XLOC_039961 (gene) - C. hemisphaerica

Overview
NameXLOC_039961
Unique NameXLOC_039961
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_4:108639..117168-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039961 ID=XLOC_039961|Name=XLOC_039961|organism=Clytia hemisphaerica|type=gene|length=8530bp|location=Sequence derived from alignment at scaffold_4:108639..117168- (Clytia hemisphaerica)
AGGATATTATTATACCAACGAAACCTTGTGGTTACTTCAATGGCCTTCCC ATATTGAATTATGGTGAAAAAATGACGAACGAGGAAATGTGCAAACTTCT TCTTCATCCTAATTTAAACCACGAATTGATTTCCCATAAGGTAAGTGATG AATTGATAACTTTGTATATTCCAAAGTACAGACATAGTATATGTGTTAAA TGCACAACCAGGTAGATCCATAAAAGTATCGCTTGGTGGACTTGTCTTAG TGACATATTACATCATGTATTGGATGTCAAATGATGTATGCATGTTTTAT TTTCACTGTGCAGCTATTATAAATTATCCGAAGAAAAAAGTTAGTGTTTG TCTCGGGAAAAGTTGCTACTGTCGAAAGAAAAAGATGGTATTTAAAAGCA TTTTGGCGCGCTATAGTCTGTGTCCAAAAACTTCAAAATCTTCGGATTTT CCTAGGAGTCTAGAGACGAGTTTCTCGCTACTTCTACAATTCTTTTTCAA ATCGTTGAAATAATGAAATCGAGCCAACCGAAGTGCAATACACACGTTTG ATTATTAGAATTTTACTTAACAATAACATCCACCAATTCTAAAAATATAC TTCACCCTGCTTTTTTTCAAATATCAACTCACTTTGCAAATTTAAATAAA TTTGACGCCACGCCACACCTTTCCCAGCTTTTTTTTGTCAAGTAATAAAA CCCCTTCTTCTGTTTAAGGTGCCTATCAGATGTCAGAAAAATATGACCTT CATTGTTAACCTGAATGCACTCAACAATCCAAAAGACATAACTGCCGACG ATAATGGTGCCTACATCAACGGTTTTGGTAGAGATATTAATATCCATACT ATTATCACTGAAAACAAAGTCATCATTGATGAAGAGGGAGACGAAGGAGA TAGATTCATCTTAACGAAATACAATGGCACCAACAAAGCATGTCCTGATT TTCACAGAAAGATCATTCGATTGAAAATTCCTAATCAGGCAACTTATTTC CAATATTGCTTAGTCAAGTACAATTTTGACGGGAATGAGAAGCAATTCAC TGTGAAAGCCCATGGACATTCCAAAAACAGGGTTGCGTCATTTAAACAAA CTACCACCAGTATGAGAGAAGTTATAAAAACAACGGCGAAAGTCAATAAA CCCTCAGAATCTATAAGGCAGATCAGAAAAAACACTGGAGGAACGTTGAA TATTGATTCGTCATCTCAAAATCCCCGGAATATAATGCAGGTTAAGAACT TTCGGAGAGATGTCTCTTCTACTACTAGCAAATCTGATAAAGATTTTCTT GCTGATTTGATGAAGGAATGCAAAAGAACAATGAATACTGACGATGAGAT ATTTATCAGGCGTGTTGAAGGAGCCCCAGAGCCAATTTGCCTTATCGGAA CTGAGGCGGCCTTTAAGGATATTGAGAGATTTTGCGTAAAGATGCCATAT GGGCTCAATTCAGTTTTGACTATAGATCCAACCTTTAATTTTGGCGGTTT TTTCTTCACNCAATTCAGTTTTGACTATAGATCCAACCTTTAATTTTGGA GGTTTTTTCTTCACCCCGACAACCTATAAGAATATGGCCGTGTTACGGGC TGACACAAATCAACCAAAAATTGATATGGGACCTGCCCTCATTCACTATC GAAAAGTATTTTCGACTTATCATTATTTTGCGTCCAGCTTGGTCAGCATC AACCAAGAGATGTCAGAGTTAAAATGCTTTGGCACGGATGGAGAAACTGC CTTATCCGATGCTTTCGCCAAAACTTTTCCCCTTTCTGACCAATTGAGGT GCTTCATTCACTCGAGAAAGAATGTTGAACAAAAACTTACTGACTTTGGC TTATCAAGCTGCAAATCAACGATCGTAGAAGACATATGTGACCCTCCAAA CGATTTGGTCGTGCTCGTGCCGCTTTCCGACTGGTTAATTGTGCGAGTAA AAGTTGAAAAAAGCGGCCAGAAGACCGCACAGTACCGTATGGTCCGTGCG TACAAAACGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTAGTGACCGATC GAGTGCGTTTGAATGGATTTTTAGAAAAGATTTTTGGATGATTTCTGGCC GATACAAAGGTATAATTTTACCGCACGGTAAATCATTTCGCCGCTTTTTT ACCGCCCATATTATCGATCTGTCCGCACCAAGACCGGTCTCATTTTTAAT GTACTCCAAATCGCTTGGGGGGTCACATATTTGGAAAGACGGAAGGCACG CATAGGTAATTTTAGCTTTGTTTTCTTGAGTAAATCTTTAAAGATATTTC TTTGTAGGTAATGGTTTAAGGGTTGATGGAAACTTCAAAAATGGTCGCAT TTGGCTAAAATTTAGCACACTTGTTTCTTGGGTGAATATCTGGGGGTGTT CTTTTTCCTTCGCTGGGTGAATATTTGAGGTTATTTTTGGACCTGTTTGG TGGTCCTTTGAATCAATCTTTGTCCGTTCGTTCGCCCGTCTATTACTTGT CTGTACACAAACTCAGTATCTACGGCTTATTTCAAAATTCATTGCCGTAG AGGGTCTGTTGTCATTGTCTTTTCTCATTTGAGAAAAGGGATTTTTTTGG CATTTTCTCGAGAATTCCTCATTAGTTTTTCTGATTTTTTGCACATTAGC ACATGCGTATTAGAAATGCCCAAAACATGGCCAAGTCCGATTTTGAAGAA AACTTTTTTTTTCCGGCCGAAAATGCTTGAAATCGCCGTTTTCGATAATT TTTGATGACCATTTGTTTATTTTGTTTCAGTCCCTTTTCTTATTTTACTT CCTTTTCTATTTCCATTCTATATTTATCATTAGGTAGGCCCATTATGCAT TTTGCTTGTTTATTTTTCATTTTTTTGAAAGTTTTGATTTTTTGGACCTG GGGACAAGTTTTTCATTAAAACTAGGCTTTTTTTATTGGACTTAGCCTAT CAATTTTACAATAGTCCTTTTCATAAATTACATCACGAACAATACTTGCC TCGTTTTAAAATTATTGCTATTGTGAACTACTTTCTATTCTTATTCATAA AAAAAAATCATTTAATGTTTCAAGGGACATAGTCGCCATGGTAATTGTTT GAATACGAGGCAGTTGTTTGTGACAAAATTTATGAAAAGATCTATTCGGC CTACGAATAATTAAAAAATACTAAGCCTAGTGCCGTTAGCATGTTCGTCA GTTCTTTCAGAGCTAAAATTTTGAGAGTGTGATTTGTAATCTGGCCTGTT ACTCTAGGGAATTCAATTTTCGGAATAGCTTTGTCTCTCCAAGGGTTATT TGAAACATACTAGTCTTTTAAGGGTTGAATTTTCATACATTGACTCTCTA AGGATAAGCTTGTATCTCAGTTATAGGCTAGACAGTGGGGTCATGCAGTT GGTACGAGACATCATGATGACTAACTGCAAAATTGAAAATTTGGAAGTAC GCCCACCACCCCTCAGCAGTTAGTACCCAAAAGTACTAAGTGCTTTTGAC TATTGACATGTTGACACCACTCCTATTCGCACTCGGTACCCCAAAGTACT AAGTGCATTTGATCATTGACAGGTCGACACCATCCCTATTCGCACTTATT ACCCCAAAGTACTAAGTGCATTTGACTATTGACAGTACCATTTGATTGTC TTGAAATTTACAGTAGACCACCCTTTACAGCAGCAGCAAATTCAAAAAAT CAAATACGACCCACCACGGTACTAACCGTTATGATGTCTGGTACCAACTG CATGACCCCCTGGCCTAGAGGCCCGCCTAGAGGTCTGTTAAATGTACTCC TAGGTGCCTAATAAATGCCCCCTCCCTCTGTTTGGTAATTTTTCGACATT TTCGAACAGGCATGGGTCTTACTTTAGGTATGCAGTGTCCGATAACTAGA AGTGTCCGCCTTTTAGAAGCTTTTCAATTCTGTGCTCTAATTTTGGTATG TGGTAATTAAGGGGTTAATTATGTGAACTTTTGGCCCGAAGTGCTTTTCT AGAGAAAATAGGACATGGAAAAACAGGAGAGTGTTTATTCAAATGCAAAA ATTTACCGGCTGGATAAAGGGAGCGCTCCAAACGTCTATAAGCAATTTGT TCTATAAAGCTTTGAAGTGTTTAAGAAATTAATAGTTGGGATAAATCAAT CCGTTGAACTTTTTAAAGTCTGACCGGTTCGACCTTCGATGTCCGCTAAT TAAAGAGGAAAGAGTAGGAATTGGCATTCTTATGCAAAAAACTTAGTCCG CTAATTGAGTGTCCGCCCTTTGGAAACTTTTTGGACCTAACTGGAGATCC TATAAATTAACCTTTGTCCGTTCGTTCGTTCGTTCGTTCGTCCGTCCGTC CGTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCGAGATTGGCTCATTAGT TTTTTCTGATTTTTGGCACAAAGATGCGTATTAGCAATGCCCAAAACATG GTCGAGTCCGATTTTTGAGGAAAATTCTTGTCCGGCTGAAAATGCCGGAA ATATGCCGGAAATCACCGTTGTTGCAGATTTTTCCTTGCATTTCTAGTTT TTCCACATAAAATATTGTTGATAGCAATTAATTCCCAATATTTTTTTAAA ATTGCCGGAGCAGCCGATTTTCGTGCCCGCAAAACGAATTTTCTTCAATT TCTCAGGTCTTACTCAATATTTCATTCATGTATTTTTGGTCTATTCTTTC GCTCGCTCTTTCATTCGTTTACACGTTCGTTCGTTCGTTCGATCGCTCAT TTTTTCGCTTAGCTTTTCCATTAATGTCTATGTTTTCTCTCATTTGGCTA ACTTTCGTCATCAGGTAGGTCCAATCAGCATCCAGCTTGTTTTAAGAGGA TTTGACTAGGAGATAGCCGGAGAAAAAAAATTGTTCGCTAATCAGAGGTC GCCTTTTAGAATGTCCGTTAATTGAAGGTTTTACTGTACAAACTTTCGCA AGGTTGAAAAAACCGTGAAATTTAGTTACCTTCGCGAGACGAAAAAAGTG TTTTTTAGCGAGCATGAACTTTTTACATAAAATTGTATAATTTCACACGA AAAAGGCTTATTTTAAATTGGGTTGAGACTTTTTTGTTTTAGGTTTAAGT AGATAGATAGATATGAGCCCTCGGAATGCATTCGGGATGGGTCCTACCCA CAAAGGTATAGGAATCACGGCGCTGACAGACACAGCCACTTGACAGACGT AAGCTGCCAAGCCATGGCGTATACCATGACACTCGAACGACACTGGGATA GCGGTGCTCACGCGAGGCCGAATCTTATGAGTGCCACGGCACGTCACAAT GTCTGTCTAATCTACCCACACTCTTGTATCAGAGTAATGGTACCCAATTC CCCTCACATGGCATGGGTTGACCCGGGCGAAGGTATTTTCACTTGCCAAG TGAATCGTAGAGACACGGTGGGTATCGATCTCGGGCATCCCAGGCGAGAG TCAAGGATGATAACCACTCTACCACTTCGCCTTTCTCTTTTTGTGGGGGT ATTTAGAGTTACAATTTCTGAATTCCCGGCAATTATGTTATTCCCCCGCT TATTATCATATTTAATTTTGTTTCCAATTTCAGATATGATGGATTAGTAC ACGCTACTGACAAAGATACTTTTGACGCTCTGGTTGAATCTTTAAAGGAT AAATGGGACAACTTGGAGTTTCCTTTTCTCCCAAGAATGATTGCAATGCC CAGGTTTCACAAGTGGTTTGTGGATAACATCGCTGGATACATGAAAAGCA CCATGATCGAAAATGTTCGAGCAAGAAACGGAATCGATGGTTCATTCACA ACAAATCAGAGTGAAAGCTTAAATGCTGAGTTGAGGAGAAAGGTTAATTA TCAAACAAATGAGTTGCCTGACTTTCTCGAGTTAATGAGACAGTTTTACA AGTCACAGGAATCTGAAAATCAATCTGCGTTTGTTGGTGAAGGCGATTTC CTCATCTCTGATCTATTTTCCAAATTTCAAGCCGGGGAATCATATTATAA CATGTCCATTTCCGAGCGCACAGCTTTCGAAAAGCGGTTCTACAACTCCA GCCCCGCTGATTCACAAAAGGAGAGTTTGTTTGATGAGATCACCATTCCT GGCCTTGACGCAGATCATAGTCGAAATATCGTTTCCAAAGCGGAACGAAT ACTTGAAATGGATGGGGTTGTGCCATTTAGTTCGTCTGGATCTTTTCACG TAATCAATAGTGAGGGAAGTCGACCACATTACGTTGTGCAAAATAAAGAC GGATCATTTACTTGCGATAATAGGAACCTCCGAAACGGATGCATCGGATT CAACGCCAGCAATGTTTGTTCGCATACTTACGCAGCTGCCAAGTTCTCGC GGAAATTACAAAGTTTCTTCAAGGCCCTCGAGAGAAAAGAGTCAAAAGCC TCCGGTAATAATCTTACCAACATTTCACATTATGGTATCTCAGAAGGCGC TGGGAAAAAAGCCGGTGCAGTCCGAAAACGTAAACAAACTCAAGAAATCG CCACTACTTCACCAATGTTGGTGAACCAATCTTTGAAACTTCGTGTAATC AAGCATAATGGCAATCACGTGGCTGTCCCCACGACTGGAAAGGATTACAC AAAATCAAAACTGTTCGTTCGTGTGCAGGTTGTCCCTATTCTTTTGCAAG ACTCGCGAACAAGGATGCATTCCCCCCGCCCGACGATATTGCAATCTGCC ACAAAGAAAACGCTGTTTGGAGAGACAAAGCTACGGGAACTTTGCGACAA TCTAATAAATTATCGAATCGCTATTACCATGTCAATCCGGTTTGTGTCCG CAAAGGCAGTGTCGAGAACAAAAACTTCTCATTTGAAGACTTGGATATTT CCACAGTCGACCTAAAACCTGAACATAAACAAATGATCGGGAAAAACTTT GGTGTTAAACTTGCTTAGTTAGTCTCTAATTTATTGTTGCGCAGTGGTAC TCTCTTAAAGTTTTAATTCCATATCGGTTTCTGTTGGACACTAAAGTTTT TTTTGTATATAGCTGAGTTATTCTTGCCTACGAGACGGTTTGGTCGAAAT TTTAGCAAAGTAAGAAAGTTGCATTTTACATTGAATGTCCGCAAAATATT GCAGTTCAGTCAATCAGCAGAATCAATTCACTTGAGGTATTTTTTCGCCT TGTGCTATTTTCTTTTCTGTTAAGGCGCTTCGGGCCTCAAATTATTCTGA TCCTTTATATAAAAAAATGTAAACTGCATGTTTTGGCTTTCCAAGAAAAG TCGTAGCCGACCGGGTCTTTTTTAACATTTTTAGCGTGTAAATTTTGTTA ACTTATTGGTGTGACTGGCTCCGCCTGTATCTTATTGTTAATTTATTGTC TTTTATCATTTTTGTTAACTTGTCTTCTTTAGTTCCACATATTTTTCTGT GACTTTTTTATCTCAATTATTGAAGATAAAACAATGATGTAAGATAGTGT AAGATTGCTGAATCGCGAGATCGAATCAACGCGGGATTACTAAAATATTC TCCGGGTAAAACCAGGTATTCCATGGCGACTCATAGCTGCTTTCTGGCTT AGAAAAATGAACACGGGAATTTTCTTAATTCAGAAAAAACTTACCAGTGT AATAAAGAATTGGTATATCGAAGAAAATTGCTTCTCAAAACCCTGTAAAA GTTATTTTGAAGTCCATTTATATGACAATTTATGTTGACTTTTATAAGCA TTTATTATTTTTTTTTAAGAAGATTATTTGGTACCTTATTGGTATTAAAT TTCGCAGGTTACAAAATTTCGCGGGTACTTAATTTCGCGATTTTTGGGCC AAATTTCGCGAAATCTAATACCGTTTAAATTTTTTCAAAAATACAAAATC GCGAAATTAAATGCGAAAAATTTTCAAAATAGACCGAAAATCGAAAATAC GTTACACTTAGTTACTTTTGTCACTAGTTTTGCTACGTTTACACCCAATA AGTCGTGTTTCAAGCGAAATCAGTCATTTTATTGCTTTATTCCCACTTTT CGAAAATGCCCAATTTAGTGGATCGCGAAATCTAATACACGCGAAAATTC CTAAAAAACGGGCAATCGCGAAATTTAATACACGCAAAACACATTTCCTC GAAAAAATTTCGTGAATCACGAAATTTTGTAACCTGCGAAATTTAATACC AATAAGGTATTAAATAAATACAGTATTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063739TCONS_00063739Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063739-proteinTCONS_00063739-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:108639..117168 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86 0.73 0.42 0.33 4.86 3.56 5 4.86 2.79 4.76 3.01 3.51 2.38 3.09 1.6 2.05 1.31 1.47 1.22 2.02 1.9 2.02 1.19 1.59 2.01 2.84 1.63 1.14 1.52 1.16