XLOC_038849 (gene) - C. hemisphaerica

Overview
NameXLOC_038849
Unique NameXLOC_038849
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:112496..121330-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038849 ID=XLOC_038849|Name=XLOC_038849|organism=Clytia hemisphaerica|type=gene|length=8835bp|location=Sequence derived from alignment at scaffold_361:112496..121330- (Clytia hemisphaerica)
CATAACAATGGTCGATCGCTCGTTCAAGATACCAGATTTCCAGATTTAGG
TATTTAAGTTACTGTTTTTAACTCTCATCTCAATTTTTTTAGTAAAACAA
TACAGTCTGTCATTCAAATATGTGTTATTTTTCTTTTGTGATGAATAATC
TTGTCCCTTGTGCCCCTTGGTTACTGCTGTGAGACCTTTTTTTAAAGTAT
AAATAAAGCCATCCAGGCGGTGTCAATCGAACTGTTCGATTATCGAACTA
ATCGAACTTAATCGAATCCTATCGAACGATAGCTGTTCGATTACCGAACC
CAATCGAACACCTATCGAACTGGGAAAACTTTTGTAAAGTTTGATGACTG
TTCGATTATACGATTATAGTTCGATCGCAGTAGTTCGATGAATACGATTG
AGGTTCGATCAGTTTGATTAAGATCAATGAAGTTCGATTGGTTCGATTAA
ATCAATTTATACCTTGCCGCCCAATTTTTTATTTATATTCCGAGGGCGTA
TTGGCGGCCGCCCACAGGCCATTCTCGCGGGCCATCCTATATCTATCCCA
TCGGATGGGACAAGCTGGAGCTTTTACAAGCTATTTGGTCGTATAATTTG
TAAAAAAAAAAAGATTTTCATCTTTATTACTTTCTTTAAAGAAAGAAGCA
TTCGGTGCCTGTGTTTTGATTAAACAACCTCGTAATTTTCTGAAAGGTAA
AGAAAAGTAGAATCAATCCGACACAACCAGTCAGTACCTTTAGCCAAATA
GACCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAG
AAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGATACAGT
AATTATGCATGGCTCTATCATTGTTTTTATGGGCTGGACTACATAATTAT
TCAACAGGACGTCCTCTTTGAAAAAAGGTCTATTAGGAACATTTTTCTTA
CTTTTACTAGTATTCCTAATTAGGAATCTTATTCCTAATTAGGAAGAAAT
ATTTAAAAGTTTAATATCTCTGAAACAAGCTACATTCGCAAATTCCAAGT
ATGACCAATAGATTCGGTATACCAAATATGATAACTGTGCAAAAAATTGA
AAAATTTCATTCGCGGATGGTGGAATTATTAACGCCCCAAAAAAATAATT
CCAAATTAGGAATTAAACGAACTGCTGCTTTTATTATCACGAAGAAAAAC
AGAAAGTGAGTTTCCCGCGTTTTATAAATAAGATGTCAATTTACTACTGG
GAGAAGTGAAGCTTTTTCTAGGGATTATAGCTCGGTCCCCCGAGCAAGTC
AATAGCTCAATCTTTCTTTCCCACCTAAATGGAATGATAAGAATCTTATG
AAGTACTTTTTAACGTGCGATTTTTTCTATTTTTGGAGAAAATCTAGGTA
TTTGCTTCATATTCCTAATTAGGAATTTTTTTCTTCCTAATTAGGTATAA
GATTCCTAATTAGGAATACTAGTAAAAGTAAGAAAAATGTTCCTAATTTG
GCTAAAGGTACTGACTGACAACCATCGAACCACATCAAACTTAAATCGAA
CTCATCAAACATCAATGGAACTTCATCGAACAAAGAAAACTCATCGAACT
AAATCGAACTTATCAAGAAATTTACATAAGGTTTGATAGCTGTTCGATCG
GGTTCGGTAATTGTACAGCTATCGTTCGATTTTGTTCGATAAAGTTCGAT
GGTTCGATGACGAAAATCAGTTCGATAGGGTTCGGTTGACACCGCCTGGA
TAAAGAGGGAATTGAATGACAAATTTTGGTTGGGTGATTTTGGCTGCTGC
ACGTTTTATTTTGTTTCAAACTTTCAAGTTTCAATTAATTGTCTTGTGAA
CTTGATTCAGGTGATATACCTTGTTGTTGCAAATACATCCTGTAGATGAC
TGATGTGATGTTGTTTTGTCTGAAAGCTTGATTTCCTAGTGTGACTAACT
GTCATTTATACTGTCAACTGCTCTAACTTGGGACGATACACCTTTCCCGT
AATTAAACTTCTCAGAAATGGCCCGGGAAAATGTGCGCTCCACCGTTGTG
CATAAAATTGTTTGGGAGGTAAACAAACGTGTTTTTGCCTGCGAGGGGTT
AGTAGGGAAAGTGGGTTTTCAGCTTCTAACTTTTGATAGAGATCTTCTTT
TGGCAAAAGATTTTCAGGGTGGTATAATATCATGAATAGATTGAACATAC
CAAAATTTGAGGGGATTTTGTTTGACAGAACTTAAAAAAAGCTCAAAAAA
CCAACTTTCCCTANGAGGGGATTTTGTTCGACAGAACTTAAAAAAAGCTC
AAAAAACCAACTTTCCCTAAGGAAACGCAGGCAAAAATGGGTTTGTTTAC
CTCCAGAGCCCAAACGGTGGAGAGCATCAAAATAATGCGCGCTCACTAGT
TTTACGAATTACAGGAAAGGTGTATTGGTAAATAGCACACTAAAAAATAC
AACTCTATAACAATATCTCTGTATCTTTCCTCTTTTTTTGCAAAAGTTTC
AGGGATAATGATAATTGAGTACTATCATAAAGCTAGAATCACTTTGTGTA
CTCTCTCTTGAGAAAACGATTGACAGATTAATTTTTTTTCACCTGTGAGG
GAGTTTGCTTTGCAGGTGTTCTGCGGGGATTGCTTTTTTTAACCCGGCTC
AATCCTCAAACCACAAAAAAATAGCAGACCATTTTGATCATTGTTTTGGG
AATTTTTAATTTTTCCTGACAGAATATCCTTTGTTTGATTCTCAAAATGA
TGACAGTACCGTTATAAATTTTGTTTGATCACAATCTAACAATTTACAAT
GCACAATCCGCAATCCATGTTTAAAATATATATCAATTCATGCATAATTG
AAATAAAAAAAATATTTATGCGAATTACGTTCGGTGAAACTCAATTATTT
TTAAAAACATCATTCATGTAAAATTATACAAATTTTAATTATATTCAACA
AAGCTCACATTGCGTTTTCCCAATTGTACCATGTTCCCTCTCTGTGTTCA
ATTCAAATTCAGTCACATCACAAGATTAATAGAAAGTAAAACCATGTACA
TATAGACCTTCTGTACACTTTCTCTTTCTTGAAGGCTTCCCCAATTTTAT
AGATCTGTCTTTGACGCCAGAAATTGTAGCAATAGAAATTTTGCTGCCTG
TTTTATTTACTACCGGGTGCACCACAAAAAAGTTTCTCTCTTTGAAACTA
ATTTTCTCGAAATCTAAAAGTTTTAAAAGAACCATTCTTATTTCATTGGA
AAGAAGAAAGATAGACTTAAATTTTGATGGGTTATTTATTAAATTTGATT
CATTAGATCAAAGGTTATGTCCAATTGAATAAAAATGTTACTTTCAGAAA
GTGCTCGAAAACGTTAAAACTCGACCTATCAAATTTTTACTTGAAATTTG
GCAATCGCAATAGCCTTTACATGATTAAGAGCATTTTTCATTAACTAAAC
ACAAATTTTGAAACTGAAGGGTCGAAAGGGTTCAAAATCTTCATCAAAAT
TAATTTGATTTAGTTTTACCGAAATTTTCCTCAGATTTTTGGTTCTAGAC
TGGNCCATACCATTATGATCCTCCATATTTGATGTATTTTTATGAATTCT
ACCAGATTTTTTGGCCTTTTTCGACGAATTTTCTTCCTTTCATTGAAATT
CAACCTTCCTTTANAAATTCTATGTAAGGCTGAATCTACCTCGAAACCCA
TATTTGACGTAGTCAGAAAAAACACATCATCTTTCTAATGAATATTTCGG
CCAACTGGCCTTTTTCAACATAAAAATGGATTTATTTGACAAGGTTTATA
TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAATAGGAATGGTTCTTTTAAAATTTTTAGATT
TCGAGAAAATTACTTTTAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTA
TTTTCCTTTTTTGCATTTAGAAAGAAATTATTAAATTTGATTACTTTTAT
TATTCGTAGTTTCATTGCATACTTATTTTCTTTGCATAAATTTACTGTTA
TGAAAAAAAAAGGAAAAAAGGTTTGTTTTGGAATTATGTTATGTAATCTT
ATGATCTTATGCTCGATGCATGAATCATACATCTTAAATTATTAGATTGT
GCATCTTAAATTACACCAACCCCAAAATGAGATGAATTATTTCGTTTCTA
TGCACCAGTTTACTTGTAAAAATCTGATAAATTAGATGGTGTTGTCATTA
AAAAACTATTGTTTGTAATAATTTGTTAATCAACAGACTGCTATGATAGA
CTTAACAACTACTGTAAGTTGGTTTAATGTCAACATACATCATCTACATT
AATCCCGACGACCTTCTTTAGAGACTACTCCTATCTCTTAAAAGAAGGGT
GTCAAAATATATTATTAATTCCAAAAAATTATCATTACATTCTGACCTAA
TGAATCACCATGGTCATGGATCGCACATATCTGCTTAGTCATGTTTAACA
TAGCTTTATTCCTGTTTTATAACCCAAAATAATTTGAAACCACAGGTGGT
CCTTCATATTGATTAGACCTTTAATTAACTCATAAAAATAATTAATTACT
GAAAATATTTTCTTAGTATATTGTAGTATCATTTATTGTGTTTTAAGCTA
ACATTATACCAAGACCGACCTGGATTCAAATCATTGGGTGTTAAAAGGTT
GTGGGCTGCTATTATAAGTGTTGTTGAACCTGACTGTTTAAAATTGATGC
GAAGACCTTATTATAAATTAATTATTTTCTCTCAAGGTTAACTATGAAAA
GGATTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGGGATATTTATCATC
TCGATCAAAGATATTCTTCTCAATGTTGAAGAGAACGGGTAAGTCATTTT
TTGTTTACTTTAAAGGGAACAAATTTTTGCAAAATCTTATGAATTTTTAG
CAAATTCTCAAAAGAAAAAGAACTCTGAAAAACTGATTTCTCAAAACATT
CGAAAAATCTCAAAAGGTTATGTAGAGAACTTTCAAATGGGTATAGCTGA
TTTCTTTTTTTAAATAATGCAAGATAATTCAAGTTTAATTATGAATTATT
GCTAAATTTTGGACTGAAATCAACCATGCATCATAACCTTTACTTGAATT
TTCAGTATAATAGTTTCTTTTTATTTGTAGATGTACAATGACCTGGATGT
ATGAATATCCAAAATATATTCCTGTTCCAATGGGTGTAGAGATCAAGAAT
AAGTTTCCAAAGTACAATCTCTTTGTATATGGGGAGGGAGCTTATGCACA
ACATCTTTTTGGTATGCGAGACAATATTCAACTGGATGGTGTCCCTGCTC
TATTTGTTCACGGCAACTCTGGTAGATACAAACAGGTTGGGGTCTTTCTA
AATGCTCTATAATTTTGATGTAAAAATCACTGTAATCTTTTCTATTCGAT
TCTTTTAACCTTTTGAAAATATTTTAGAAATCATACTGTTCTGGATGCTT
GCATGTGTGAAGTTCCTTTTACAGTCCTGTCAACTGTCTTTGCCCATTGA
GGATTCAGAAATATTGTTCTGGATGTCAATTAAGACTTGACAATAAATTC
CTCACATGAAAATAAACAATCTTCGTCAAAAGCATTGAATCCCCACCTTG
GGTCTGTCAGTAGTCCAACAAAATGCTATATTACCTCTTTGAATTTGATT
ATAGGTGCGTTCCCCTGGTTCTGTGTCATTGTCGAAATCCGAACGAAAAG
CATACCATTTCAACTACTTCAGTGTTGATTACGAAGAAGAATTTTCTGCT
TTATTTGGTGAATATCTTCACAAACAAACTTTGTTTCTCTCACATGTCAT
TGATCGTGTTTTTGAATGTTACCAAAGAACTGCAAACAAACCAACCTCTC
TGATTCTTATTGGACATTCAATGGGAGGCATGGTGATTCGTGGTTTGTTT
ACATTACCCCATTTCGACCACAATCAAATTAATACAGTAATCACCTTAGC
AACACCTCATTTGGAACCACCAATCAATCTAGATCCACGCATCAATGAAT
TCTATGATAAAGTTAATAGATATTGGATTGAGCATCAAAATAAAGTCGAG
AATTTGACTTTTTTATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTACG
AAGTGATTTATGTCTCTACAAAAGGTCAAGCCCAAACCATTTTACAACTT
TGACGACATCTTTACCAAGAATCTGGCTATCAAATGACCATCAATGCATC
GTGTGGTGTAATCAGTTGGTAAGAGCCCTCACCAGAACCTTTTTCAACAT
GATTGATCCTAAATCTAAACAAATCACCAACAACCATAAGAAGCGAACCA
AAATTTTGCTGCAAACTTTATTTTATGAGAAACAGAAGCACTTAAGAATC
ACGCTAGATTTCAATGAATGTAGCCCAATTGACTATATTAACAATAAAAT
TACATTAATTCGTAAAAGAGACTGTGTCAAAGTCAATATTTCAGAGAGTG
GACAAATAGTGGATGTTTGGTATCATAGCAACAAAATAGATTCATCTTTG
ATTCGATGTGATCCAAACCAAAAATGCAAAACTTTGAATTTTGCTACCCA
ACTTCCAGACGATTCTCAATTCATTTCAATCAAAACTGAAGCAAAAAATC
AATACTATTTAAACCCTCAGTATGGAGATCTTCATTTTTCAATCGGGAAG
ATATTGGACATTGTGAACAGGATTCAATTACCATTGTTAAATGGTCTGGA
TACTGATGTTTCCTTACCAACATCTTCTTTCTATCATGAAATCAATCTCC
ATGGATACTCTGCTACCTGGCAATGCTTCAAAGTAGAGATTCTAGGTGCT
AAAAAAAAAATAATTGATTCTCCTATCATCAAAATTGAAAACCCTGAGTC
CTCAGAGATTAACGTAAAATCATTTTCAAACAATGAGCTACATAAACTGG
ATTTGAAATTTTTTACGGTACCTACTGATGGAACATTGAAAATGTACATT
TGGAGTCGAAAAGAATTTGCAACAGTTCGAATTAAATTAACAATCGATTG
GGAATCAAGTTTAGGTCAGTTGACACGATTTCAGACACGGTCTATTGCAC
GTTACACACTTGTTTTGTACACCTTTCAAAAATGTAGCCAAAAATCTTCA
GTGCAATCGTTCGCAGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTCAT
ATTAGAACACCATCTAGATGGTATTGGAGTATTACATTACTTTTATCAGA
TTGTCTTTCCAGAAATGTACAGTTTTGTTGTTAGCATGTCTACGGTTTTC
TTATTGGACATTATTGGACAAATCTTATGGAAGGTTGTTAGAGGAATGAC
TTTTAGATACATATCAATTACCAATTCGAGAGCTTTAAAATTAATATGGT
GTTTAATCATTGTATTAATATCTTCAACAATCTATTATTCCTTTGGATCC
GTTTTTGTCCTCATCCCGTGTTTCATAGCCCACCTGATAACAGAATGCGT
TCAGCAATCAAACAAACGATCGGATCTTCTGGCATTTTTACCGACGACGC
TGGCAATATCAATTGTACCTTACATTGTCACTGTCAAGGATGTATTGCTT
GGGTTTCCCATACAATCGATTCGTTTAGGAAATATTGATCCGATAGCACT
GGGTTATGTACTTTATATGATTTCGTTCTCAACTGGATTCCAATTCACTT
TAGCACCACCGAAAATGGTAACTTATGTTTTGCCATTTATATTTGCGCCA
TTTATGTGCAAAGAACTAGTAAACTTTTATAATGTAGGGTATTTAGCCCT
TATTTGTATGGCAATTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTAGA
ATGATTTTAACATTTCAATTTCCTTGTACTACGGTTAATTGATTTTCCTT
AAGGGAACGTTTATTTCCCCTTTCAAAAATCTGCAGCCTAAAGAGGAGGA
GCCAGAAATCTTTTTTCACGTTGTATGTCGAGGGTTTTAACTCGCTAAAT
TGAGAAAGTTCAGCATAAAAAAACACAAGGTTGGCTATATTCCAAACAGA
TAAGTTGCATCTTTTAGGTGTACAAGTTTTTGCATGCAGAAACTTTCGCG
CAGTCGAATTATCCCAAAAGTTTTATATATTTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061969TCONS_00061969Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061969-proteinTCONS_00061969-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:112496..121330 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.28	8.99	3.09	2.32	6.18	4.18	4.42	5.04	2.64	3.29	3.14	2.37	2.27	2.34	3.02	4	3.48	3.89	1.38	1.3	2.58	2.36	8.98	8.52	3.92	4.58	1.94	1.51	5.82	6.52