XLOC_038148 (gene) - C. hemisphaerica

Overview
NameXLOC_038148
Unique NameXLOC_038148
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_348:41980..45813-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038148 ID=XLOC_038148|Name=XLOC_038148|organism=Clytia hemisphaerica|type=gene|length=3834bp|location=Sequence derived from alignment at scaffold_348:41980..45813- (Clytia hemisphaerica)
GAAAATCATTCCCATCTCTAGCATCTTGTGGAGAAAAGGAATAAATAGGG
CATAAGTGAAGAAGAAGCATTCTCTCTTNAATCATTCCCATCTCTAGCAT
CTTGTGGAGAAAAGGAATAAATAGAGCATAAGTGAAAAAGAAGTATTCTC
TCTTGAAAGGTAAGTGATTTGGACATTATTTCAATCTAATATTGATTTCA
TTATTTAAAGTGAATTTCATAATTGTCAAGTCAAATTCTCTTTCAGAGAC
AGGTTTATAGGTCCAGCAATCCCTTATAAAGTTTCCATTACTCTAGAAAA
TTTGATTTTTCCAGTTGATGAGAAGAATCTCTTCACTGTATACTGCTTAT
CTTCTGGCACTGAAAATTCAAAAACAAAAAAGGATTTAGCATTTTCTCAA
CTTTTTTATTCAGCAATCATGAGAAGTTTGGCGATTCTTTTGGTCGCTAC
CATCATTGGTCAATCTTACGCAGGTATTGTTTATTGTTGTTATTCAATCT
TATTCAATTTTTCTTTCAAAAATCCGCTCGATTTTCTTAAGACCTTCTAG
GTCCCATTGATATTTTTTGGGGGGTTTAGGGAGGTAATTCAAGGAAATTT
TTCAAAATTATTAAAACTGCAATATTCAATTGTCAAGACATTTGTTATCA
CTAAGGAAAATTTAATGTGTCAAACATTGTAAAACCTGGGAGAGCGGGGT
CAAATCAGTGAATAACATTTCTTCCAACAACCAAGGGATCCTAAGATGTT
ATAGCTTCCATATAAAGACAACTTTGTAAGATTTTCAACGTCTAAAAATT
GTGTATTCTAACGTAACTCCACAATAAGATAACTCGAAAAATAAACTAAT
TCATTACATTTTCTTAAATTTCAGGTTATCTTGGGTGCTATAGGAAACCA
TGCGTCGCTGCAAACACTGACCGATGTGAAAATNAAAAATCGTGTATTCT
AACGTAACTCCACAATAAGATAACTCGAAAAATTAGCTAATTCATTACAT
TTTCTTTAATTTCAGGTTATCTTGGGTGCTATAGGAAACCATGCGTCGCT
GCAAACACTGACCAATGTGAAAATAAACCATATGGACGATACCAATGTAT
CTGCAAAGAGGGATTCTCTGGTCGCAGATGTGAAACAAGTAAGTCACCTT
GCTTTATGGATGAGCTGTGAAGTGTTTGAATTCTATGATACACATGAATT
AAAAAGATTATTATAGTTTATGTATCGGATGTCAAACAATTACGTCATTC
CTTATTTACACAAAAATTATTTTAGCTCTGGTTTCTAATTGTTATTGTGA
ATTATGAAGTGGGCAGAAAGTTTGCTAACTTTGTGTCTGCTCTAATAATA
AGAATAAATAGGTCAGAATGTCACCATGCCAGTGTGGTGAATATAAGAAC
AGATTTCTATGTTTTATTCAAAGAAATTTAAAACCTTACGGCGAGTCTTT
CAAAGGGGTNGATTTCTATGTTTTTTTCAAAGAAATTTAAAACCTTACGG
CGAGTCTTTCAAAGGGGTCATCAGACAGTTTGATATTTTTTCTGGCCTGT
AAAATCATTCCCACAATCCTGAACGAAAGCTCTGAATCCCGGGGGAGGAT
ACTTAGACAAATGGAGTGTCTAGTATTTGGCGCCCTTAACAATACCATAA
TTGGATTTCCAAAGTCCCGGTAAGGGTAGGAAAAAAGTAATATAATATTT
TAGTAAAATAGTCAGAACCTTTTATCTTTCTTTCTTCTATCATAACATTA
TCAGCTGTAGTCAATGTGTTAGACATGATGTTTTGTCTTATTGCTAATGT
TTTAAAATGATTTAATACTTTGGGTTTTTTTTTCTGAAATAGATGACAAT
GATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAAT
TGCTTCCTTCACTTGCAAATGCAAACGTGGATTCAATGGAAAATTCTGTA
AGAACAACATCGATGATTGCCGAGATGTCAAATGCTTAAACGGAGGAACC
TGCGAAGATGGAATTGCTTCTTTCACTTGCAAATGCAAGAACGGATTCAA
TGGAGAATTCTGTAAAAACAACATCGATGATTGCCAAGGTGTCAAATGCT
TAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGC
AAACGTGGATTCAATGGAGAATTCTGTAAAAACAACATCGATGATTGCCG
AGGTGTGAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATTGCTTCTT
TCACTTGCAAATGCAAGAACGGATTCAATGGAGAATTCTGTAAAAACAAC
ATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGA
CGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGGAAAAT
TCTGTAAAAACAACATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGT
GGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGG
ATTCAATGGAAAATTCTGTAAAAACAACATCGATGATTGCCAAGGTGTCA
GATGTCAAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGC
AAATGCAAGAATGGATTCAATGGAAAATTCTGTAAAAACAACATCGATGA
TTGCCGAGATGTCAAATGCTTAAACGGTGGAACCTGCGAAGACGGAATCG
CTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGGTAAATTCTGCCAG
AACAACATTGATGATTGCCGAGGTGTCACTTGCCAAAATGAAGGAAGCTG
CGAAGATGGAATCGCTTCTTTCACTTGCAAATGCAAAAACGGATTCAATG
GAAAATTCTGCCAAAATAACATTGACGATTGCAAGCGCGTCAGATGTCTT
AATGGGGGAACTTGCAAAGATGGGATTGCTTCTTTTACTTGTCAATGCAA
GCCTGGATTCTCCGGAAAATTCTGTCAAGGTTTGTTTTTTCATATTGTTA
CCAATATTTTTTTGCTCCAAGTCATCTTGAAATATTAAAAGCAAATTCAA
TGGTTGATAAAAAATGAAGCAAAACTTGTAACTCGGAACCCATTATTTAA
TGTACCAAGAGACCCGGAAATTGTTTTATTTCCTATGCCGCTATACAAAT
TCTTGTTGAAAGTTGTATTTCCCGAAATCAGTTCTTTTAAGTGATTTATT
GCAATTTGTTTTTCTTCGCCAGTTCCATCATGTCACCCTAACCCATGTCA
GAATGGTGGAAAATGTTTGAAACATGGAAAAGCCATCAGATGTTGGTGTA
AACAAGGCTATGAAGGAAGATTCTGTGAAACAAGTGTCAAAGGTAACATT
TAAAATATCAAAAAATCATTTCCTTTCGATGATTAAAGTTGCAATTAAAA
TACAACAATTTTAATTTTGAAAATTTTTCTTAAAAAATCTTATTTGAGAA
AATGTCGGAATTCTTTGGAATTCTTTTTCTTTGCTCTTACAAAATCATTG
GAAATCAACTATTTAGAGGCTGTATTAACAATTACTTTACGAAGTACTGA
AATACATAATAAAGTTAACAAATCTTTCATTTGCCAGAATGCAATTACCA
CTGCAGCAGCCAGCGTGGATGGTGCCGTATTATGGGAACCGACGGCCGTA
TCTATGACAACTATTGTCAATTCGAGCGTGCTCAATGCAAAAATAAATCA
CTTCGAATCAAGAAGAAACTCTGTGGTTACTGGTAAATTTTGTGAATATT
TTAGACTAGTTTAATTCACAATGAAATTTCAATACTTCGTTAGAATTTGA
AGCTTTTCAGACTTTTTTTCACTCTTTGCGGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060667TCONS_00060667Clytia hemisphaericatranscript
TCONS_00060666TCONS_00060666Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060667-proteinTCONS_00060667-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:41980..45813 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.06	0	0.64	0.62	0.39	0.29	0.12	0.07	0.91	3.31	766.66	173.43	0.47	0.64	0.56	0.11	0.28	0.35	0.14	0.05	0.35	0.42	0	0	0	0