XLOC_038276 (gene) - C. hemisphaerica

Overview
NameXLOC_038276
Unique NameXLOC_038276
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:185809..189136-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038276 ID=XLOC_038276|Name=XLOC_038276|organism=Clytia hemisphaerica|type=gene|length=3328bp|location=Sequence derived from alignment at scaffold_350:185809..189136- (Clytia hemisphaerica)
CATTTATCTGTTTCTTTCATTCAGATATAATAAAATGAATATATGCAATA
ATTACATACCAAAGCGACTTTTCCGATTGGCTGATGTGACTAGACGTCTG
GTGACGAGTGCCCGTTTTGCAGCGGCCAATCAACAAGTAGAACGAGTACA
GGAAGAACGAAATGAACTGGAAGAAAGTGACCCGTTTCTGAAAAATGAAA
TCAAGAAATATAATACAGGTACGTGTGATCATGTATTTTGTAAGTGAAGG
TGTGTCCCTTAGATTGATTCGTTTCATCTTTAAAGTTTTATGTTTGCAAG
TACTTGTTTAGTCCGAACAGAAATTTGAAGGAAATTTATTTTCATTCATT
TTGATAAAGAAGGACGAAGGATAATCCCGTCGATTAAGACGGCGTGAGTC
CTATCCAGTCATAGTTACCTATTCCAGGATATTAGATAAGGCGTATCGGC
GACATTACACGAAAACAAGAGCTGAGTGCTTATTCATGCGATATCCCAAA
TATGAATCAATAAGCCGCTCTTATATCAGAGTGTATTATATCAGATTTCC
TTCCCATTGTATGGGTTGACACGTGTGAATCTACCTCTAATTGCCAAGTG
AATCGTAGCACCGATTCGGATTCGATTCTTGGTCTCCCGTTTAGGATTTG
AGAACGATGGTCATTACGTCTTCTTTTTATTAGTGGGAGAAAAAGGTTTT
GACTTAAAATTAGTTAACGATATTATTCAAATGAAAATGGACGGACCATT
ACAAAGTAATATTTTATAACTTTCTAAATAGTTGAAATGTTCTTAGTCCC
TTATAGGAAAACGAGTAATAAGACCGGCTTAAGATAAAAAATGTTTATAA
AATTATTAATTGAAATTTATTAAAAATTGTTTATGTTTGCAGGTAAAAGA
TGGTTGGCACGAATGATGGGTCAAGATCCGGAAAATTTTTCACAGAAGGA
TGTGGATGAAGCTATTGCATATTTGTTGCCAAGCAGTTTGTTTGCCAAAG
ATGCACGACCTGTCATGAAACACCCTTATGAACTCTTCCCCAAAACTAAA
GAATCATTGGTAAGACTCTGTGTTTATTCAGCTTAATCCAGGTTTAAGTC
TCCGACGTGTGAGGTTAAAATAGAATGGAACCTTTTTTGGTAAATTCAGG
TGAGAATCCTTAAAGTAACTTAGAGTGGAAATCAATATTTTCAACCAACC
AATATTAAAAGCAACATTTTCAGTGCCGCCTATTCGCGTATTTTATCCAT
AGAATTATTATCAGATAGAATGAATTCATGCTTTTTTCCTCAAAATGAAG
CGTGTCTGTAAGGGGTCCCTTAGTTGCAATGGGAATTCAATTGCACGTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTGAATTCTCAAAAAA
TTATGCACATAATTTGATTATTTTCAACTGGAAATTTCGGGCACTTCGGT
CCCCTCAATGCAAATAAGAATTACATATTTGAATTCAGCTCATTTTATAG
ATTCACCAGTGTTGAAAACTACATATTTGAAAACGCACTTCTAAGAAAGG
AAATTTGGGTGTTAAGTTTTCACCTAAATTAGATATTCTTTCCGTATTGA
CTAAAATAGATTTTTTAATTTTAGGAGTTAAAATCGAAGGAATCACTAAA
TTTCAGCTCCTAAAATTCCAGATTGTAAGCTAAAATAGATTTGTAAATAT
GAAACGTTTTCCAAAACTAAAAATTTCGTAACTGAGAAAAAATACCGTGC
AAACATACCCTTATAAAGAGATTTCTATCCACGCATCAGATTTTGAGAAA
CTGTTTTTACGACCATTAATCACTTTTAACAAAGAAAATCTCAATAGATG
ACGACGTAGCCAAAGTGAGATATTATTCTATCTGATAACAGTTCACTGTT
TTATCCATCTATATTTAGTAATTTAGGCTTAATAGGAAGGAAAAAAACCT
CTAAATTTCTGTTCATCTTTTTTTAGTTCGATAGTAACAACCGACCACTT
TCAAGTGCTTTTTACACTGGTAAACCAAAGTTTTACGATTTGACGTACCA
AGTATGGGAGTTGAAGGAAAAATTAGACACCAATACCGCCATTACGGCTG
AAGACTCCCCTGCGCCGTCCAATGAAGATAAAGTGATGCAATGGATGAAA
CAATATCAACTGGAGCAAAAATTAAACGAGAAACTAAATGAAAAATTATA
TGATATGATANATTACGGCTGAAGACTCTCCTGCGCCGTCCAATGAAGAT
AAAGTGATGCAATGGATGAAACAATATCAACTGGAGCAAAAATTAAACGA
GAAACTAAATGAAAAATTATATGATATGATAATGTTTCGGTTGAAAAAGT
TATCGCAACATGAACGAGCTAATGAGATTAAAGGTTTCTTGCAACAATAC
CAGGTGCCCACGAGTTCAGGAAGTACTGAGCAGTTGAAAGATGTGGAGAT
TTACGACGGAGTTGCGCGTGCTATGGGTTACCGTAAGACGTCTATCGCCG
AAGTTATCGTTCGTCCCGGAGAGGGTCACATTATGGTCAACGATAAGAAA
TTCTTGGATTATTTTTATTTGAGAAACGACCGCGAGCAAATTATGTATCC
TCTTTTATTGACTGAGTCTTTAAGCAAATTCAACATCGAAGCGAACGCAA
TCGGAGGCGGTTCGACTGGAAAATCTGGTGCTATCCGCTTAGGGATAAGT
CGGGCGATCGCTGCGTTATGCCCAGAACATTTCGATGTGCTGAATCAGCA
TCAGTTATTGACTAGAGACTATCGGCAGAAAGAACGTAAGAAGCCAGGTC
GAAAGAAGGCTCGACGTGCTTTCCAATGGGTCAAACGTTGAAAAGGATGA
CTCTTCCATTGTAAACGCAACCTTTTCAATATAATCAGTGTAAAAGAAAA
AGAGATTTATTTTCCCATAACATTTTTTTCTGCATTCTTTGGTTGATCTT
TTTGAAGCTTTTCAACCTGATCGAATTTCTCATTGAAACAGAGCCGCTGA
CTTACTTTAGTGGGATATATTTTCGCGGGGATTAAATTTCGCAGATCTCG
CGGATTTGGGTGTCATTAAGTCTAATGGAAATTTGGAAAGGCCTTATCCA
CGAAATATTACTAAAAAGCTCAAAAAATGTTAAATAAATATATTTTGAAT
GTTTGCTAAGGCGCTGATAATGCCTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060976TCONS_00060976Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060976-proteinTCONS_00060976-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:185809..189136 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.43	39.72	18.48	14.37	33.45	26.09	23.63	25.23	20.58	21.05	15.7	16.73	13.7	13.16	16.86	19.29	38.05	33.3	7.85	7.37	22.06	21.6	49.02	41.34	18.98	21.22	29.38	26.34	27.17	28.52