XLOC_038143 (gene) - C. hemisphaerica

Overview
NameXLOC_038143
Unique NameXLOC_038143
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_348:455120..458721+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038143 ID=XLOC_038143|Name=XLOC_038143|organism=Clytia hemisphaerica|type=gene|length=3602bp|location=Sequence derived from alignment at scaffold_348:455120..458721+ (Clytia hemisphaerica)
GTCAAGTTTTTATATTCCCTTGACGTTTGATTTTCCTCTCCCTATTGGAG
AACAAGTTTGCTAACGGTGGGAATATATTGGTCGTTTAGCTTACGGGGGT
CAATTGAACGATTCtattctttaactcgaacaaataaaaagtaaaatgaa
acCCCCTGTAAAGATTTgacaagaaaaaacataaaaggCTCTTCTCAAAT
CAGGTCATTCATAATGCGTCGCCCAAGGCGACTCCAGGTCAACTGGAAGA
GCTTAGTGGGAGCTGCACATGGTAAAAGAACGCTAAAACTCCGACCAAAC
CAGCGGGACCTTTACACGTGTCCTATAAAGCTATGTTTACATGGTGACTT
CAAAAGTTGCAGAGGGTTGAGAAAGCATATCAACACTAAACATCCTTGGT
ACTATTACTTTGACGAGCAGCCTGAAGTTAAACGTGAGGACATGACTGAC
TTTCCTGTTGCACCAAAGAGAGCATCTACTGCCGGTAAGCCGTCTTTTTC
ATTGGATGAAGGAATTGGAAGAGACTTTTTAACTTGGCTTGGAACATCTT
GTGGAGGTGGAAAAAGCAATAAGGAGGCTAGACAGATTGGCAAACGagct
atgaaatattttatgcatGCCATGGGTAACAATGAAAATGACATTGACCT
AACTAACGAATTTGTTGACTGTTGTTTGTCATCTGCTTCAATTTTCATAT
CGTTTCTAAAAGTGATAGAAGAAGAATGGAAAGTTGGTCCCTCCGGTGCT
GTAAACTACGTAAAGTGTATTACAGATTTCATTGATTTTCGAAAAGCAAA
TGGAGTTTCTGACAATACTCTTCGTTGCTTCACAGTTGTGGAAGTTTATC
TCAGGCGAGCAAATGAAAACCTTCGAAAGAAAAAGAACTTAGACTGTAAT
CGAAACCTCGACTTGGAAACCCTTATCGCCAGAAACAGCTGGGCAACGTT
GGAGGAAATGGAAGTGGTCATACCTTTCCACATGAAACAGTTCAAAAAGA
TAATTGAGAAGTGTTCTGAAAGCCACGAAGCAAGATTTCTAACGAAAGGT
GAATTGGTCTTCTGTATTCGATTCATCACAGCTTTGCTTTTCCTCCGAGT
TAAATGCTCAAGACCTATGACGTACCAGTTTCTCACGGTTGAAATGGTTA
ACAAAGCAAGAAATAATGGTGGATTTGTCGATCAAAGAGAGTTCAAAACA
GCATCAAGGTATGATTATGGTTCTAAAGAATTTGTATTAGATTAAGACAA
AGTCTACTTTTTCTGCTTGATATCCTAATTTTAAGAAACGATGATTTTTG
ATCTAATAAATGATACCATACATTTTATATCACTTACTGTATCTTTAAAT
CAAAGTTTAATTCTCATTTAAATCATATCTATCAtatgataattattatt
ttgttatgATATTTAAACTGTTTTATTAATAGTATAATATAATAACAATG
CATGTTTATTGTTTTAAGGTATATCTTCGACACTTTGATATTATCAGACG
ATACGATAGAGATTATTGATTTGTACTTAGAGTACATCCGACCTCGTCTC
AATCCACAATGCGACTTCCTTCTACTCTCAACAAATGGAACTCAATTTCA
ATCCTTGACTTCAGCTATGACGATCCTCGTTCATGAAGCCATTGGCAAGC
ACATCAACCCAACTCGTTATAGGCAAATAGTCGAAACGGAAAGCAGCGAA
AGGCTTAACTTGGAAGAGCAACATTATATCACCGAAGATCAAAAGCACAG
CTCTACTGTAGCTAAAATACACTACAAGAAGACTCAATCGAGGATCGTTG
CAGTAGAGGGACGTAAATGTATGGAAAAGATGACAAAGGACGCAAGGTCT
GACGGCAACAAAAACCTTGTTGAAATGTTTAATAATATATCTTGTTCTTT
CGATAACGACGTATTGAGTCATAGTCGACGCATAATAGAAGGTATGAAAC
CTAACGCTCAAAATTCGATTTCGAGTGCTTCTTGCTCATCAAGCCATATG
GAAGTTGATACCGATCCATACCAACCAGTGAGTGAATCACTAAACGAATC
GACAGATATGGTCATCACAGAAACTTTTCCTACTAATAACACTCCAGCCG
TGGCTGATGTACAGGAAGTCGGCATCTTAAATATACCAAATGACAATATT
GTTATCAAAAAGGAGGCTGCTCGACAACAAACCAACAGAAAACAACATAA
GAATGTGAAATTCACTAGTGCAGAAGATCATTGCNTTTTAAGAAACGATG
ATTTTTGATCTAATAAATGATACCATACATTTTATATCACTTACTGTATC
TTTAAATCAAAGTTTAATTCTCATTTAGATATATCTATCAtatgataatt
attattttgttatgATATTTAAACTGTTTTATTAATAGTATAATAATAAC
AATGCATGTTTATTGTTTTAAGGTATATCTTCGACACTTTGATATTATCA
GACGATACGATAGAGATTATTGATTTGTACTTAGAGTACATCCGACCTCG
TCTCAATCCACAATGCGACTTCCTTCTACTCTCAACAAATGGAACTCAAT
TTCAATCCTTGACTTCAGCTATGACGATCCTCGTTCATGAAGCCATTGGC
AAGCACATCAACCCAACTCGTTATAGGCAAATAGTCGAAACGGAAAGCAG
CGAAAGGCTTAACTTGGAAGAGCAACATTATATCACCGAAGATCAAAAGC
ACAGCTCTACTGTAGCTAAAATACACTACAAGAAGACTCAATCGAGGATC
GTTGCAGTAGAGGGACGTAAATGTATGGAAAAGATGACAAAGGACGCAAG
GTCTGACGGCAACAAAAACCTTGTTGAAATGTTTAATAATATATCTTGTT
CTTTCGATAACGACGTATTGAGTCATAGTCGACGCATAATAGAAGGTATG
AAACCTAACGCTCAAAATTCGATTTCGAGTGCTTCTTGCTCATCAAGCCA
TATGGAAGTTGATACCGATCCATACCAACCAGTGAGTGAATCACTAAACG
AATCGACAGATATGGTCATCACAGAAACTTTTCCTACTAATAACACTCCA
GCCGTGGCTGATGTACAGGAAGTCAGCATCTTAAATATACCAAATGACAA
TATTGTTATCAAAAAGGAGGCTGCTCGACAACAAACTAACAGAAAACAAC
CTAAAAATGTGAAATTCACTAGTGCAGAAGATCATTGTTTAAAGCAGGGC
ATCGAAAAATACGGTCGTAAATCATGGGCTATAATTTTGAAAGACCCTAA
CTTAAAGTTTCATGAAACTAGAACTAGAGATTCTTTGAGGGTTAGAGCTG
ACAGTGCTTGCTTTAGAAAGCTTTTTAATGATAATAAACAAGCAGCCTGT
CGGCATTAAGGCCCAGCTCTCTTTCAGTATCGTCGGGCATCTCGCATCTC
TCCATCATTCCTGCAGATATCAATcagtacttttttttattttcagaccC
TACAGAACTGATGTTCCCGTGTTTCCACCATACATGCCCGACTCATTTCG
ACTGTGCGAGTCAAACAGATAATAAGAATTTCCATGAAACATAAAAGCTG
TTCCACTAGACCCACCTAAAAATATTCCACTATTATAACCGGCAGGTATT
TC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060653TCONS_00060653Clytia hemisphaericatranscript
TCONS_00060654TCONS_00060654Clytia hemisphaericatranscript
TCONS_00060655TCONS_00060655Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060655-proteinTCONS_00060655-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:455120..458721 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5	3.58	1.5	1.29	0.79	0.48	0.81	0.7	0.78	0.63	0.35	1.52	0.53	0.81	0.4	0.3	0.38	0.38	0.77	0.72	0.81	1.14	1.02	1.24	1.51	1.01	0.8	0.57	0.8	0.59