XLOC_037875 (gene) - C. hemisphaerica

Overview
NameXLOC_037875
Unique NameXLOC_037875
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_337:71955..82311+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037875 ID=XLOC_037875|Name=XLOC_037875|organism=Clytia hemisphaerica|type=gene|length=10357bp|location=Sequence derived from alignment at scaffold_337:71955..82311+ (Clytia hemisphaerica)
AGAGTAGTGTGTTGGAATTAAACTGATGATTTCTCAGGAAGATTTCTCAG
GAAGATTTCTCAGGAGGACCTAGCTCGGAGTCTAACAGGAACATTATGCA
AGCAAACATGGCCATTTATCCAGACGTAACTAATCGAACGAAATTATTCA
ATAAGAAGAAGGTAAAATAACACAATCATTCACATTGTCAATCATTATAC
TCATAACTAAATATAAATTATGGACTCATGTCTGATTGCTGATGATTATC
TAGTATAAAAATATAGGAATAAAAATATAGGAacaattatttttgtttgt
aaGACTTTCTTGACTTGACCACAGCTTCCGTTCACTCCGACCATGATTAT
AATAATCGCGTCACACAGCGTgatgttttgacatttttaaccaatgcaat
gaaatcatttgtttatgCCTCACActataaattaaattaaaggTCTTTCA
AGATTACAACACAAAATAAAATGGGGGTaacatgaactttaaagcccGCT
GCAGGGAAGGGAAATGGTTTTGAACCAAATATATACAATCATAagccagg
ggatgtcaatcgaactaaAGGCTACTaaaggcgctgtggtatagagtggt
cattgaccttggttactgcacaggcgactgaggttcgattacgattccca
ctcgcagcggttcacttggcaagtgaatgaaccttcgcccgggtcaaccc
ataccatgtgaggagaattgggtagtcagtccaaggtgctgacggggcac
tcattgaaagcgtctatagttgcgaaaataggcctcaaagcctcctgcaa
ctcaaccaaatagaaaaaaaatagaaaaaattcgattgtcaaatcGATCG
AACTCAAGCGAATTCAATCGAACTGATCGATCCAACTGATCGATCGAACT
CAATATCGAACTGATCGATCGGACAACAAACTCAAtcgaatatttacatt
tttttacagTTGATTGGGTTCAATTGATTCGATCAATcagttcgattgag
ttcgattgactcgaaaatcaaatttttcaattggACTTCGATCACAAAAT
ATATTGTAtatactctttttaaccaaatcagattgcagatatttttcgGA
ACGCCGATAAATGCCACAATTATCAGGTCCAGGTATCTTCAGAACACTCT
GTCAgcgtagacctaaagctctaaaacagcatctaataacatggaaacca
gaatatgattcttcaatctcaatgggaatcaaaactataaagtgcactta
caaacatcaatttgtcagatctaacaaaattaataactgtactgtcatca
ttgacaataaaacaaacgattttctgtcaagagccttgtaaacattccaa
caacttccatcgaaatgatatatcacagctcagtctaccatttttagcgc
ggtccgaggattgagcagagctcccgcgcggcgcgcaccgcggggatgag
aaacttcaatctgtcaatcattttctcaagcgaagagtacgcgaagcgat
tctagctttacgatagtgccgcggatcatcaatggatagtattcaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggcgggacttt
ggcttaagtgcttgagtgcagcatagggtacaaagtccaaacatgcgttt
cccgtaatttttgtgtgaagagttaggtctacactgtctgTAACAAtgac
agtatagacttaaactcgtatattACGATTACGGGATTTTGagtacgggc
cgattttactttcgttttgagtggtttcattttcgatttcaagccaacat
cttagcaacggggtgctcgcccatagttacaggggtttgtgcaaaaacct
taacatataaaattttctaaatccCACATTTcaattaatgcaatgaaaaa
tgaaacttttctatgtttcacttttttgcacctattcttcaaaatgaaaa
tatttaagattttaagttcttcttttattcaatgattctttactgcactt
tgttgacaatctaactctcgcatcaaattcccttTATTAAATTGAAAACC
ACGGATCACGgtttgaaacaaatatatgaagaatgggattttacagccgc
ccatcgtgcaaggcactgaaaggccacggCTGCTAAAAAAAGGGCCattt
gaaatgcggcaacctcattggtggaaattcgataaacagctgcaaaggag
cgctgggaagcaatcagtagaagagaccactttcgtttttgttgcagatt
tctataaaaacttctctcagggattacttgtcaatgtacatgtacacatg
tgttgtgtcaacctGTCAGCatattgtatttttgtaaaggaaaagataaa
agaggaaagactagcctagtttctagtCCTGATcatggctccgaatgggg
tactaggtccccccaacaaatttaggtcccccctaagttTTAGGTGTTCC
TGGGTGTGTTTTTCCTAGATATAATAGCTTTAGTGTTCCAGTCCTTCATA
CTAGCCAAGTAGTCTGTACAATCAGCAATATATACCATGTAAATAGACAG
TCAATTTAGCTTCTGAACAATCCTTTATTGGTATACTTATACAGTTATCT
TTCGCATTTGGATGTGCTTCTTTGTTACAGTACAGGTCTTCAAAAGCATT
TATTAAAGGGATTCTGAGCAGCGACAGATCTGAGGGGTGACAGGACAATT
GCCCCCAGGACAATTACCCCCATGCCCCTAgacaatttcattatttttca
tcccCCTTTCAAGTGCCTCATTTTCATATAATAATCATTTGAATCCAAAA
AGATGATACAATCTTTCTTCTTTACTTTGATGAGTAGCGGTTGACGAGAT
ATTTTCAGCCAACTTCAATACACTGTTCTTCCTCAATCCCAAGATGAGAG
CAGATGAAAGAAGTATCAACAACAGCTCTCTTCTTTTTACTGAAAACgca
ttttcctctttttgatgGTGGATCTTTTATCATAGGGCCTCATATAGATC
GAACATTATGTGGATCGATTTTATGATGCAGCTAGGTGATGCCTACAATC
GTATTGACAATACTATACAAAAGCGGAGACAAGCAACAATTATACATTTG
TATAATCACTAGTTTAAAACAATGACTCCGTTTCGTTGGAATACTGGTTC
AAGTTCTCTAATTTGTAAGTCACAAGGCTGCCTTCCCAATCGACTCCCTC
ATTAAAGGCTCTTTGACTTGATAAATATCTGTATAAGAAAATATATCCGT
GTTATTGTCAACTGACAATGGTTGTTATGAAAGATGCAGTTGAACAAAAT
GGCAACCATTGATTCCGGATTTCAGATACATAGATTGGATTATAATAATC
AAAATTGGAGTGAGCAACAACAAAACATTTTGCGAGGAGTTTAATTAGTC
ATTTTCATGACGGGAAAAGGTGGGGTAGGCCAGTATTTAGACAATGAAAT
GAGGTAAATTATCGAAATGATCCAACGGAGGTATATTCGCTTGATAGCCA
ATGATAAAGTTATGAAGTCAGCACAGATACTCTCAGAAAGCCTTTGATCC
TGGGAACCCTTGAATGTAGGAGATCAAATTAAAATCCATCCAAAGAAAGT
TGTTGTAATGTAAATTTCAACCAATTCAAGGGAGAATCAAATTCTGCATC
GTTTTTTCCCTCTACGTTACAATATTGgcatatatatattttttgacaCA
CTAGAgactttttaacaaaaaaaaacaaatagcaaaaaatataatacaTG
TCGATTGTTGAATGAGGTGGGGTTGGGCTGGTAAGAGATTTCtggtgggg
gtaaccctatNGAGTGAGCAACAAAACATTTTGCGAGGAGTTTAATTAGT
CATTTTCATGACGGGAAAAGGTGGGGTAGGGCGCTGAAGTGTACTGTATA
CTTACTGGAAATACTTGGAAATGTTGATTTTGTGTTTTATTGAGTTAAAT
CCAGCATTGTTTGTACTCTAGATAAGGTAGAACAAGTGTCTTCAAAGAGC
GAGTGTTGGTGTAGTTGCTCTTGTTCTGGAGGTCCTGAGAATCTGGAATG
AGGTTTTCTGGACATTTGAAAACAACATTGCTTATGTGGTGCTTGAATTT
ACAGGCTTTGACCAGGTCCCTGCTGAGACATATAATCATACTCTTAAATT
ACAGTGTTTCTCTTAATCATGTTGCTTGTCTCTGCTTTGACTTAAGTATT
TGGTCTGTAAAGTAAAACTCAAACTTGACACTATTGAACTCCATGTTGTT
ATCATCCGCCCAGTGATAAactgtattttaaaattttaggtctCCTTGAG
GTTTTTGAGTATACTCAATGTTATCTACACCTTTAATGAGTCTTgtgtca
tctgcaaaatttcatcatgaatgTCTCCTACTAAGATAAGGAGGGGGTAG
ATGGAATGCTATCCATTATTAAGTTTTGGTGATGATTTGTTAAGAATGAT
TGtaataatttgaaaatcttttcacCCATATCAAGATTTTGAACTTTGAC
AAGTGCCAGGTTTATGTCTACTTTATAAAATACCTTGGAAAAGTCAAGGT
AGACAACATTTGTATTTCTGTCTTGTTACAATAAGGACAGACAAGTAAGA
TCTTCTGGAGTGAAAGCTATGCTGGTTTGAATTGAAGATAGCATTCTCCT
CAATGAATTTTGTCAATAATTCTTGTACTGCAGGATctcttttcaaagat
tttcacaAAGTAGGGCAAACCAGGTTGAATTCGATTTCCTCCGTTGTGGA
TATATATAGGCATAATTAGGGATTTTTTCAGTATTTAGACAATGAAATAA
GGTAAATTATCGAAATGATCCAACGGAGGTATATTCGCTTGATCAGGCTT
GATAGCCAATGATAAAGTTATGAAGTCAGCACAGATACTCTCAGAAAGCC
TTTGATCCTGGAAACCCTTGAATGTAGGAGATACAAATTAAAATCCATCC
AAAGAAAGTTGTTGTAATGTAAAATTTCAACCAATTCAAGGGAGAATCAA
ATTCTGCATCGTTTTTTCCCTCTACGTTATAATATTggcatatatatttt
tttgacacACTAGAgactttttaacaaaaaaaaaacaaatagcaaaaaat
ataatacaTGTCGATTGTTGAATTAGGTGGGGTTGGGCTGGTAAGAGATT
TCCagtgggggtaaccctatgtaggtggggtTGACCTTTTTCAAGTGGGG
GTTGGATGCTGCCCACTATGACTGTCAATAAACTGCCATCAAATTGCAAA
CCTTACTgatgaaattgaatttaaaaaagcaATAGATAATAATGCAAACA
TTCCCAGCAGGGATTTAAAGAACTTGAAGATTAAAAAGGGcgaacttatt
tttttttcagttgacaCCCATCTTAAAGTACTAAATTACTATTTNAATTA
TGATAGTTTCTGTTTTAAACGTAATGTAACTATAAAAATAACTGTTTATA
ATAGAAACTGTCTTACATGGGATTTACTTTGACGTCAAAAGTTTTGCAGC
TTGAAATTCCTGCGATTTTAAGGAATTTGCTTCGATTCGCGAAACTAACT
GGTCACGAAAAAAGTAAATATTGCTGACTCGCGAAAGTCTTTAGATCACT
AAAGCTTGGTGTCTATCGGAAAAATAAGATCGTCGCGAATTTGTTTGTCG
CcaaaaataaatccagacatATATCGTCGCTGTAAAATAAGAGTGCCTTA
TGTCCATTTTTGACATCTTGAGGAAATAGCAGTTCAAGTATTCTCATGTT
TGTAGTATTTGACATGAGGCACTCTTATTTCCACCCTTATATCGTCGCTG
TAAAATAAGAGTGCCTTATGTCCAATACTACCAATATAAGAGAACTTAAA
GCGAcgataaacttttttttataagcattgcacttataagcatatctagg
ctcagataaggggaaaaattaagcatatagcaagcattacttgagcctac
gaaaaatgtttttttcctgatttcggctttttttggctggaattttacgg
atttttagtatttccctaaatttatgctttagatttaagcattccctcaa
gcatttttcagccttattaagctttcgacctaagcatctctgagcctgtt
ttcggatttttgtatgattataaaaaaaaacatgtacgtcTGAAATTAAA
aacctattgttttatttgcgATAGGGCGAAAAAAATAagcgatgaaaaat
gaaaaacgttTTCATTCCATATATCGTTTATTATTTCTAATTTGCCGTAA
AAGACAACAATAGATTTTTAATTCCATACATATGTCTGGATTTATCTTTT
GTTAACAGGTATTTGCGAcgaacttatttttttttcagttgacaCCCATC
TTAAAGTACTAAATTACTATTTGATTGCATGTATAGAACATGTGgtgata
atattttgaaaaaataaaaaaaagagcaaaaacaAATACTTTCACTTTcc
actttataagaaaaaccaggcaaaaactttttcttcatGATTCGAAAATG
ACACACAACGCGAAATATTTCATTAAGTCAAATGCGCGAAATAAAATTCT
CGCGAAATAACAAAGATTTTCTGAccgcgaaaatttttgacattaaagTA
GATTCAAAAATAACTGTTTTACAATGAATGTAGCTATAAAAATAACTGTT
TTACAAGGATACAAGGAATGTAGCTATAAAAATAATTGTTTTACAAGGAA
TGTAGCTATAAAAATAACTTTATCTGGTGCAGGCGATTGCAACAGCAATT
CTTTTTGCAAACGAGTCTTTTCGAGCCAGATTCCATTGGTAAATGAAAAA
TTGGACATAAAAGGTGAAATGCTCCTGTGTCATCAGTTTCCCTGATGTCT
TGATGCACTGCAGAAAACTGTTAAACTGCTCGCAAATGGATGTGTTCAAG
CCGTTGAATCCAAGCAATCTGTTTGACTTGAACACATCAGAACATTTATG
TCCATATCCATGGAAGATATCGTGGAAAAAGCGGGTGTCTTGGAAGAAAC
CACTTTCCCTGTTCCTACCATACTCCTCCAATGAACAAGcaaagtcataa
aaaatttcatatgGTGCCTTTTTCAAGAAAGCGTATAGAGGCGCTGCAGC
ATCCTTTCGGCCTTCTGCGTGGGGAATTATATGATATCCGTAACAGTGCC
CGTGTGCTGGGCAAAACCACAAAAACAAATAGGATCTGCCTTTGGCAgtt
ggaaaaatctttgaacaaaCGTCTTTGTCAGGAAGATCGTCAAAGTTGTC
CAACCTTTTGTTGTCTTTGTCGGCGCTAAACTTTCTCGTTTCCCGAATCT
GGTCCCCATCATGAAAATAGTACGCTCTCCCGTCTCTTGGAGGATTATAT
TTCTTGACTAATCTTGGATCTTCAGGGGGAACCTCATCATCCATTATCTC
TTTTCTTAGAAGAAAAAGATATCTAAGAAATTCAACTCCGTATGTTTTAG
GTGCAGATCCTTTGGAGAGAGATGTTACGATGAACAGCCAATCACCGAGC
TCAGGAAAGAAGAACTTTGAAGACCGATGGAATTCTTCTACAACTCGCCA
CAGATCACTGTTCTCTTCGATTGCATTCACCGACGCCAATAAAGTGTTCA
AAGTTTCAAATTGAGGTAGGTATCTTTTTGGAATTAGATTAATTAAACTT
GTATCTTTGGTTAATATCACTATTAATTTACTCAATGATGTTCTTTCGAG
AGTTGAGATATCACACTCAAAGAGTTTTTCTGTCACTAAACGCACCACAG
GGATTTCTGATCTCATCAGTGTTTTTTTCGCTACTTCTAAATCTTCTTTA
CTGGCCTTGACTTTGCCACAAAAATGTcttgaaattaaatttagagCCTC
GTTGACGACTATTCTTGATTTACTGTTGCGGTTGTTAATGAAGGTTCGGT
CATATCTCCTTCTTTTTGTAGGAAAAGAATCTCCGACAGGCTGCTCAATT
GGCGTCACATTAATCTGCTTAAATGTAATTCCGATCTTTGTGGCATCGGC
GGCCAGGTACTTTGGATCTGATCCACAACTCGGACATTTTTTAACAAAGT
CCAGATCCATTGCTGAAGCCCAGCTGAACCACCACTTGATCAGAGTGTTC
CTGGACATAAATTCACATGGAGACTGGTAGTCTGTGTACCTATTTTTGAC
AACCTTGACAAACCCtgaaaatgtttgtttgctGGTCATTACGCTGTCCA
CGAACTCCCAGCCTATTTCGTACCCGCAGGCAACTGTTGTGCTAGATCGA
AACAAACTGTCTTCAGACCCGTCATAGTCCCGAAAGCAGCTGCCACCCAT
ACACGCTCGCTCGTAAAGTCGACCTTTGGCTGCACCCATGGTAGAGTAAA
CGATAGTTTCCCCGCGAGGCATTATATGACCGTCTGGATTCTCTTCGTTG
TACCATCCACCCTAAATAAACAAGATAAAACTTGTTATGAAATGTTAGAA
TGACTTTCATGGAAGTGGATATGATATGACTGCGCTTATAAAAAATGGTA
TCACGCAATAGGCTGTCGACACAACAATTGGTTCTTTTgcattaaaataa
aatcaaatcagTTAACTTTTAATCCACAAGATTTTCATAGATTTTATAAC
TAACTTTGATTTGATTACATTGACATTGGAAAAACGTAAATTAAGCTTAC
CTCACATCCACAATTACCATTCTTTGATGGAATGAGTTTGATTTCCTGAC
CAAGTAAAATTTGTATTGCCCGCCTTTTGATGTTTTCTTGATAAATTTCG
TCCCTCTTATCGCTGACGCGCCAAACGCTTGGAGCTTTCTCATGGAATTT
CCATCGACCAGTATCTTCGTCGAACACCTTTTCCCACTAAAATGAGATGG
AATAACGNCGGAAGGAATGactaatttaggtgaaaacttGACAGCTAGAT
TTCTTTCCTAAGGAGtgcgttttcaaatagttttcacCACTGATGAATCT
ATGAAAGTAGCTGATTTCGaatacataatttttatttttactgatGAGAC
CGATGTGCCCTAAATTTCcatttgaaaataatcaaattatgttCTGATCA
AGAATGTGAAAATATGTAATTAATATACGatagcaacaaagaaattaTTA
TTACACGCGTATAATAGAATTCCCATTGCAGCTAAGGGACCCCTTATAGA
CACgcttcattttgaggaaaaaagcttGTATTTATTCTATCTGATGATAG
TTCTATGGTTACACTATGATAGTGTGTGGATTAGACACCCAGATTTGGTT
ATTTTGTTATTAATATCaatattgtgtttttttttatcatattcAGCCCT
TTATTTGACCTTAGTGTATTTTGTAATtaagatttaaagtttgtaAAGCG
AGCAGTACCTCAATAGGTTCAGCGTCGGATACAAAATCATCACATTCCAt
gtcgttgtcgttgttgttttcattttcattttcattttcatcttcgtccT
GCACACCTTCTGTGAACCTCAGGGTGGTCACATCAAAAGAACTCCTTAGA
AACTCAAGGTGTGGGCAAAGGTTATCAGATTTTTGGAACGTATCCAAGTA
CCGctccttggaaatttttgaacgGCAATAGGAGTTGTGACACGTTATTG
TGTTGTGTCCCTTTTTATTCCTGCAAATCGTAATCAGTTCCGCCTCATTG
TTTTCGATTACTACAGCGAACCTGAAAACGTTTATTTTTCCAGGTAGCTG
TAGGATTGGCATATTAACGGATTCCTCTGCCTTGGAAATTGAATCTGCAT
TAAAATAATGTCTCCCTATTGAAGTTTCCTCAAGTTCATTCGGCACGAAA
TTCATGGGTTTGAGGACGAGTAAATCTTCTGCGAGCCGAGAATGACAGCA
TTTCAAGCCTCGAAAACCCACTGAACCGTTTACATCTTCTTCGTTTACTG
TGGACTGCAGGAGGTCGAACACTGCGCAGGAGCAAGTGATGATTGGACCT
GTCGTCGTTCCTTTGATTGTCACGTGCACAAAATCTTTATCCTAAAGTAA
AAAAGATTAGAAATAAAAGACAACTCTTCCCTGCATGGTCTAATGGTATC
GGATTCCCATAGAGTAGTTAAGCCCAAGAAATAAAAACGAAATACACAAA
AATCCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060202TCONS_00060202Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_337supercontigscaffold_337:71955..82311 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5	0.87	0.07	0.16	9.07	8.48	7.51	10.23	5.21	7.32	7.76	5.59	6.23	5.54	3.74	5.34	3.7	4.87	5.22	5.66	4.7	5.14	2.25	2.77	0.04	2.1	10.11	6.07	5.81	4.48