XLOC_039085 (gene) - C. hemisphaerica

Overview
NameXLOC_039085
Unique NameXLOC_039085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:46419..52777+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039085 ID=XLOC_039085|Name=XLOC_039085|organism=Clytia hemisphaerica|type=gene|length=6359bp|location=Sequence derived from alignment at scaffold_364:46419..52777+ (Clytia hemisphaerica)
ATTAGTTTATAGGGTGTAATTAAAAatgtattgaaaaattgaataatgaT GTTACCAAATTGAATTCAAAAGATGAATATTGGGGGCTATTCGTAAGTTT TGTTACGTTTCATTTCTTTGAAGAaatttagttttagtttttataaTTAT TCCCTCTATTTTGGTAACTATCACAACATATGGGAAATATTAATTAATAA TAGtccttttctttttcaccaTTCAACATAAAACTAACAAAACTTATTAA TTAAGAGGTCCCCCAAAATATATTCCTACTGTGATTTGTAGAGCTTTCAG TAAAGAACTGGCAAAGGAACAACTTCAAGACATTAAACGTAAAACCAAAG CAGAACAAATtatcagaaaacaaaaaatcaagcatttatcaaaccaaaca aatgagTTTCGAAGGTATTTTTTCCTCATTATCTAAAAACACGTTTTATT GTAGATTCTTTCAATCGTACTGTATGGAAATGATTCTCCGAGCGATTTGA AGTACCTGAAAATTCTTTAAACGCGGGTTTAAACGGTATTGAGAGCAGTC TATAGCGATCTAATTTTTGTTGTAAATCGGCCTTCAGACCTTTtagaaaa tatgattttgaaCGGTCCTGGCTGCACGTAGATGCTCATGGCTGCTCGTT AGACCAGTCCTGGCCGTTGGTTACACTTGTTCTAGACCACTCGTTAGTCT TTGTTAGTAGCGATTACATCAAACAATTTGTTATAAAAGGATGGGACCGA GCACATAGAACTGATCTCGTAGCAGCCTTTTGGTAAAGTTACACAGTTCA TTACCAGCCCTAANAAGCACATGGAACTGATCTCGTAGCAGCCTTTGGGT AAAGTTATACAGTTCATTACCAGCCCTCATAAGATCGTCTAAAAACCGGT ccgattttcaggtacttaaaaTTGCTTATGGAGTCACATACAACAGACTA TTTCACTTGCATTCAAGCTGGTGTTATTATTATCATATCACCAGGATTTC AAATtaacatttttcttacttttcaaGGAAACATGAAGAGAAGAAGAAAG TTCACGAGGGCGACGAAGAAAAGAGAAGattgagaattttgaaaatgcGT AAAATTAGACAAGATTCTGCTACTGAAAAATTCCAACGCAAACCTGAGAA AAAAACACCCATTGTAAAACCTGAAGGTAAAGGAGTTCTGTGCTCAAATC GAGTTTCTTTAACATGAGCTTTTTTTATCGCTTAGGAAAATATGGTaggt ttttttatagaaaaaactgGAACGTAGGGCTTTGTGAAGTGAGGTTATAT TTTCAAGTTCAATAAGTAGATCGCCCTTTTTTCATTGTAGCCAAACCATC ATCATTGAAAGATGGGAATTATAATGTTGCTGGACACGTGATCGAAATAA GAAATGGTGTTCGTGTACCATCAGCTAATGGACGTCGAAACACAGCACAA GAGCCAGAGCAGAACAATCTCGTTCACGTGCAtcagcaaaaattccaaaa cacAGTCTACCAACCTGACTCATACCTCAATCATCACTTGAAAAACTTAT TTGGCGATGATAGAATCACTGAGAAGCAATACTCAAATAGACCAGTACCG TCACAACAAAACATCCCACCTTCTTTACCTAACCATCATCCCGATTCAAT GAATATTTCCTCCTCTGGTACCACTAGTACCAACCAAGACATTTTGTTTA TCGACCGAAAATCACCCACTGACAGTTTATGCAGCAATGATAGTCTCCAT GAATCACCTTTNATGATAGAATCACTGAGAAGCAATACTCAAATAGACCA GTACCGTCACAACAAAACATCCCACCTTCTTTACCTAACCATCATCCCGA TTCAATGAATATTTCCTCCTCTGGTACCACTAGTGCCAACCAAGACATTT TGTTTATCGACCGAAAATCACCCACTGACAGTTTATGCAGCAATGATAGT CTCCATGAATCaccttttgaacaaaaattgcttCGTAGTAGTTTGAAAGG ATCCTCAGCATTAAAAATGGCTTCTTCATCACGAAAAGTAACTTTTTCAG ATAGTGTCGAATTTAATGATGGTGATGTCAAACCAGTGTTTACTGCAATG TCAGCTAGAGTTCCTTTATACCAACGTCGCGTCGAGAATACTAAACCAGA ACCTTCTACACAAATTACTCCATCGCCAAGCTTTACCAAAGTTGAAACGC CCTCAATTACTACTGAACAGTTACTGGACCAATTAAGACAAGATGCTCTA TTGCCTAAATATCCCTCAAACGAGGATTTCTGTTATCCTGACAACGTTCC TATAGCCAATCAACCTTCAGAAAAGGCCATGATTACAGACCATTCACCCA ATACTCAAATCAACGCCATTGAAAATTCATCCAACAATGATACAAGTTTC GCAGATTCACTCATTGATAGTATCGAATCTGATGATACAGAAGAGCCTGA TAAGCCACAAGTGCCAATAATCTCTTCAGCTTCACAATCAACAAACGTCA CCACAAATACGATCTCACCACCACCTTCAGTTACTTACGTTCCCAGTCAC ACCACGCTATCGTATGTGCCGAACTTTGTACCTCGAAACACAGCAACAAT CACAAATCCATATCCTGGAAAgtcaaatattttcacaccttctCGACCCT CAAACTATGTTACCAAGCAAGAAAATCTAAACAATCCTACCACGACAAGC ACCACTTCACATAAACAAGTGGACGATCAATTTCGCAATGAAAGCTACAG TCAACCTCAACAGAAAACCGATACTAATACTATTGAAAAGTATCAAATGA AATCACTTGGGAATAAATATGATCAATCGATGCAAAATCATAGAGCTTTC GAACAGCCACCGTTTTCAACTCCAGTTGCTAAAAATACAACTCATTCAGA CCAATTTTCACATCAAAGTCATCAGAACTATTTCTCCTATGTTAATCACA ATCCAGTTCATAATTCGAATTCCAATGTTATTAAAATTCACTCAGATACT GTTAAACCTTATCTTTCCGATCTCTTACTCGAAGATCGAAACAATATTTC TGAAAAGCAATTTGAAAAGCAAAGCTATTCAGATGATGACAATGATAATG ATGAGCCAGTGTTTGACCAAGAACTAGATACTCAAGAAGACGAGTTCTTT AAAACCATAGAAGCAAGTTTAGCGAGTGTAACTTTTAATAGTGTCAATAA TAATAAAGAGAAACCTACACAGGACGAAATGAACaaaaggccaaaaaata agCCGCACGGCGAAAAAGAATCAGATTCTCACATAGAATCACACATAATT CCGACAGACAGTGAGAAGATTTCTACAGCTGTGAAAGATGGTACTTCTAT CCCTGTTCGAGTACATTCAGGGAACGTCCGCAGAGGTCGCATTATAGTGA GCGCTAATGAAAAGAAAAGGAGAACAGTTAGTCATTTCTCACCACATCCT CCACCAATCTCCAAAAATGAAAGTAAAGTAGATTTTAAGTCTACCTCAGC TCCAAAGAAAACCAACAAAGAGACTACACAATCTAAGAAACATCCAAGTT CTCCTTCTACCAACGCTAAGAAGACACCAACTAAGAGAAACTCTTTCAGT TCAGGTCACCACATGCGTCAAGTCTATTCACCACCCACTACAACGACGCT GAATAAATATTCACCACGCTCGAAAACAACCCCAAGTAAAGACACCAACA AACCTTACCGCGGTACATCTCCAAAATCAAAGCCGGTTCAAAAGCAATCA TCCTTCACAATTACAAAGAGAGATCAtaacaacaattttttaataaataa caacaataataacATTGCGTATTATAACGATCATGTGAAACAAAAACAAC CCTCGCCTCAAACACCTCGGAAAAATAGTGATTATTTATCAAAACAGAAC CGTATAGCACTCGACAAAACCCCAACAGACGAAGAAATCAATAAACTATG GGCAAATGTACGGAACTGCTTAAGTACGGAAGCACCCGAGCAAGCTTATT CCGATACTGCATTCATAGCACCAAAAAGGGTCCATCACCAGCGTACTTTC TCCGGTTCTCTTGTGCGGCGCGGCAGTAATGACTCCTCTTTATACCAAGG TGGTGGAAATCACCATCAAGCCACAAGCAATCGAAGATACGGTTCCCATG AAGCATTAAATCGACCCAACTCCAATTCCAGCTCTAGTTCAAGTGCGTCT AGTTTTTCCAACCGACACGCTCTTTTACCACAGAGATCGAATCGAATTTT GTCTCCGAAACTGGTGATCGACAGAAACAGTAACTTGAGCAATAACAGTA ACACGTATTTTACCAGAAAGAAAGATCACGCGCTTTCTTCACACCATAAG AAAGATAAAGAAGGTAAGACTTCTTCATTTTGCTtgaatttctttgtatt ttctaaTATAGACGTATTGTCTGTATTAAGAAGGGGAATTCTGTTAATTA TTGTCAACTTTCCTTACTTATGTCCTTCCCATAGGGGCAGTTTGGGATTA TTACAATGTATTTTCCTTTTAAAGTGTATATTCAGTCTTTTTCAGGGTTT AAGAAACGTAAATACCTTGAGAACCGGCATTTAATGTTTGGGAATGCTAA GAAATCATTTTGTCCCGCACTATCAACTTGGTTACAACTTTCCAGTCTCa ccttttttatcattttgcttTACACATAGTTACGGAAAGTATGGCAACAT TTTTAGCGTTAGAAGAGCTTTGCAATGAACAATCTCTGACACCACGACAA ACGGAAGCTGTCTTCAAAGTCTCCAAAAGTTTGATAAAGAAACAAATGCA TGCAGAGGAATCCACTAAAGGTaacgtcttcatttttttcttattatcaA TAATAGTCAAATGATCAAAAAAAGCTGTCgagtgttttcaaaaaaagctg tCGAGTGTTTTGAACAAGTTTAACAGGTTGACAGTCATTGGCTAAAAGGA TAATcggctatttttcattttcatgaagAAAACTTTCACCATAATGTTGC ATTGCAattaaaagttatcaaaaaatagatgtagaaattttcttttctgt gATATGACGTTGATTTTTCACTTCATTTGCAGTCGAGATAATAACGTCAA AAACCTGTTGACATTGTCGGAATGGCTTGATTTTGAAATCGCCTGAATCT ATTTTAGCTATAACTGTAAATTTCCTAGATATGGTGTTGACGAGActttt tctcagaaatggctGCTCTATCTCATTCCTCCTAACTAAAAAGAATCTAT TTTTCATAAAACCTTTAAACGTAAAACGTTTTGACTTTCAAGTAAACATT CCATTCCTAAAAAAATCAATTGACGTATCCACGAAACATCAAGCTTTTGA TTGGTCATCTctccatttttttcaattcatcgtTCTCTTTGCAGGACTGT CAGCACTGTCAATAGAAGAACGTAAAGTGATGGACTCTCTTGATCGAATC AACGATAAACTAAAGAGTAAGTTCTCAACTTCATTTGAGCTAGAATCTAG GAATGTCTGTGTGTTTGTGTGTATGTTCCAAggctttggggcagcctgga gacttcaaaaattatcggatttggctgaaatttggcacacttgatccttg ggtgaatatctggggtgttttttttcatttttcaaaaatctcgatttttg agtttttaagttttaaagctagtttgttttgctacaaTCGGGTCTTTGAA TAATCTGAAGCTACTGAAGTTGAGTCCAGTGCGTTGCGCAAGTTCGACTA TTTTTCATAGTAGGGTTTAAGAAAAACATCATGAGATGTCAAAAGGGTGA TGATTTTATCAAGGGTAAGCTGGGGGAAGAATCAAATCAACGCTGAATAG AGTCTGACAAAACTATATTTTTTAGCATATTTATCATTTCGTTATTTCTA GGGCAAGACGAGTTGCAAAGAACATTAAGTGCAAAAGGGAGGTGATGTAT ACTTAAAACTGAgggctaaaaatcaatcaatcaattaatcaattttatca aattttattattgtgCATATTGTAAATAATCACAACAGAATTtagtatta ttattatcattttattcaaaaaattaatttattctaattgaagaaaatct gaaaacaattatttaaacaagaagcccaagggcatgaaggcccagcatta aaagttttgtttctaaataagagtgataaagTTTGCTTAAAATCATCAAT ctaaatttacaagcttttttatattgaattggcacgaatgtggagcaaca TTGGTCTGAAAgaggaagagaaaaacatttttttgcttatattagcacaa tataacaaactgatatgaaacatgtgtctaacatgaaacgggaacactta tttaTGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062372TCONS_00062372Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062372-proteinTCONS_00062372-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:46419..52777 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.62 2.49 1.22 0.73 19.91 14.8 13.01 14.03 3.71 7.15 7.07 3.12 3.13 3.21 2.16 3.81 3.47 3.37 3.25 2.89 2.13 2.01 2.64 3.68 11.56 12.04 4.66 5.57 4.25 3.78