XLOC_040548 (gene) - C. hemisphaerica

Overview
NameXLOC_040548
Unique NameXLOC_040548
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_420:43976..48134+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040548 ID=XLOC_040548|Name=XLOC_040548|organism=Clytia hemisphaerica|type=gene|length=4159bp|location=Sequence derived from alignment at scaffold_420:43976..48134+ (Clytia hemisphaerica)
TATCGACGTGTGATTACTCTCGATATTCTTTCCGCCCTTATACTAAGTAT CACGTGACAAAGAAGCGCCGAaggaacaaaaataaattcatttattttct aattcgtacactcaaacgaaaataaccttatttattattttacttCTTCT TCTTATCACTTTATATACCTAGTATATAAAACATAGTATGGTCGTCTAGA TAACCTGTAACTTGTCACAGAGAGAAAGAGGTATGTATCAGAGGCCTAGC CCTAGAGAAACCTTCAAAAGACTATTTATATCTTCTTGAACATATCCGTT CTTTACACCAGCGGTTTTCCACCTCNGTAACTTGTCACAGAGAGAAAGAG GTATGTATCAGAGGCCTAGCCCTAGAGAAACTTTCAAAAGACTATTTATA TCTTCTTGAACATATCCGTTCTTCACACCAGCGGTTTCCCCCCTGCCATG CTTCTGGAAAAGTCTATCATTAACTCCCCGGTTAGCGGCTTCCGTAGCTC CGCCCCTCCTTAGGCTGTGGAGTCCAAAAAGTTTTACGTCAAGACCAATT CTCTTGATATAAAGCAAAACAGCGGACCTGGCCGTTGAGTAACAAATGGG TTTGTTCTTATTTCTCAGTTTATGAATGCcctttttcttaaagaaagaaG TGGCACGGAATAGGTACTCATTATCGTTGGTTATGTTTGCATTCTTAGTA AATCTAAGCAGTGTCTTAACAGGACAAAAGGGGGAATCTAATTTGGCAAT ATAGACCCAAGCCCCTTCACGATGTTGGtctgtttttgacttttctatGA ATAGTTTCATATACGTCTCAAAGACTAGAATGTCCCCAAAGATTAAATTT GAAACCTCATCATAACGTAGAAATCCAGCATACGATAAGATGATAATGGT AAAATTCCTCAAATCAAGCAGGTTAGCCTGGTCCCCATTAATCAATTGAA AGATCTTACGAATGTGATCTGAAGTGATTGGTTCTTTTTTCGAACTTTTT CTGTGGCAGATTCTTTTTGCAGCTTCGAGGATGTATTCGGCTAGCGTAGA AGATGTTGGATCTGGCTTCGAAGCCACATTGTGGAAATGTTTCACGGCGT AGAATACAGATTCTATAACGTGGAAAGATTCGCCAAGCTGGATAAGGCTG ATGATATATAGAACGAAGTGAAAGTCTTTGGCTGGAAAAGGCTGGACCTC TTCGAATGTCGCACACCATCTTTCCCATTTTTTGAAGTAGCAGCTATATT TGTTAATTGTACTCTCTGCACGAGCTTTCGTCAGGATATCTCCGATTCCG GTAGCGAGCTCTTTAAGCTGTGGATCATCAACACGAGAAGACAGGTCTTG GGCGACTTGTGCTAAAGGTATAAGTGAAATGCAAGAGCAAATTACTATTT TGTCGTAAATATGAGGCATTTTTGACTTTATGCTACGGCAGCCAAGCTGC CATAGCGACCTAGTCGCTAAACTCTGGCCTCAGTTGATACCGCTAATCAA CCCCTGCCTCACCCTTCTTTTTGGGTGtagaaaatatatttcaaaattaa tataGCCTTGGTTGATACCACTAATCAACCTCTGCCTCACCCTTCTTTTT GGGTGtagaaaatatatttcaaaattaatataGCCTTGGTTGATACCACT AATCAACCTCTGCCTCACCCTTCTTCTGGGTGCAGAAATACATGTTAAAA TTAAAACAGCCTCAGTTGATACCACTAATCAACCCCTGCCTCACCCTTTT CCTTGGGTGTAGAAATACATGTTAAAATTAATTCAGCTTCTTTCTATAAG GTGATAAGGACTATCCTTCTGAATCAACTAATAACCTCTAAGGCTATGAT ACGTCCTCTATATCGTGGAGAACCGAGTAAAGAGTATTTGTACCTCCCAA GGCGTAACAAGTTCGACGTGTCTTCGAAAATAACGTAATCCTtgacaaaa tatgaaaattcatCCCCTTCTCTTAGAAGGGGCCAAAAAGAAGACGCTGT CCAAAAAGGTATGACGAGCACCCCTTTAATTCCTGGTTGGCTTTTTAAAA GGCGTAAGACTTGAGGAATCTGACTGACAGGAGGAACTAATAAATTTCGC TCTAAGCGCCAGTCTTGAGTGAAGGCGTCAACAGCCTCTGTACCGGGCAC AACATACTTGGAATTAAACCTCTCGCATTTTGCATTGTCAAAATTAGCGA ATTTGTCGACTGTAAAGTTACCCCAACGATGTTCGAGAAAGTGCAAAATT TCCTCTGTGATTTCCCAGTCGTCTGGATCTATTATTTTAGAAACTCTGTC CGCTACTCGGTTCTCGTCCCTAGGAACCCAATTCACTTCCAAATTTATAT TAAAGTTACGAGACAATTCGTAGATTCTTAGTGCTAATTCTTGTAAATGG GGCTTATTGCTACCACCTGAAGAAACATACATGGCTGCTCTATTATCTGC CATCCAAGATATGGAAGAGTTACTTAACTTATGGCAAAATGAATCCAATC CGAATCTGATCGCTTCGAGTTCCCTCCAAGTTGAACTTCTATCAATTTCC TCTACATCAAACATTTTGTTACACACATTTAAAATCGAATTCTCTTTTAA TACATCTCCTATCCCACTGCTACTTGCGTCAGAATAGATAGTATACTTCA CTTGGGACTTTAACACGCTTTTGTTTTTTAATACATTTACATTGTCTCTC CAAAAAAGAATTTCTCTGAGCGTCTggataattgaaaatgttaaacTTCC CATCCCATGAGACAGCTTCATCAATGGCTTTGTATAAAGATCTAGTTTTT AATTTGATAATGTTTGACAAAACAAATTTCATTATGGTCGTCTAGATAGC AAGAGTGCGAAAAGAAATGTCTTACAAATCCTATTTGTAAACATACATAA ACTAACGTAATATAAACaccaaattatcaaaataataaagtaaatgTTAT AGAGCTACATAAAAGGGCGGGTGGGNAAAATTATCGATACTCCATGGTTT TAAAGCtataaaactaaatttggctttcaaatcttttcaaaagCAAAATC CATTGAAAATAGCTTGGATTGGTTATAAAAGAAGCTAATGTACCCTGTag gctttttcagaaaagttgaaaaaaattctaaaaatattcaCCAAATATGT TCTCCATTGCCAGCTATTGTTACACACCAAACTAAAAGTaaaagacaaaa attttgaaaaatgttttaaaacatGTACACCTGATAACGAGAATCCATGC ACGACGGGTTAGCTCTTCTCTTCACTAAACCTGGCAAACGACAATTTGAC AACTTTCACGGGGtctaattttcaaaatcctGCGAAACTAAAAggatcaa aaaaaattgaaaaaatatatggaaTATAATAAGATAACTGTCAACTTTGT GAAGCAATTGTTCATTAAAAGTGCACTGCCACTTAAAAACGAGTCTAAAA AGGaactataaaataaaacacaaagaGCACTTACAACCAAAAACGATCCA AAAGTTAAAACACCATGACCAAAAAATACTTACCACCGATGGctgaaaaa atttcaatatcCCTCAGGGGAATGTAGTTTGGATGAATTTGTCTTTTCTG CAGTCGAGTCACAAGTCAAACTAATTCAATTAGTGATTTGTACGAAGCTC AATGTCATATTTCATTTCGAAATGATTGAAAACCCGTAAAAGTTACCTTT CTTTTAAACGTAAGCGTCTAGTTCACATTTCATCTCGATAATCGTCACGT TTAATTTTCACTATTGAAAACAAGTTGTAAAAAGCCATTGCTTTGCATTA TCCAGATAGTGATTGCCtatgatttcttttgtttcaagcagGCAATAATT TTCTGCCATTCTGCCTTGCCGCACATTGCACATGTAAGTTGGTAAATGGG AAAATAGCTTTGAAATAAAACTAAACCATCATTAAAGATATAGTTTCCAA ATTGACCAAGAAGTCGATCGTCTTGTAAAAAGCCATTGCTTTGCATTATG TATCCAGACAGTAGCTTAAACTAGATGGTCGGCTCTGAAACCGTTTGCAA TATTCCCCTCCAACATTTGCCGGTGGTTACGCTCATGAATCTGTTTTCCA GTAATTGCCTTTGGTTCCTTTCGTTTGAAGACATTAATATTCTCGTCGTT TTATaccaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064640TCONS_00064640Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:43976..48134 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.5 0 0.47 0.06 0.09 0.05 0.25 0 0.04 0 0.03 0 0.06 0 0.03 0 0 0 0 0 0 0 0.04 0 0.08 0 0.06 0.07 0.27