XLOC_038142 (gene) - C. hemisphaerica

Overview
NameXLOC_038142
Unique NameXLOC_038142
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_348:436649..440016+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038142 ID=XLOC_038142|Name=XLOC_038142|organism=Clytia hemisphaerica|type=gene|length=3368bp|location=Sequence derived from alignment at scaffold_348:436649..440016+ (Clytia hemisphaerica)
CCAAGTACTGAGACCATTGCTACCAGAGACTCTAACATGACCAAACCGAA
CACCAAACCATCAACTTTATCTTATCCAAGTAATAATAAGAAGACGACCA
AACCNCGAACACCAAACCATCAACTTTATCGTATCCAAGTAATAATAAGA
AGACGACTAAACAACGTAAACGAGTTGCCTTCAATGAGGAGGTCCAGATG
ACATCCTCAATTCCATCTCTAACATCTCTTGATAAAAATGCAGAAGATTA
TGTCAAAACTTTAGAGGAAATAATCACTAAACATAACGAAACCATTCGAT
GTTTAAGATCGGATAAATCGTCTCTACGTAAAGTAAGTTCTGCTTTCATT
TCACGGTAAAGTAGTTTTGGAGGTGGTTGAATCATAGTCcatacaaaaaa
actttccattgtttcttacttgaacttgcgttggaGAAATTATTTTGCTT
TGCTCGCtatttgatcatgtgattaaatcttaaactaATCCCACGAGgaa
tacttggtaacgtgatcaaaaactgagcaatcgatttttatcttttgaag
gaaaaagctaaaaaaaaaaggttaaaacaataaataagcttccagaccag
agtTGTTTATACGAACTATGGTTGGATATATTagaaaaaagaaagttaaa
cTTGTTGTCAGCAGTTGTCTTTAGGTTAGGCACTTTTTAAAAGCTATCAT
AGGTCTCCCATAATCATAAAATCGAAAAGTATTTTTTGTCATACTGATTT
TCTCAATGAACTATATACTATTCAAataaccccttctcacagacccggta
gatttttttcagccagtagggGTCAAAATAACTGACTGAAAATCGATGGG
GATTGGTATTCCCATATTTCTTATGGCcgggaattttaatttttttgttt
tcaagtcagaaaattcaatggggatggaaaaatagcCGTAACATTTTGCA
GCGAGGTTTGGTTTATTTAATTATTATCAGTGTGCACAAAAAtgggagga
taattttccactggggatgatattttggctaatttttccagtgggaaggg
ttcccagtgggtttgTGAGCGAAGGGGGTATATTCAAATTTTCCGTAATC
AATATCatgaaaaacactttttatttcttttcctaGGACCTAACACATAC
AAAGTATTCCAGAAAATCATTCATCAAACGTTTCACAATCACTACATTAA
AAAATGCTTTCCTTAAATCGAAAGTCAAGGATCTTGACGATCAAGTTTTT
GCTGATGGCGAGATGATGGATATGGCAAGCCAACAATTAGAAAATGTCTA
TGCTGAAATGACTGATCAAAGATGTATGATCGACTCACTTAAAGATGAAT
TGGAGGActctgaaaatgataaaaatcgtTTACAAAACTCGATGAGCGAA
AAGGTAAGGAAAATCAAACTCAAATCCAGTCCCTTAGTTCCCTTTTTCTG
ATTCCAAAGTTCAAGTCCTGCAAGTGGCTTTTGGGTACGATACAtgcaag
tgtctgtccctatatcaggctcgcattatgtttagtttgagaacaataga
gccaatgtttaggtaccaaaaactgagccttcatatgcttataaatgtta
tgcttataaaagaaaaaacatgtattgcagaaaaagtgcactttttttat
atgaacaaattaagaacactTCCAGCCTCAGATTTGACAAATTACTAAGA
AAATACTGCGAATTCTGGTTATATAAAAAGTGGGTGTAATATTTGACAAG
TCACGTGACCTATTTagagcaattccattggtcaaacaCTACTTAAACGC
AATAATATTACGTGGTTCGGCCTACAATtagggtcaaaatatattgggaa
ttttggttaattccttgTTTTCAGATATTTAAAGATCGGAAgaaaaagtc
gcttttgggcaaattgataaattcattcgaatatttcaatttgggagggg
tttatagacttccaggctatattctgagccctatcggaccattcttgaac
ttttagtTCCTCAGATCCTCAGTCTCAACTCTAGCGTTAAAATTCAGAGT
TAAAACACTACtcgtccaacctaatttagagcgcttccaaatcgtttgtg
gttgtaagatttggtgggaatttcccttttttctcaaatattatgacttt
gattgtagtCAATCCGCTCCTTATGAACCATTCATTTCTAAGCCCAAAGA
TGCTAGGTTTAAATCTCTTGTAAGGGAGTGAATCCACTTATTTTTTTATA
CAGCAAATTAGTtcatattcttgaaattttgctgaaagATGCAGAATTTG
GAGACGGGAAAACCTCACTGAGACAAAAGAACTTTAACAGACTATAATAG
AGGCCTTccagtcacctttcaaatcacaaaatcacgCAAAAGAATGTCTA
CATCACGTAATCAcgagttaaatttcctttctatcacgatcacgttaATC
AAGTTGTTTCCTCCAATCACGCAATCATGCACTTTAAGAtcttaaatcac
gaaatcacgaacttgaaaaaacgccaatcacggcatcacgaaaaccgcta
gGGGATCTCAATATATTTAGCAAGTTAATCTACTCTGTCTTTCTCCACAT
AGGATAAGATCATTGCAACGCGGAACTACAAAATCGCCGATTTACAAGCG
GAAGTTGATACTGGATCAACGCGCATCAACGAATCGAACGTGCGCTATGA
AAAAGCCACGACACGTATCGACGAATTGGTCGCTGTGTGTGCTGATAAAG
ATAATCAGCTTTTGACTAATCAGCAAGAGATTGAGCTCTTACGTAATGAG
AAAAGTAGGCTGGAAGCTAAGCTATTATGTGATGCGAGCGAGAAAAGAAC
GCTTGCGCAACGAGTTGCTATGAAGGCATCGCGTGCTGGAAGTTCTCTGA
AGAAATTAAGTAATCCAGGTCGTTGGTGTGGAAGCGCAAGATCAACTCGG
TTTCGAGAAATGGCGGGTGACGAGAGTATGCCCTTTCTACCGGCAACCGA
GTGTGGAGCTGAACAAAGCTCACCGACTGTTGACTCTGTCAGAGACAATA
CCACCATCCTCGCCCCCCTTTCTGCTACCAGTAGCAACACAAGTACCGAA
ACACCTTCCaaacaaaactttaaaatcaatAATAAAGACAGTAAGaaagg
caaaaaagaaaaaactaagaaatcATCAATGTTTGGTAGAGTCTTCAGAA
AATCAAAGGCGTTAGAAAAATCGTTGTCAcagacatccactgaattgatt
gATGATAAATGCAAATCTACAATCATCAAAGATGTAGATAATCAAGAAAC
CACCCCGCCCATTGGAACAACGCCCATTGGAACAAGGCCCATTGGAACAA
CGCCCATGTCACCAACCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060652TCONS_00060652Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060652-proteinTCONS_00060652-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:436649..440016 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.03	0.1	0.03	0	0	0	0	0.03	0.03	0.16	0.04	0.02	0.28	0	0	0	0.07	0	0	0	0	0	0	0.46	0.53	0.04	0	0.03	0.03