCTTGTCTTCACCTCTCT
TAGCTCAACAAAAACCAAAGATAGAGCCTGGATGCAGAGACTATGAAGAT
ATGTGTAACCGATGGGTCGAATTTGGGGAATGTAGAAAAAGTGCTGATGT
TCGAAACTATTGTCCAAAAGCTTGTGGAATGTGTGGTGATAAGATGTCTA
CAAAAATACCACCAAAGTTGGGTAAGTACAAGTTTTatcaagcagcctca
atgtttcttaagaaatcgacattttgagcctgaaatgtttcttacatgtt
tctaaactttgtcaacCTGaaaggacgcatgtcgataatacaatagtcta
atagagtaatctacggtactttcctatcttctatattgattttctgactt
tcttaAGTGTTTTTAACtgttatgtaagtatttttctggaactttgcctt
gattggaaggttcgaattaaaaatgttattttctcattctcagcctcagc
atgtttcttagatgtttcttagtttttaggcattctgagcatcatgtttc
ttaaaagtgtgtttcttaaaaaaaagtgtacacgTTTAACAttattttga
tctgaaaacAACATGATGTGTTTTACTGAGCTCTAGAAATATTCTGTGCC
CCTTATGTTGAGGgagtgtgacgtccagggtggtatAAAACATCCAGGAT
GTCAGTAAAATGAAGTTGAAAATCCAAGAGTTGTTAGtaaaatgaggttg
aaaatccaAGGGTTGTTAGtaaaatgaggttgaaaatccaagtggttcct
gaaaaattgaaaaacaaatccAGGGGTGGTCATCTTTTCTTAAAAAGTCC
TCCTACATAAGGGGtacaaatttattttggaatagcccaatgagaaaaat
tgattttggtgaatttatttcaaaagttcAATTTATACAGAGACGAGATC
AAACTTTTTACCTAAAGTAGTCTTTCTGGTCTAAGATTTGctgagttgtt
tttttttttgcccaaCTTTGATATTTTGGTGCTATGCACAACAATATTTC
CAGTATTTCCCAAAAAATAGAAAGAGAAAGAATCcgtttagagatttttt
tgatgaaaaggGGAGTTACTTATGAACAGGAGATGCCCTTTCCTCGGGCT
Cgttatttttgaatatttccccgctataaggggaaatattagttaaaaag
gcatttctccgatccttggctacttacgccctttttgcgcccttaANNNN
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NNNNNNNNNNNNNNNNNNNACTTGAAAATTATAAgcattaaataataaat
aattcgaaagttactgaagtacggcgcatttttaaggcttcactttttct
tgcctgagaaaggttagagattgaaactcaatgagtccatctgcaagtgt
aagggggaaatatttagtcgcatttgtgCGAATCTTGTTTCTGTTTAGAA
GATCTTTGCNGGGGAATTACTAATGAACAGGAGATGCCCTTCCTCGGGAT
CGttattttttctgttaagaagatCTTTGCCCGATTTTTATGACCCAAAC
ATCTGCTCACACCCTGTTTCCTGATCTGACTTTTTTCAACTCATTATTCC
TAGGGCTGCTTATTATAATAGTAAACATTTAATATTCATTCATTCTAGAA
CCAAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAATACCT
GTGTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACCTGTA
AAATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTGTTAT
TGGTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACAATCA
CGTGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAATTAA
AACATGCCAAGATGAAATCAAGGATAATTATCATAATCTCCGGAagattt
tttgagaatttattcAAACATCCAATTTTATCTAAGATTTATTCTTTATC
ACATGATTTTAAAgtgtaaaatttttttcagattttaaaattatgaatat
ATCCAATAGACTTTTTAAAGTTAAATTTATTTGCAGAAGTATTTTTATCC
CATCATTGAAAAATCATTCCGACGAGAGAAAAGACGAAATCGAAAATTTG
CTAAAAAATCTAATATATATCTATCCCCCCTGAGATTTTTCACTAACA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059826	TCONS_00059826	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059826-protein	TCONS_00059826-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_331	supercontig	scaffold_331:691487..706734 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.11	0.17	0	1.53	0.81	1.36	1.32	0.93	1.07	1	1.01	65.3	79.4	0.09	0.12	0.26	0.09	142.48	193.41	0.18	0.11	0.09	0	2.28	3.56	0.47	0.11	0	0.04

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XLOC_037629 (gene) - C. hemisphaerica