XLOC_038320 (gene) - C. hemisphaerica

Overview
NameXLOC_038320
Unique NameXLOC_038320
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:135917..139582+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038320 ID=XLOC_038320|Name=XLOC_038320|organism=Clytia hemisphaerica|type=gene|length=3666bp|location=Sequence derived from alignment at scaffold_354:135917..139582+ (Clytia hemisphaerica)
CATCAACAAAGAAGACAAACTTAAAACAATCAACTTCATCATAAGAAGAA
TTGAAGATGAAGATCTGGAAGGCTTTGTTACTCATCACTTTCTTAGTGTA
CACTGTTTACTGTGAGTTTTTTTTGGcattataatttctttttcacagaT
AGAAAGAAGAGTTCTTTTCCCGGCTCTAATTGAATTATATATAATATTTA
AGagcatacactacacaatataattgtcaggcaatatattgatgatatat
tgctgaatgccAGCAATATATttaaaaggtgtccgcaatatattgtacAG
CTCAATTTGCATTTTATTTTCCAACAATATAGAAGGGGGattatttacag
aaaaaaaaatttctttttataatagagtacctgttatttacttcgtacat
tacggtccaaTAACGATATTATCAACTATtattcgtcaatatattgtgta
gtctaagtaacccttaacattttcaagtttttgaaaaacatatttcTCAA
AAGACATTCTTTTAGCCTCTAAAAATCTCTTTCTAGGTTTCTAGTATCAA
CGTTGTTTATAGAAAAGAAGTTAAGTTGTGTATTTACCAAGTCCATGTAG
AGAATTATAGCCTGTAAACCTGTTCTCTTATCTTCAAAGGTGAAGAAACT
GAAGAGATTGAAAGCAGCTTGGAAGATGTTGCTGACATTGAAGAAACACC
TGCTTTAACATCGAATGACGAAGAAACAAATGACGAAGATGAAGCAGAGG
AGAATGACGAACAAGAAGAAAGTCAAATTCAACAAGATGAAGAAAACGGT
ATGAAAAGATTTCCATCCCATTAAGGCTTTGCATGAAATAGCAAAACAAC
CAATGACCAATGAACAAGAAAATCACAGTCTAAATATTCAAACTGAAGTG
GGAGATCGCTTCCAACCCCCTATTTGACAAAGGAACCCCCCCTGAAAAgt
attagcctatttcataggattcgtgcatCGGTTTTATGCCATTTTCTATT
CAAATTACACGCCACAATGCACACAAATACGAACATATTTCCCTTTAATT
AATAACGCGGGGGATtacccacagatatctgtaaagcccgaagggctaga
taggcaactttaagctttctccagcaaaaaaaagtgaagcaaaaatttga
cgttttaaattttgtgctgatggataggatctagcattttaattgttttc
agagaacgagataaaaaaaagtaggcggcaaacgctatttcgcatctctc
aaaccagtgaaattgcttgttgtcacgtgattttttggtaggaaatccta
ccaaagcctgcttcacttttcgataaaggccgcaaatctagcccttcggg
ctttactaTCTGTGGGATTACCTACTTTTCAAAAGTACAGCCTTTTTGTG
TTTCCTGCCAACTACTAGGTGGCTTAAAGAGACATAAAAgcactgacgaa
atttgtaaacaaaccgtatgcagcgcgATACAAAATCGagacaaatgtca
catgtcaaaacaaaaaaataaaaacaaatatgtctgattttgattgtttc
gaatgttttacaagtttgttttggacacgtgattataattgttctcttta
atgacacgtggttcgcacaATGTtaacattttactacttttatgttcCTT
TAAGGTCGCTTTCAATCTTCTAACATCAAATGTAATGAACGCTACACTTT
GTTAACCATCTCCCAAAGCTCATCTTATTTCATAAAATCAATCCCACACA
TAATGGGCTCCAGAAAATATTTGTAtattgggggtggaggatataaaatt
ttttggaaatttattccccggacattgtgaactttgacccccggacaaca
gatctcatcccccggacaagcatcggttgacccctggacatttaaaatca
cccctaatcagaacaaatttgcccccaaaacaacgcaaattttgaagatt
tttcactaccccccggacaaaatatccaatatatcctccatcccccatGT
ACAAAAGTTTTCCGGAAGAGTCAAATGAAGTCTCAACCAAATTTAAGACA
CAAATAAGTTACTCTAGAAATAATATAACCTGTTTATAGATCCTGGACGT
CGCCCTCACCCTAGTTCAGGGGGCTGGCAACTAGTACGAGGAACATGCAA
TTTAAAAAGATTATCGAAATCGTGCCATGTTACGCGAAGAAGATGTTTAA
GATACAGATACCATGGTAAGTTAtaatatacacgctttttttataagaat
gcactttataagaatgtccatgatgaaaatggccaaaaaaataagaatac
tgtaatgctaagaatatcaccatcatggaattttgctactcaagctaaga
atgcgattttttagagcattttcaattatacattgtcaattacccccaag
aaaggctcactcctttcacaaaaatgccattttatgctcgAGGCGTATGT
ACTAAacttaagaatgctgtaagaatattttaggattcTTTTCCCAATAA
AGCTAGGAATATCcatgttgaaataaaaaaagcgtgtacatgtATAATAG
GCAGATATTCAATaagtaaaagttggttatttagatttattaacccgagg
tgatgtgATATTCAACGAGGTGAAGCtgagttgaatatacatcaccgatg
gttaataaatccaataaccaacgaaaacctattgaaatATATATTCTATT
ATATACTTAGAGGCAAAAACAaaagtataaaatatataaatagtCGAACG
ATTCacataaaacactcccataatcgaacATTAGaatgcttttctttttt
aatgattttcttaattactttgagtcataaaatttgCTCATGAAATCGAT
AGTAGATTTGttcaaataaatttctttgataagaGCGAAAAAAAGACAAA
CTTTGAAAgtcgaatttgaaaaaaaaattctactatGGTATAACAGCCGT
GGTATATTAGGAATTATCCAATCGCTGTTTTTGCCACAGAAAATTAATCT
TGttgaatagaccttatcggagtttttgatttttctaaaaaagcgatgca
ttgtggaattgtttcgagtgtattacaatagaaatctcttaggaattctt
cgagggaattctattgtaatacactcgaaacaatcccacaatgcatcgct
tttttagaaaaataaaaaaccccGATAAGGAATATTCAATCTTTATCTTA
AAGGATCATACGGAAGAAGATGCATGattcgaaaaattttcagaagttGT
ACAACCGTTTCTCGAAAGCGATGCAGATTCTGTCGCCGTACTAGACACGG
TAGAAAATGTGAACGTCGATTTATCGGTCAACGAATCAGACGAACAAGAC
CCGATAATAAAGTTGTAAACATCCCCCCACCACGATATCATTaaggaaaa
attataattatcaaaaatgattgaaatttccatttgacttgaaaacttct
tgaatcgatttttattttttctaacattttGTAAATAATTTCAACTTACC
TAAACAAGTAGCAATCCATCAACATCTTCAAACATTTCCAGCGAAATTCA
GGAACAGGAACATATATATTGTCATCTTTACTTGAATTTATTTTCcactt
tatttttaatatttcctCCATTATATACGGAATTCTTcatattgtaattt
tttttctagagtaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061038TCONS_00061038Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061038-proteinTCONS_00061038-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:135917..139582 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.28	0.36	0.26	0.69	0.52	0.28	0.27	0.86	0.69	0.5	0.57	2.56	18.75	2.64	0.43	4.15	20.39	0.12	0	0.11	0.08	0.28	0.18	0	0	0.1	0.16	0.07	0.07