XLOC_038850 (gene) - C. hemisphaerica

Overview
NameXLOC_038850
Unique NameXLOC_038850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:136908..143303-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038850 ID=XLOC_038850|Name=XLOC_038850|organism=Clytia hemisphaerica|type=gene|length=6396bp|location=Sequence derived from alignment at scaffold_361:136908..143303- (Clytia hemisphaerica)
AAATTTAAGAGATTACTTCACGGATTTTGGAAGCCCGGGTAGAGGATTTT CAACCAAAGATTTACTGAAAATAAGCCTTACACCAAGTTAAGGTAATTAT CGAAACAGTTTAATGGGTTGTGTACGGGAAACATATTTGTGTAATAGTGA TTGGAGTTTGCGGTGGGAGTGTTTTTGCATGATGCAAATTAGAGGATGTA AATTTAGGTCCATGCAGTTTCGCAAGTCGGTAGGTGTCCTTTTAAATGAA GCTTCTTTATAAGATGTTTAATTTCTATTGATCCGATGGCAATTAAATAA ATCCGACCGCTTTAATTGTCAAATTTTCTGTCAAGATTAAGAAATGTTAT AAGAATTGTACTGAGGTTATTAATTCATAAAGTGACTCAGATTAGCCCAA AAAAAAAGATCTTACCAAGAAAACATTTAAGTCATGATAAGTTATGATTC GAATGAGAAAAATTTTATAAGAATAGTTGCCAAGATATAGATAGATTTCT CCCCGGAACCGGTAAACAGTTTCTTACAAAAAAACACGAGGATTTCTTTG AAAGAAGAGTACGTCATCCCCCTTTCGAAACATAATGAATAGCTTCGTGT TTTCAAGCATTTTGACATCGAGAAGAGGAAGATAGTATCTGTCAGCACAA CTATACTCAGTCAAGAACCATTGACACACAAACACTTGGTATAAATGTTG AAGCAGAGTTAGTTAGTTGAATATGTTTTTACAGAAAAATGAAAACTCAG ATTTCATAACAGAAGAAGAATTGACACAGTGAATTTGTTGACTCAGCTAC AACAACTTGTGGAGGTCTATAAAGTCAATAAAAAAATATCAATTCTAGCT CAGATAGCACAAAAGCTGACATTTTGAGCAGGAGCTGGTTAACATATCGT TCCACAATAAGCATAAGATAACAGGAAGAGTGCTTAATCTAATCTCAGTC CAGGAATATATATTGACGCCTTGTTTTTAAGCATGGGCATAACATCAACA TGACAAGGAAGTTGCGGTGAAAAGAAAACAACAAATATATAAAGAAAATA ATACATCAGAGATTATTTGGTTGAGATTGAGTCAACATGGGTCTCGTGGA AAGTAAGTACCATTTTAATTCCTTCCAAAAAAGTTATATGCTTGCCGATC AGCAAAATATGTACGCAAGTTACTAAAACTTACAACCCCAGTATTCACTT CCAACAAATTAAGTAACAAGCTCATTACTGTATTATATTTTTATTGTCTG GGTATAGTAATAAGCTAAAGTTTGAATTTTTTGGAATAAAGGGGATAATT TAAAGCCTTCATGGCCAAAATTTGAAATTCAAACTGCTTTGTTGGCCCTT TTGCCAAGACTGATTCTACTTAGCGTTTGAGTTATGGAGACTCGGCTGTC CTGGTTTTGTTTCCGTATCATATTTAAGAGTGATAACCGCTTGGTTTATT TCAGTTTTTTTTTAATTTCAGCATTGATTATTGTGTTCGGTGTTCTATGT GGCTTCTTCTTGATCCTCCTGGTCCTTATTTTATGGAAATATGTGAAAAA CATACGAAAAAGCAAAGATGGTAAATTTTACAAAGGCGTGAAGACTTTCC CATCCATGGATGAAGATGATGGTGTGGATGTGGGACCAAGAGTGGAGTGG AATTTCGTGGCTCCACAGCTGCCAGTGGAACCGTATGACCCCAAGGTGAG AAATCATTATCATGTTATTGAATGAGTAGTAACCTATATAGTTCGATCCC TTACTGTTTGCTTCAAGTGGCTTACCAGGACTTTCTTAAATTGTCATAAT TATCTCCTAAAACAACAGTTTATTGATATTGAGCGAAAAAAGAAGTTACA GATTGGAAATCTATAGAGGCGATCCCTTACGCAAATCGAACGGTTGCTTC CATAATGGCGGAATTTGCGTAACTTAACAAAGCATGCCTCTAAACTGCAT CTTTTTTAGGCTTTGGACGATCCAAAACTTACACCAAGTTCACGTCGTAA AGACTACTCCAAAAAACCAGTCAACCCGAAGATCAGGAAACTAAAAAAGA CAAAAAACATGTCCCGCTCTCTGAACTCTCTGGACGTGATCGGTAAAAGC GAAGAGATCGATCTTGGCAGTGATCATTTGAGTATAACTACTGATGAGAC TATGAATCGTAGTAGAAGGAGGTCTTATGGTAGTGACATCTCGGACGTTT CTTGTACGTCAGCAAGATGTATCAAACAAGAGAAAATTAACACACAAATG ATGGAGAGTTTGAGGAATGGAAAACGCAAAGGTGAGTTTTGAATGTTGTT TTAATGTTCATTTAACGTCATTTGGATGTCCACAATGTGTCCGTAAAAAA AGCAGAACAGAATTTATATAAATAAAAATCCTGGTCATTTTTGTGGCTTT TTTTCAATGTCACGATCAACGCTTACCTGGTTTTCCAAATATTGGGAGCG TACGTGATATTGGTACATCGGTATTGGTCTTTTTTTAGATCTGTAAATCG GTATTACGGAAAACAATAAATCAATATTTCAAGAGCATCTCGGTATCGGT AAAAGACTCATTTTTATATCGGTATTTCGGTATTTTCGGTCTACTATCGG TATCAAAGATCATGTGAAATCAAAAAATCATGTTTCATCATTGAAATTTT TAAGAGATACAAGGGAAAGGGAGTCTAGAAAATCTGCATATGAATGTTGA TACAAAATATTGAAATCAATCGGTATCGGCATTTGGGCGAAAAAGTTATC GGTATATCGGTAATCGGGGTAAAAAGTGCCGTTGTGCCATAAGTGATCGG TATAATGAAGTGCCGTACGCCCCCACTATATTGATTGCTATGGCATTTGA TTCATAGAGGAGTCCATATAAAAGTAACACGTTATGGGATTTAATTACCT TGGGAATGGTTTCAAACCGAGGTAGTTGTTGTACTTAAAATAATATTACC TTGAGAATTGAATATCTATTGCTAGAACACAGAAATTCCATCTTATCTCA ATATTTTGAACACCAATGAGATAATAATGAGTTTTAAGGATTTCAATTAA TCTGTCCCGCTTTTTCCGGACACACTGTAAGGTAGCTAATAGAACTCCCC CTAAGCAAAGGAGGGAAATAAAAGGAAGCTCCCAAAAACGCCCTTCCTAC TTGCCAAAGAATCCGATAAATTGTACTTAAGTCATCATCACTGCCAATTG AAACTAAAGATGGTGGGTTAGGAGTGCAATTAAGCGATTAAATAAAACAA AGTTTCATTGAACAACATAAATCGTAATTTGTAATATGTCGTTCTTTGAT AGTTAGGGTTAGGGTTAGAGATTGTCGTTCTCTTTGTCGCTTTTTAATAG TTATTTGTCCTTCTTTTTAGATGGTCTGGAAACACGTTACATGAACAGGC TCTTAATATCCGCTCTGACAAATTAATGAGGGAATTACTATCATCTTTAA AAGACAGTTAACATCCTTTAATGATTCTAGTTTCCAGACTTCCTGGGGTT TCGTTTAGCTCATTGACTTCCAAGCCTGAAGCGCTAGAGACGAGACTCCT GGATGGGAAATGAACCCACTTATTTCCCATCTAGAACACCCGCGCATAGT TTTTACACAAACGTCGGATTAAAACTAAAATCTATTGCTATATTTCAAAA AATGTAGTCCTCCAAAACAAAGGAACCGGTAGATACAATCCATTGTCTTG ATTACGGCGCGTTTTGGATGGGAAATAAGTAGCTTCAATTTCTCTTGCCT GAGAAGAGTTAAAGTTTCGCCTCTAACCCTTAGCGCTTTACACTTCTGAA ACCCTTCCCACCCTCCGTACAAAGATGCGATGATTTCTTTTTGTGATTAT GATGAGAACAAAACGTATTTGAAGGCAATACAAGGGGAGAATACTTGATA GGCCAAGATTTATTTGGACACTTTCAATAAAAATAATCCTTATTTTGTTT CCTTATTAGATTCGACGATGTCAATTAGCCCTAAATACAATAACGGTCGA CTATCGTTGGGAAATGTTGGTCGAAACTCCACAGATGGTGGTCCAATAAA GTCTCCTCTTGCAAACGAACCAGGTCGAATGTCTTTAGATATTGGGAGAA ACTCACCTCTCGTGAAAAAAAAGTGGATCTCATTAGACGATGCACCGATG AGCGCCGATAACCTTTCAGAATATGGTTCAGATTTTGGTGGATCTTCCAT AGCACTGGATGAGTCTAAATCAGGATCCTCAAATATCAGGAGACGTTTCG CTCAAACCAGAAACAGTAATCGAAGCTTCGAATATAAAATTGTCGGGAAT TTAATCGTATCGGTGGAATATAAAGAATCAGATAATAAACTTACTTTATG GATTCATCGTGCGTCCGGCTTAGGTGGTGACCGTAGGGAAGATCCGGAAA TCAGTTCGTTTGTCCGGATGTACCTGATACCGGGCAAGAAACAAAAACAA GAGAGTTCAGTAATACGCGGTGCGAAAGATCCACATTATGAAGAAACTTT TACTTTTAATAACATTATACCGAGTGAACTGTCAGCACAGAAATTACGAT TTAAAGTGTATAATTCACCTTCATTCAGCGTCAAAAACGAGCTGTTAGGA GAAGCAAATATTTTTTTGAGCACTTTGAAAAGCGATGATAAAGAAGTTTT CCATTTGGATTTACTGAAGNGGGAGAAGGAAATATTTTTTTGAGCACTTT GAAAAGCGATGATAAAGAAGTTTTCCATTTGGATTTACTGAAGAAAAAGT CGAAGGTAGGCTCATATTTGAATAAATGAAAACAGCCGATAGACAGTCTT AAAGTCCTGGATCACGAGGCTATTAACGTTTAATATCCACTCTACCTAAT TACTAAGTCCTCACTCTGTCTCACTTAACATGATGTCAATAAATACCTAT CGATATTTTGTTGAAGTTTAAAGGGAGATTTTTCAATTCAAACGATACAT CAACTTCGTTTGTAAGATGTTTCTCATTGACTTTATCATAATAGATCATA GCGTAAACATTGGTTGAGGGCCAGCGTGGGAAAAATTAAACATGGTGCAA AAACAATAAATGGGCGGAGGCATGTTATGGGGTTGTTGTCACATAAACTT TTAACATAGAACATATGTTACTTTTCCCAATTTCTCAAAAATGTTCAAAC ACAAATTTGTGCGGGATAAGGAAATTTCGATTAATGGTGTTAAGGTTTAT AAGATGTTGCTAACTAAAGGGGTCATAAAACTTATTCGAGATAAGGAGAC ATTCGAGTTAAAGGGACTCCACTATATAGGCAAACATACATAAATACCTT TTACCAACTCTCTATCTTCTCGTTTGCAGATTTCTTCAGCTTCCGTAGAA ATCAGTCTTTGTCACCAAGGAACATACTCCAAACTGGAAGTCATCATCCA CCAAGCAAAAAATCTAGTGCGAAAATCAAACGCTATGATCAGTAAGTTAA AGGGAACAAATTTTAGACTTAGCTTTCTCACTTTCAATTATAAGCTTTTT ATTTTTTAACCAATAACTGGTTAGGCTGCTGGCATCCACTAACGGATTCG TGCTCCTTATTTTGTAGAGGTCTGGGATTCAGACTAATAACTGGATAGCC TTTCTCTCCAAAAATCGGTAATTCGAATAGAATCAAAGCCTCTGCCAGGA GAAATCATCCTTCAAGACAGATCGTCTTTGAAAGACAAAACTTCCTCATC TTATTGGTGGTTCGGAGGGTTTCTATGTCATTTTTTCTTTAACAGATCCA TACGCCAAGGTCTCGTTTTACAAAGACGGCTCCGTGGAAACAAAAGAAAC TACACATCAGACAAACGAACGAAATCCCATATTCAATGAATCGCTCGATT TCAACGCCAACACAGACGTAGGATCACCATTGACTACGTATTCTTTAGTC GTTACCATAATGCATCACTCCATATTACGGAAAGACAGTCCCATTGGTCA CGTGATATTTACGTTGAACTCACCGCAAGAAACAGCGGAAAAACATTTCA AAATGGCGGAAAATGACCCGCATCGTCGGATCACAGAATGGCACAAGCTA ATAGATCCGGATGATGTGTGAAAACGATTTTGGAATTTGGTTAACCATTT TTATCATGTTTCTCGGGATGAAAATTATCTCAAATTCAAGAAATGAAAAA ATAAGTTTGGATAGAATTCTTTAAATTTCTTACCGGCAACTTACCAATAA AATATCGTCTAGTGGGTTGTACAGCATGGTAGAGTCTCATTTTTTTTCCA GTTGTTATATTTCCTCATGATTGGTTAGTATGTAATTATTGTTTGTATTC AATTGTTAATTAATCTATCTGAAAAATAAAATCAATTTTGGATTCAAATG TGAATAGTCTTATGAGGTAAAAAGATACAAAAGATTATAATTAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061971TCONS_00061971Clytia hemisphaericatranscript
TCONS_00061970TCONS_00061970Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061970-proteinTCONS_00061970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:136908..143303 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.1 0.02 0.19 2.13 1.65 11.56 13.27 21.53 27.86 5.53 21.09 16.25 13.27 5.11 5.94 3.15 3.96 15.03 18.05 1.03 1.03 1.79 1.72 4.18 6.28 1.68 0.8 0.49 0.52