XLOC_040193 (gene) - C. hemisphaerica

Overview
NameXLOC_040193
Unique NameXLOC_040193
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_408:42647..47531+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040193 ID=XLOC_040193|Name=XLOC_040193|organism=Clytia hemisphaerica|type=gene|length=4885bp|location=Sequence derived from alignment at scaffold_408:42647..47531+ (Clytia hemisphaerica)
acattttattttttagaaaaagatacattttgatatttttagattagaaa aaaaatgagtgaGAATTCAATTGGACGttcagcaaaaatattttttgttg tttgtgcTTACTGGTGAGAGGTTTCCTACTTTTTCTATAAAAGTCTCCAA TTAAAAATGAACCATGACCTTTTTGATCATTGAGAATTGTATTTTAAATA GACTGAAAAACCTTTTTCCCAATATatactttatatattttataataCCG TTTATCAAAAGTATGATACTGCTCTGTCAATTAGTATTGAGCACTCAGAT TAAATTTAAAGTCATTTGTACAATATATTATTGTCATAAATTGGCATGTT CAGAAAAATGAAATGAGATGATGTTTCTCTTCCTCCaagttttttaaaca ttttagtTTGGACTATTATCCTTTTAGAATGAtttgttttttatcaattt caggTTTGTTTCAATCTCActtgtatttttgaataaatttttattgagtG GTAAAGATTTCAAGGCAAGTATATACATCATTTTATACATTAAAAAACTT TCCTTACCTTAATTCTCCCCCTCTTTACTAGGGGAGGGGTAACTTTCCAT ACATTTGTGTCATCACAAGCAACTTtaaatacaaatgaaatggaaCGTTC CAGCAAAACGAACAATATGGAACGTTCTTGAACGTTTAGGAACGTTCTAA GAACGCTAGAGAACGTTCTTGAACGTTCCTGATCGTTCCTGGTCATTCCC TTTTATTTACTAGTTTAAGGATGTCTTAAAACATTCGGAAGCGTTCCTGA ACGTTCCATAACGTTCTCGAACGTTCTTATTGAGTCAATATTAACCTTTG GACTCAAAAGATCGTTCGCGAGTGTTCTGGAACGTTCTGCAACGTTCTCG AGCGTTCTGGAACGTCTCTGAACGTTCCAAACGTCCCTGAACGTTTTAGA ACGATCGAGGACGTTCTAGAACGTTCTAGGAACGCTATGGAACGTTCGTG AACGTTCAGGAACGTCTCAAGAACGCTCTGTTTTATTTGTACTTCAAATA GCTTGTGATGacacattttggaaaaaagcatagcttttttttttaatttc attgaGGGGTGGCTGAGGTAAAGAGGGGTGACCAGGGGTGGGGGCAGGGT TTCTGTAAAGCCAAAACCAGAGATCAACTAAATTAACATGATCTACTGAT tatgattttattcaaatttattcCATTATAAAACAAGCAATTAGAAAGGT TTGCCAATGACATTTCAGAACATTTAAATTGAAACGGACTTTACCATCCA TAGGCCAAATTAACTTTGATACATCAGTGTAGACTGTCCCCCTTTTTCTT TCAGCTTGATGCACCTATCTTTATCACCTGGTATCAGTGTGTATTTTCCC TCCTTATTCTATTCTTATTGAGTTTTCTTGGCGATAAATATCCATCTATC GATAAGTTCCCAGAATTTCAACTGAACCCAGAAATATGCAAACAAGTAAG TAGTCAtcaccacagatctgtaaagcccaaagggctagatccGCTGCCTT TATTAAAAAGTGAAGTTTTGTAGGATTGcttaccaaagaaatcacgtgac aacaagcaatttcacttgtttgagagatgcgaaatacatgtttgtttttt ttataagcaagtgtatgccccctggtcaggctcgtgtatgcttaagttct caaagcacccaggcatagtttatgcttattatatgcttaagaattatgct tattatatgcttaagaattatgcttattatatgcttaagaattatgctta tgattcaccccgagccaagtttttaatgatattttagaaattttgtaaaa atttgttcagattttgggagcagtggaatgtagctagccgtggaatttct tattttttacttgacctctaccaaacttttttaaacagataaaaaatgac aacttgttaaaaaatattataggctgacatatatgctcatgttatgctta ggaattctgcaaatctgagccttcatatgcttataagcgttatgcttata aaaaaaaaacatgtagcgtGTGCCGCCTATATTTTTGATCTTGCACTCTG AAAACTTTCACTCTTTTTTgatggagaaagcttaaagttgcttatctagc ccttctggctttacagatatctgtggtcatcactatcattaaaaatgatg tttttacttgtattttatcaattttctggaAGTTGTTGAAGATCAGATGC AAACTTTACTTCTTGACAGTAGTATATAATACACAAGttcattcaaaatt tatgttcTGTTGTTAATTTGAATCAAAATTAGaatcaaaaatcaagtttt tattttaatatacTTTAGGTTTCTTtacttttaaaaagcttttaaatCTC ATTTAAATTATATTCTATTAAATAAATTACAGTCAGAGTATTTTTGgcta aatctttgtttaatattgttcttataaaaaataattatttcgtTTTAGAT CATGCCACTCTCGATTGTTTTTGTTGGGATGATAACTGCAAATAATTTGT GTTTGAAATATCTCGACGTTGCATTCTATAATGTTGCAAGAGCACTGACA ACATTCTTTAACATAGTAAGTACCTACAACATACTGATTGAATCATTGac aattttatatgaattttgaaatcccTGATTCCAAATAAACCAGTgcttca ttttcatttaaaaaaaattgttttttcccTTCTAGGTTTTCTCCTACTTT ATTCTTGGTCAAAAGACATCAGTTCGTGCAATCGCTTGCTGCAGTTTAAT CATCTTGGGGTTCTCTCTTGGAGTAAAAGAAGAAGGCCAGCTAGTTGATC TATCATACAAAGGTgtcttttttggagttttgggTTCTTTCTTTGTCTGC ATNATTATCATACAAAGGagtattttttggagttttggGTTCTTTCTTTG TCTGCATGAATGCCATCTTCACCAAACGTTGCATGCCAGCTGTTGATGGC AATATTTGGCGTTTGCAAATGTACAACAACTTCAAtgctgtgtttttttt tgttccttTGATTATCATCAATGGAGATCTATCAGTGGTAGCAGCCTTCC CACATCTATATAATCCAAGATTTTGGCTCATGATGTCCCTTAGTGGAGTC TTTGGTATTGCAATTGGTTATGTTACCGGCTTACAAATCAAGGTCACCTC ACCACTCACCCACAATATAAGTGGCACAGCTAAAGCATGTGCTCAAACCA TCATTGCTGTTGTGTATTTTGTAACATTCAAATCAAGTCTATGGTGGTTC TGTAATTTCCTTGTCCTTGGTGGTTCTGGTTTATACACCTATGTCAAAGC TGCAGATATGAAAAGGTTGACTGCATCTATTAGTAATAAAATTTGATAAG GGAGttcttatttttgtttgtttgatagATTGAAAACATTACTCTGGAGC GGGGAAATATATAGCTAAacattgttggaaagatattgagTGGCCTGGTG Taagtttttaagaattttctaaaagtttttaaaatgaagatgaaaaatga agattttttctgctgattcaaaACTTAAACTTTGTGATTTCCTGAAACTT TGAACCcactgatttcaaatatgtattgaaatattttggacTAACAATCC TCCTAGAAAGGTCCAAAATGGGCgaaaaattgcttaaaaatgcTCGAAAT AGACCTATTGGCTATATTGGATGTCCAATcaatcaaatgtttttcaataa TAACTTTTATCATCAAACATTTGAACACTGTACagaaaaacttaaattta atttatttgtatcattTATTACTATTAGTGGTTAGATTATCTTaatctta taaaagaaatagCAATATTTTGCTTTGAGCATTTGTCACATGATACatgg atattttttatatagGAGGCCCCCCAAGCAGTTTATTTGATTTCTTGATA TGGACAAATTTCTAGTGTGATGAACGTGATCtggaattttgagctgtgat gcgtgatttgaactttttcaaagggatacGTGATTATCcaagttttttgc tgttttatgTGAGTGTGATTGAGGACAAAAAATTACGTGATATGGTGATA TGAGTTATCAGTGGGGAGCCTCATTTATAGCGATAGTATTATTGGTATTA GTAGGTATATAATATtagattttagatatttttgtcATAATTATGTAATT TTAagttaaagccaattttataGCTTACGCATTAGGTGCACTGTCATTCT GGTATTACCAGATTTTACCCCAGCTTATTTCTGTTGTCTTTTGCTTATTT TTTATATAACGTCTCCCATgtaaaaacatcttttgaaaatattttatctc aCTACAGCAGACTGATAATGCTTGTATTGCTTTTCTTGTCTCTCCATCAA TTCTTCTATAAGTTTATGACGATTACACCAGCTGGAAAAAGCTTTAAGTT TTTTGGTGATATGCTTTCAGGTTCATGATTTCAACCTTCTttataaagat attttttgGTAGATTAATAGGATAATCAGTATTTTTATTAAGAAAACAGT ATTATTTTAATAGTCTaatatttatttctattttcttaGTTTCCAGATAT CATGATCAAAATTTGTTGGAAAGCTCCTTGTACATGTTGAAGCCTAGACG ATAGATTTAATTTTGACGTACTTTGATGATAAGTTTTGTCTGGGCCATAC CAACCctaaaatcggaaaaattgaaatgaatacTTTCATTAGGGTAGTTG ATTATTTCGTGATTTTTATTATCCTTGAAATATTAATTTAAATTGTGGAA TTATTTTATACCTAAGATGTTTTAAACATATTATTATTCTTTGCTACATG TTTgggtagaaaattaaaaaatacattgaaaaatG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064105TCONS_00064105Clytia hemisphaericatranscript
TCONS_00064106TCONS_00064106Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064105-proteinTCONS_00064105-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_408supercontigscaffold_408:42647..47531 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC35C1GDP-fucose transporter 1 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.37 8.41 2.08 1.63 34.75 24.89 32.52 32.4 20.58 24.92 15.81 12.75 10.39 7.31 9.12 10.19 21.36 16.1 8.42 15.86 17.26 18.05 26.98 29.36 7.65 10.95 15.14 9.72 24.14 19.7