XLOC_041082 (gene) - C. hemisphaerica

Overview
NameXLOC_041082
Unique NameXLOC_041082
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_440:137132..143884+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041082 ID=XLOC_041082|Name=XLOC_041082|organism=Clytia hemisphaerica|type=gene|length=6753bp|location=Sequence derived from alignment at scaffold_440:137132..143884+ (Clytia hemisphaerica)
TATTGAACAACTTTGTAAAATCAGATATGTCTGAGGAGGAAAAATTTGCC ATTGATGTTCAATTGATGAATGTTGCAGAGCAAAATAAAGTAAGGCCTCA TCAATTATTTGGAAAtattataatttaaaaaaaggtttaacTTTGATTGT ATGATACAGTTTGCATGCACAACTTTTTTcacaataatatttttttaata ctaGTGTGTGAGTTGGTAGTGGgtagaaataatttttgcgTGAGTGCATG GGTCAAAAAAGCTGAACAAAACACATCTTAGATTCATTTTTATGTCAAGA GGTTCAAAATCAAATACTTTGATTTAATTTAAATATAGTATCAAGACAGC ATATATGCTTTATCGTACGCTAATCCTGCTGCCTGCTCTGGATAGTTTTC GTATCATCAGTAcgtgtttttcaattttagggGGTTCTATTAGCTTGGTG TTGCAAACACGGTAAAAAGTTGGATGATGTTATCAAACAACACGTCGATG CAATGTCAAAAGAGGTTAAAAAAAGACTTGGAGGGGATCCACAGTCACGT CTACTGACCTCCCTGTCAGCTAATATCCTGACATCATTTCAGGTGAGTTA TAATCCAATCCTTTACACAACCTTTCAACAGTGTTTAAATAAATTTGTCA ACAGTGTTTATAATGATTTTTATCAGATTGATAAGCTTATGCTTGTGAAA CTTcattaaaaaagtgaaaaatgaaatacctctaagaaaagcaaaaatgt gcattctattgaaaaaaggtttcttttgttcaaaattttctgaattaacc ttttctttcttcaaaagaACACACTTTTCTAAAAACGACcaattttctaa acttgcctcaccttaattaaataaaaaaagccTAAATTATTTGTGGTAAA TAATATCCATTGCTGTGCAAGCACAATTTTGTGTTACTCTTTTATTTATT CTGCAATTTTGAACAACCCTTAGATAATTCTAACTATCTTGAATTGGAGG ATTTTTAAAGACttagataaaaatgaaatttcgaaATAGGAAGGTCATCT TGAAGTCATAGAATAAATATGTCATCAGATATTAAAGGAAGTATCTGATG TACTGTATTTGGTCAGATTTTGTTTTATTCCATTGAAAGTCTATGCTTTT GGACTACGCAATTGCAAAGATGGCGGACGCAAAACCGTCAATCTGTAACT TACGGTACTGATTTTCCAGAAATTTTAACTCTTTGCTTAGTGAACAGTGC TTAAAAGCATAAGAAAGTTTACACCAAAGATGGAAGAATTGATGCGGaaa ctttttcctgaaaattacAGTTCAACCGGTGCTATACAATCAGAATCTTT GGTGGCGAATGTACCCGTTCCTGACCTAGCTACCGTGCCCGTGTACCGTG ACTCTCAACCTCCGAAACCACCGAAAGAACTTCAATACGAATGTAAATGG GGTTGCAAAAGGTCATTTTCAAAGCCATCAGGAAGGTCAAATCACGAAAG AAAATGTCCGCTTAAAAGTCACACTAAAGAATTCGAAGATCCTGTATCGA AAAAAACTGTCAACCTTAAAGTGACATCACTTAACCTAAATAAAGAATCG TCGTCAGAACcgataaatccaaaatatttCCAGCCAAAAGTATGGGGCAA TCACACAGTGAATGACATCGATCAGATCCTTTCTGCCGCGTCCAATGAAA CCAGTCAATGGCGGAAGAATATCTTCAACGTCCCAAGTGGTGCAGTCGGT AAAAACTTTGTTGAGGAAATCACTCGCTTGATAAATTTATGGAACAATCT GTCACCTTTGTCGAATGTCGCCTTGAAAGCCCTGTCCGTGTTACCATCGC TCCTTTTACAGAAACCATCAAAGACATCGAAATCGAGAGAACATACGAAA CATCTACAGCGACGTCTGGATCTTTGGAGAGAAGGCGATTTTGACTCGTT GATCCGCGAAAGCCGAATGctacaatcaaaattttcaaagtctgctGCTG ATCGAGTTACATCAATATCGAAACGATTTAGTGATTTGATGTTTCAAGGC AAAGTGTATGCAGCAATCAAACTCTTATCTAACTCAACGAATTCAAACGG AATTGTACCAATCAACGATACCACGTTGCAAATTCTTCAGCAAAAGCATC CTAGAGGTCGACCAAAGATTGACGAGCTGATTGTTCAGGGACCATTCAAC AAAATCGACCCCACGCTTTTTGAAGCCATCGATGAAGAACTCATAAAAAG TATGGCAGCTAAAACAAAAGGTTCTTCCGGCCCCTCCAAGATCGATGCAC AAATGTGGCAACGTATCCTTTTGTCAAAAAACTTCGGTGATCGTTCTAGT GATTTATGCAAGGCGATTGCAAGGATGACGAGAATCATGTGCACTGAACA ATGCAACAAAGAATCCGGTAGGGACATGGAGGCGTTGTTATCGTGCACCC TGATACCTTTGGATAAGAACCCCGGCATTCGACCGATCGGCATCGGGGAA GTTCTTAGACGCATCGTTGGAAAGACTGTTACAACATTCCTGAGGAATGA AATACAAGAAGCAGCTGGCAATCTCCAACTGTGCGCTGGTCAGCTGGGTG GATGTGAGGCTGCAGTGCACGCGATGTCAGACATCTACAACGACGAGAAC ACAGACGGTGTTCTACTGGTCGACGCTTCAAATGCATTTAACAGCATAAA CCGTGAAGTTATGATGCACAACATTAACATCCTTTGTCCAACCTTGGCGA TGTTTGCTACCAACTGCTATTCGAACCACGTCCATCTGTTTGCGATTGGA GGAGCAGAGCTGTCGTCTTCTGAAGGTACAACACAAGGAGATCCGATCGC TATGGCTCTCTACGGCATATGTTTGCTTCCCTTGANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTAGCTGATAAAATCTCGG CAAAACAAAAATGCTCGAAAAGTGAGGTTGTGAATGGCATACGACGCAAA ATTTCCTTCGTTTTGATCCGATCAGTGGTTGCTTGCCTGAGAGGTGAACG ATCTAGTCGTTCGTTTACCCCAGAACAAGCTANCAACAACTCCCATCAAT CAACCAAAAAGCTTTGGAAATCGCTTCATCTCAAGGTGCTTCCTCGTGGC TGACCACTCTTCCACTGAAAGAAGATAATTTTGTACTGAATAAACGTGAA TTTGCTGACGCACTCCACATGAGGTATGGCTGGGAAATGAAGCGACCCCC AGCTTATGGATTTGTCTCGTGAACAGGTCGATTTACCACGCTCATCTGTT ACTGGGAATGAAGCTAGGGCGGATGTTAGTGCTAATGGATTTTGGCAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNGCTAATGGATTTTGGCAGCGGTATCAAAGAGCATTTTTTG ACGTGAAGGTTTGCAACCTTTTAGCTCCGAGCTATCGCATAAAATCTATT GGCACTACATTCACTTCACTTGAAAAGCAAAAGAAGAGAGCATACAACGA ACGGATTCTTCAAGTTGAGAGNTTCATTGTTctctttttttaatcaaaaa tttataCAAAAGTATGTTTGTTAATATATTTGACTCATGTAGTATATCAT TTTGATTAAAATAATTATTAATAATAtcatcttttgttttctaaagTCTA TGCTTGCAATATACTGATGATTACAAGCAGTGTAAGTGTGAAGTGTAATC CGAATGGCATATAAATTATATCATTTCAGTTGGTAATTACCACTGATCTT CACAGGATGTTCAAGCCATTCGACATTTTTGATCAATGCCTTGGGAAGCA GGAGCAAAATTTTATATCAGACCACTGTGCCAACACGTGGGAGGAAATAA CACAAACAGTCCTAGCTGAAAAAGACAAAGAGGTAAAAAATTAATTCCTA CAGGAGTCTGATTATTATATGACACAAACTTCCTTTCAGTGTGACAAGTG GTTGCAGATAAAAAAAGGAAATGCTCAATTGTAATCAAATTTGTTGATAA CTTCTACTTCTGGAATacgtttatttgaaaatattggaCAGAAAAGAATC AAACGTAGCCATTAATGCGCTTCAGACAATAAAGCAATATATAGTTCTAA AGTTGATAACCTTAAGGGCAGAAAtgttggcaggaatttaatttggcagg tgatatatttttgacataaaaacACTACTGATTAAAACTGTTTTAAGGCC TAAATAGCACACTCTTGCACTAAACAACATTGTTTGAAACCTGTTTTCTT TTCAGCTTGCTACATGGTTCAACCCAGAAACGTCTTTTATCGAAGAGAGC AATGGTATCAAGCGTGCAGTCCAATGTATTGGGATTAGAGTTCTCAAACT TAGACAGTTTGATTGCAATTTTGATGTAAGTTAACACTTTTTATTCCACT TATTAAAATCTTAGAGtggcaaattcaaaatatagtaaagaaaaattctt ttgagctaaatttctttaaacaggccgtaactcacttgagatTACTTTGA TCTGCCCTGACTTGTGTCAATCAACAAACCATTGTTTTTCAATAGATTAT CAAATCCTACGTTCAAAAGTTTGGTAAGGGTGGGAAGAGGACTTACAATG TGAACGCTAAGTTTTGCGATTGTAAAACATCAACCTTGGacgatttaaaa aat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065552TCONS_00065552Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:137132..143884 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.93 1.8 0.76 0.28 8.94 8.85 8.41 8.38 3.75 4.81 4.93 2.79 2.4 3.53 2.76 3.02 4.34 4 1.34 0.84 3.16 2.85 2.6 2.19 1.44 2.17 1.04 0.25 1.58 1.33