XLOC_038827 (gene) - C. hemisphaerica

Overview
NameXLOC_038827
Unique NameXLOC_038827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1174442..1179513+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038827 ID=XLOC_038827|Name=XLOC_038827|organism=Clytia hemisphaerica|type=gene|length=5072bp|location=Sequence derived from alignment at scaffold_361:1174442..1179513+ (Clytia hemisphaerica)
TACAGCAAAACGATAaagtaataataaaataaatgagTGAATTGAACAGT CTGAAGAATGATGGCCAAAACTTGTCACAACTATTTAAGAAAGGATGGAA AGATTTTCTGGAGATAGAAGACAGCTCTGAGCCATCAAATTCTGATAGTT ATCAGGTTTGTGTTCTACTATAACATTATTTTAACCTGATTCATTCCTTT ACTTTGTTAAATAAGTAGTCATTGTTTCTGAAATTATTTATTCTGTTTTT TACTCTCATTCATAGAAAAAGACAAAGTTGTGTATCGAGACATTCATAAA ATGTACACATATGGTGAATATTCTGGGGCTGTTCAGTTCTAATGAACACA TTGATGAAATTTCCACAGAAACTATAAGGTAAAGTTTTGCTTCTGTCACT CTGAACAACTTAGCTTGAGTTTAATCAGGCTGTTAAACATACATAATACC AATTCATCTGTGtttgttaacttttttgtttcattttatttcagCTTTTT GCTACTACCTGCTTTCCTTGGCGAGTTGTCGTTGAAATTAATTTCTGATG AAAGAAAGTCATCCGTCAAAAACGCATTGGTAAATATTcttgtttttgat ttaaaaatttatcttttttctttttttgatttccgTGGAGTTGCCTAAAA TCAGAGgggatgaaacaaaaaaaaccttTGACTTTGTGTACTTTCTTTTC TAGGTGTATTTTCGTTCATTTCTGAAACATTGTCAGGATTATCAAATTAC AAATAAGGTAACTTTGTCCACCAAGTTTGTTGTTCAAGTGGATCAATATG GATTTCCGTCCCTAAAACAAAcctttatttaattttagacATACTGTCCA GATTAACCGTTGGCACAGCTTCCTTTTCGTAATATTAtgatttatttaca ttttttatacCGGACATCAATAATGTGACCAGCATAATTCTTAAAGTAGT ATGGGGACCAGGGTTAGAATATTTCATCCTacattacaaggtctcaaagt ATTATCATTAGTTTGCAATTTATGTTATACACTTTCTTATTACTAGAAAT TATCACATTACATAGAAGATGAAAGTGAGGAAGAGAAAAAGCCAGACACA GACACAATTAGAAATAAGATACGggaagaaaaaatttcaagattcaaaga aaataaactgcTTGAAAACTCCATAAAGGTTGGTAGGACATTCTAGAATT TCACTTCTGAAGAGGTATTGATtcttttcgccattttttgccctttacTG GGAAATGTTCCTGGGGGGAGGCACTCAACGTAGATGACCTACCGTACGTG TAGCCCTTAAGGATGTGTTCTCAAGATCAAAAATTACACTGTTAGAGTCG AAATGAGCGAAGATCAGTGAAAATGCACTCTGGGGATGTAAAAGTGAgca aaacgaagatttttgagcaaaattaaaaaaacgcTGAAAAATCCTTGCCC TTAaaataaacatattttcaaAGGGTTAATTTTTCACCCAAATCTattca aatttgacaaaatttcctCTACACTGAGAGGGTCGATCTCGAAGGCCTGA TTTTGGGCTGCTTTTAAATCAAGTGCCTCATGTTCTGTCTTAGGTGTGAG GGTGTTTTCTCAATGGTTTCCTTACGTTGATTGACATGGACATTAAAAca acttgttttttttcaccACTCATTGCAGACCATTCAAGATCGCCttgaaa aagatgaaatatCAGTCGATGAGTCAGCAACAGTAAGACACTTCTATGTT TTCATAGACAAAAAAACtaacttaagggaagaaattttggagggaattaa gtttggcggatggccgaaaaagtctTTTCAGAGGGAATTAAGTTTAGGGG ATggcttgaaaaatttaatttggcggatgaaggatattttttggccaaaa aacgcaattaaataaaaaaaaaattattttaagtcCTGAAATAGTGCACA TTCGGAGATTGAATACAATGATTTAGATTTAGTTGGAATTTTATTTGGCG GTTGGcgggaaaaattaaatttggtgggaacttaatttggcagatttggc tAAATCCACCAAATCCACCAAATCTTTTTTTCGcctaaatttcttccctt ataGTGTACATAAGATTAAGTTAAGATTCCTTTAAGACTTTGTGGGCTTT AAATCACCCAATCTTTTATGGATaaacacaaaaatactcacaaattggtg aaaataggaacattttgAACATGTAGACTGGTAGTATTTAGGGAGTTTTA AGGAGGTAAAGGGGAGCTAGATCCTCACTTAGTTTTCAACCAGGTCGATT TTATTAATTGCAATTTTCCAATAATGTCTCTGCTTATTCTGATTTCCACT TTTTAACTGAATCTCCCAAGTTTATGCGTTAGATATGTTTTCATTACACC ATTACACAGCCAAATTGAAGGCATTTCTCTTCGAAATTTTGTTAGATTAA GCGTATTTATTTTCACATACTTTAGAGGGAGCATTACATGAACTGGATTA AATTGTGGATAAATAGAGCAGTGGAAAATGTCGATTCCATAAAAAGTAAG TTTTAATCATCAGAAACTAAATCTTTTTAAAACTTACAGTTTTGTTATTC ATTTGAAACCTTTTTGTATGATAGGCTCCTTTTTTAAGGACAAGATTCAT TTCGATTTCGTTTAATCGCCGCCATATTTGTGATCTCCAGGTGAAATGGA CATACTGGAACACATGGAAAAGCTAAGGATGGGAAAGGTCAAACCACAAC CTCCCAAAGAAGTCAAGGtatttatcaagcttttcctgCCATCTTCGCTG GTAAAATCAAAATAGAATGCTTTCGACTGTGATTTTTCAAGACCATCTTT CTTAATTAATGGAAtgttttttgagtatttttgagAGAGAATGGTATTAA GTCGAcgagaaaaagtttttagtcTGAACAAAGGAATGGAATTCGATTCA CTCTTATTTCTCACTCATCGTTCTTATTCTCTTTTGGGGTGAAGAATCAT TTACttattctttcttttgtttcagcCTCTGAAGCCGATCCTGATCACCA GGGAAATGCTCCAGGTATGGAAATGAATAAAAGGTGTCATAGCCACGAGC AATTCGAACCTTATCGTACTTTTTTGAATCCTTCCGACAGGAAAAGTAGA GAATAACAAACTTCCTCGTATCCCTtctttaaagttttgaaatttattgt ttTGCATTTAGTTTATATCTTCGAGCCGAAATTTAACCCGTTTTCCCTTT GagaattttaaatgatttttttaaatgatttaatCTATGGATATGGCTTA TCAGCTAAATGGAGAGTATAGGAAAAACTTGATTGGTTAGCATTGTACAC AACTCCTATTATAGCGATAAAGGAATTTCTCATTAATGTAATCTGAGTAT CAAATTTGTctgaattttcaatttgaatttgaaatcacTGTCTTTTTAGA ACAAGGTATTCGGTGCAGGATACAGGAACTTACCCACTATGTCACAAGAA GAATACTTCGAAAAAGAACTTCGTGAAGGGAAAATCGTCCAAGACTATAA GTAAGATTTCTTAACGTCTACCCTCTAATGGTAGAAAGTCAGCCTTCTCC TTTAAATCCTTCAGCCTAGATGGGTTTTCGACACAAAAAGAAAACTATCA TTCACGTTAACGTTGATATAACACTTTTCACTATCTTCTTTCTTTCCCCA GTAGCGAATACATTTAGTTATTGTGATAAAGAGGGATAAAATCCATTAAG AGGGGATAGGTGCCTAATAAATGGCCTCCCGTtttgctatttaaaaaaaa aaatctttttcacccCGATCCTCACTAGGACCCCCTTCATTTACCTTAGT ACCATTACTTCTTTACATTTTATTAGTTCTTAGTAATATTAGTAAAATTT CCCACCACTCCCTTCCCGTTATCAAGCACCTAGAGTAAAATGGTAATAAG cgataaaaaacttttcttcgtgTTTTCTTAGTTCAAAAAGTAAAGGAGGA GCTAGCGGGAGCACAGCGGAGGAAGAAAAGGACGAAGATAGAGACGAACA TGACGAAGAAAAACTGAAGAAAGCCAGAGAATGGGATGAGTGGAAAGACA GTGAGTGTTGGAATTCGAATTCTCTTCTATGGATCTAGAGTTAGCCTTGG AAAAATTCAATCCTCAAAAATAAcgaatattttttctttgttatacCTAA ACACGAAGTTGTCATTAACGGGACGAATGGGAAGAcagtaaaatttgaaa ttcgaactcTCCAGCAGATAAAGAAACTTTTCTTGCTCCAGTAGCCAAAG CACTATTACATTCGTaaagtttcaaatattttaatctGTGGATATGAAGG AATCTTCGGAATTTCAATCCTCGAATATATCCAAATACTTTTCTTTACTA CCCGAAGATGAAACTGCCAGCAGCGAAATAAATATTCGTCTCTTCTGTTT TTATCTCGGGGCCTTGGAATTCTAAACTAACTcgattttttcattctttg aatGTTGTTTGTTATATTGAGCTCTTTCTGTATTGATATAGGAGTATAAG TTGCCTTGATTTGAATAAACATATGAATATGAACAATTATCAACAAAagt aaaagtgaaaataatGAAGATCAGCCGGTGAATTGATGATGTTTTGAAGG GCTTTTGTAAGCATATAACCAAGCATAATTTGTGGCTCAGTCCGAATTTC CcgtatgtttttaaaataaagCAGTATAGACATAAGATACACTACAGAGG CTGATTCATTAGAAGAAAAATGGTGTTAAGGAGTTGTTTACATTTACATC ATTTACTTTATATTTCAATTCTTTACTTTCATGAAAAACTTATACTGTCA ATCTTTCTTACAGCTCATCGGAGAGGCGAAGGGAACAAGGAGAGGCACGG CTGATTTGATTGTGAGTAGGGTATGCtaaatagttttttattcattttta taacgtttttcatttagaaaatatactttaaaaactgaaaattctgaCAA ACTGTCGTGTTATTACTTTGTCCCATGTAAACACATGCGGATatttagaa aattgaattttatggACTGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061925TCONS_00061925Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061925-proteinTCONS_00061925-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1174442..1179513 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IGBP1immunoglobulin-binding protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.45 61.02 27.3 21.28 25.14 17.48 23.15 22.01 25.59 21.8 23.13 20.6 14.36 16.21 19.26 21.03 20.53 20.14 5.36 7.39 13.39 12.66 29.97 26.84 24.06 29.33 9.45 6.96 24 22.13