XLOC_037950 (gene) - C. hemisphaerica

Overview
NameXLOC_037950
Unique NameXLOC_037950
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_340:41841..47724-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037950 ID=XLOC_037950|Name=XLOC_037950|organism=Clytia hemisphaerica|type=gene|length=5884bp|location=Sequence derived from alignment at scaffold_340:41841..47724- (Clytia hemisphaerica)
CAAAATCTAGCTAAAAGCATAACACGCACTGCACACGGAGCTTTTTAATA GAGTGCTCATTTCAATAGGAAAACAATGGTTGTTCTCTTGGGAGAAGTGC CTTCTAGAGGTAGTTGGTTATCTATTATTTTTACATCGTTGCTTTCACAG AATTCAACTGCTGTTAACACAAGTTTCCAGAGCCCTGAGGTGAAGCAACT CATGTAAGTCCCTTTTTGTTTTATTTTCATTTTTCGTGAAGTTTATTTTA GCTTTGTTACCTTGAACTTGACAGTAAAGGGCTTAAATTTTAAATTTTTC TCAGATATACAGTTTTTTACGCGATTACAATAATAGCTGTATGTGACTGA AGTAAATTTCGCAATTATTATTTCAAAACTAATTGACAGCTCTAAAATAC TAAAATTGTATTGTAATTGTATTGTAGGATAAAGAAACGCTTGGGTAGTT TTTCATTCTATTACATTAATTTCTTCCATCATTCCAGGACATTTAACGAC CCAAGCCAACGTGCAATAATCGAGGTTCCAGGTGATGGCCACTGTCTTCT CTATACATGGGAAATTTGCTTGCGCTTCACTGAAGATACTGAAACGATTA AACTTATTACTTACACTTATTTTGAACTAAAAGGCTTGCTTTTGAAGCAA TTCAAATCAAATGAGGAGTTGTACAAACAGTTTTTATGTTATGACGAAGT AAACGTCGACCTTGAAGAAGAGATAAGGAAGTATCTTTATGAAAAAATGT TTGCTAAGTAGCGGACGAGCTGCTATTTGATGCCTTGACGAATGCAACAA AAGTCAAGGTCTATATGTGGGAAAGAGAAGCTGATGGATCGTTTTCTAAC ACTGGTGAATACCAGTAAACAAATTATTCAATTCGATTATTCACGTTCAC AAATGAAGCAACCAGTTATGAAAACAGTAGACTGTAAATATACAACTTAG ATTCCCAGGCTAGGGATACGTTAAAATGTATTCGTTTTTTCTTGAACAGC TATTTCGTTATCTTCAATTTTCATTAAGTTTTGGGAATGTTACTACTCTT CACTAATATTTTAATCAACTTATTTAGAAATGGCGAATGTTTTATCGTCG ACTCATGGTATGTCATTACAGCAGACTCGACGAATGTCAGCAATGAGTAA GATTATTGATTATCATTATTTTCATTCATAGAATTTTATTTCACAGGTCT ATTTCACTTGACCTCTACAAAATAATTATGAAATTNAAATTTTATTTCAC ATGTCTATTTCACTTGACCTCAACAAAATAATTATGAATTTTTTAATGAG CCATTCCCAATTTCACAGTACTAGAGCGCTGATACTAACAAATGCATGCA TGGCTTAATCTTTGAGATAGGTATATGACTATACTGGCAGGATCAACCAG TAAAACGGTCCGAAATTCAATATTCATTATAAACACTTTAATTTCTCTAC TTTAGGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAA AAAGTCAACTTACTCATTCCGTATTTTGATTTCGTTAGAATTTATTTATT TGGGTAATTAAAGTGCCTCAAAAAGTATATGTAATACTTTAATCCCTGAA TATATTTAAATGGTCTTGGGTCTACTTTTTTAAGTAAATATAATGCTCCT TCAATCTTGCAAGTTCAATAATCAGGAACTTTCCTACTGATGGTCAGTCC TACGTGGCCAAATTGATTTGTTGTTTTACAGATCAAGAAAAGCCAAAATG AGAAAGCAAATGATAAAACAAACATGAAAAAATAAATTCCTCAAGAACTA GAGTCGGGAGGAAAATAATCAAGGCCAAGCGATTCGTTATCATGACTCAG CAACGGGAGCCGTAAAACAACTAATCAAATTGGTCTTGCCTGTAAAGTGT AGCTTTTCATTCAATCAACTGTCACATGAATATTTTTATTTTTCCATTTC ATTAAGAATCATGATTCAGACCTGTTTGGAACTACACTGGATAGTATAGA TGACGAATCACTGCTGGGACACGTTGGAGGTATGTGTGCAATTTGAATAG ACCGAATTGATATATTTCTGAATAGAAAGTGTAAATGTAAAATCATCTTT TTCGTGTATTGTAACTGATTCAGTATGTCTGTTAGAAATCTCTCCGGTGG AAGTAGGTCTGTAAGTTGTACTGTAATGTCACAGAAACGTTCAATAAAAG CAATCCCTTCAAAATGTTTCTCTTAAAAGTCGTTAATAATATTGCCTATA TCAAATTTGACTTATTATATTTTCTCTTCGGATCTTTGTTTAGAAATTGA TGATGTTTTGGCTGTATTCGAGGTAAAATTGTGCTTTAATTTATTTACTC CGTATATTAATTTGTTGAACGCTCGGATTGTTTCAAATTTTTCTTAGGTC CAGCCTTAGTTATGTTCCTGTGAAAATGTTCAATAATAACAAGAACGTTC TTTTTTACTTTTTAGACTTCTGCTTTGCGTCCTGATGTTATTGATTTGTA AGATATTTTACATATTTATTATCTAAAGATTATCTGACATTCAAACATCC AACACCCTGTCGTTCCATGAAATTCAGCCGCTAACTGACCAGCGCAACTG TGCACATTGTATAGATCACTCTTCCTACTTGAACCCCATTGAAAATGTCG AAGAATCCACCCATACTCTACTAAAAGTAATATCAGAGAAAAAATAGTGA GAATCAAGAATATTTTCGTCAACCACTTATTCTGTTGTACAGAATATTTT TTTCGAATACTAGATGCTCCACACCCACTACAGTACAGACTCTTCTTTCT CAATTGGAATTTCTCATATTTTGACAAACCTGATGTTTTATAGGAGAGAC GAGGCAAGCTGTGAAGATGACGACGACATTGACAAATCAAACCCCGAGAC AATTAGTATTACTCGACAGAAATGTACTGGTAAGAATAAATAGGGTAAAA GGGTGACAAAAACCAGTTTGCTGAATCCGATTCTCCTAATTTTTATGATG GCGATGACTTCATCGACGGGTTTGGTCGCTACCTAGCGTAGATTCCTGCG CTGTGATTGGCTTAGAAATTTCGTGAAATGTTGTAATGACTTTCGGGAAT TCTCCATATCAAGTCAAAAGACAAAGAATGTTTCAGAAATAAAAACGCAA ACACTTTTTCAACAAAAAAGGTTAAGTTTATATTTGTGTCAATTAATAGC GTGACGAGACACGACTGCACACCCCACAGGTGTAATCTGGCTCGAAAGAG CCATCACAAAAATAATTTTGATTTCTAGTAACTCATTCAACAAAATGCTT CATTAACCTTTCACCGGAAGATAGTAAGTGCGATATTTGATTCAGGTAAA AGGGGGTGATGATGCTTAGGATCCTACTCTTAGAATCATACTCTATACTC AGGGAAATAATATTATATATGAAAGCGTTGCCGCGCTAAAGGCAAATGGC ACGATATTTCTTAAAACAGGTTTTGTCGGTAGGACTGGGTTATTTTTCCC TGAATCCTAAAACAATGGAAACACTTAAAAAGGTTTTACATTAAAATGAT AGTATATAAGCTAGTTGAAAGGAATTTTAATTTGATTGATTCACAAAATT TGAAAGAATAGACAAAATTAAACGATTACCACATCGATAAGGATTAAAAC TTAGATTTCCAACTGTAAACGAGAAACCTGGAAATGAAAACCCGTTTGCT CAGGTTTGCATCCAAATAGTCTGCACTTTAATATAATCCCAGACACTTCC AGGCAGTGTGTTCAGAAAACAAGTGTGATAGACTCTCTACTTTTCGCTGA TAAACAGTATTACATCTTAGCTGAGAGTTCAGAGTTCAGCAGGAATATTT TATCTGGGAATCTCTGTATTTTGATCGTAATTCGATTGCAATTCTTGAAA AATTACGTGGATCATAAGGGTTGATTCCATTGATAGCAAACGGGGATAGC AATTACAGTAAATATTAATAGACCGATTCCTAGTGACGTCAATTTCGTCA ACGATTAGCCATTCTTCTGAAAAATAGTATGAAGAATATAGGGTGATTAC ACCTTTCTCTACAAAGGTTGTAAATTATTCCTATTTGGACCTGCGCTTAG TAGTTTGTTTGTTTTTGTTTAGTCTTCGTTTTATTCGCTTAGAACAGATC ATCGATTTATTATAGAGAACTATAATAAATCAATGAACAGATTAAAGCAC ACTTAAAGCGAATGGTCTTTGTGTCTATGTGGTGTCGCTAATTTAGATAA TTGGTAATTTTTCAGTTCGTTTCACTATTTAGCCTTCGAACGAGTTGTTA ATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATCGAGGTC AAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCAT CATACATGGCTTCATTTTGCATTTACTGAGCATCCATGTAAGTTTTTTTA TCTTAAGTCTGTTCTTAAAATTATATTGAAATGATTTTGACGCCTTGCTC TGAGAAGAGACAAGATTTCAGGGCACTCTACGTGTCCACCAAAGCAAAGG TCATTACATCTGACGGAGACACTGATATTTTTGACATTCATGCTGGAGTT CTACAAGGTGACACCTTAGCTCCCTTTCTTTTTATCATTGTTTTAGATTA TGTTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTGGGCACTGCAATGGCTGATCGAGAGCTGTGGAGGGATGGTTATTGT TTGTTTCCGACCTAGGTCCATTCGGACCTAGGTCGAAGGATGATGATGAT GATGATGACAAGATTTATCAAAAAGGAATACCTCACCGAAAAAATAATTT CGAGCGCATCATTTTAAAGGCTTACAATCTTTAGCCTACTTAGCGGCTAA CTTAGAGAAGTTTTTGAAGTTTCAGAAAAGCATAAATCAAGGATATTTAG TCCAGTAAATAAAATCTTCATTTTTTTCTTCTTCACTTTTCATCTTCATT TACGAAGTTTTTAAACGAATTTTAAGCCTTAAAATAATGCACTCAAGGAG ATAATCAAATAATGCTTAATTTAATGTTGTCAGTACCACCATAAGCTCCA AATTCATGATCCAGTATACATGAAACCTTTCATATACAAAGGGCGAAAGT AATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTCGACTTT TCCATCCACTAATAAATTGCCTGATGGCGTCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060322TCONS_00060322Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060322-proteinTCONS_00060322-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:41841..47724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.23 0.04 0.21 0.95 1 1.04 1.53 0.99 0.78 1.44 1 1.44 1.3 0.18 0.34 0.4 0.49 0.23 0.38 0.42 0.32 0.3 0.28 8.24 12.99 0.17 0.13 0.09 0.13