XLOC_041097 (gene) - C. hemisphaerica

Overview


Name	XLOC_041097
Unique Name	XLOC_041097
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_440:613055..620506+

gene from alignment at scaffold_440:613055..620506+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_041097 ID=XLOC_041097|Name=XLOC_041097|organism=Clytia hemisphaerica|type=gene|length=7452bp|location=Sequence derived from alignment at scaffold_440:613055..620506+ (Clytia hemisphaerica)
TTAAATCAATACCGTGGCTATTTAAAAGACACAAGAGAAATCAAACGGAA
CTGAGACTTGTTTGGCAAATTAGGTAAAAACACAATTTATCCTAGAAGTA
GTTGTGCCAAAGATAAAAAAGAtgtatacactttttttatataagaacaa
ttttNcttttttaatttgtcttcattttattttaggtagaaatatgaaat
attggCATATGAAATGGCAGGTTGGTTGAGCTTAGTTAAATCAATACCGT
GGCTATTTAAAAGACACAAGAGAAATCAAACGGAACTGAGACTTGTTTGG
CAAATTAGGTAAAAACACAATTTATCCTAGAAGTAGTTGTGCCAAAGATA
AAAAAGAtgtatacactttttttatataagaacaattttataagaacaat
gaggttcaacatcgccaaaaaataaaaataatttaagaacaatgctgagc
ctgaagtCACTCAAATTCAACCAATAAAGTAGTAAGAATTGGGTATAACg
cttaaaatacctcaattacacctTATAAATAAGGACATAATAATatagaa
caatttgaggctcaaagtgccaaaaaaataagaacaaccaagcctcagaa
aaattttactggttcttataaaaactataaatgttttaattttactgATC
TCTGAAATTTAGCTCTACGTAATAATTCTGCGCCCTCATTATTATCAAGT
CATGACTATTAACAGTGCTTCTTTCAATGCGAATTTGGTCTTCACtcata
tgaaaataaaaatcttaatCAAATTCTTTATAATCAGGGGGACATCCACT
GTTTATCTGAGAACGTATATGAACCCAATATAAATATATATCAAAATATA
gatataaagaaaagaaaataaacattaGTAGAATGAGTTTTCAGTTATGA
TATTCTCCAAGCGACGTTATTGTAGTCGATAATGACCTGACAAATAAAAT
TGTGTTCAGAATGAAAGATGAAAGTCaggacaaaaaattatttttgaaaa
gctagAAGAAGATAGTTACAGAAAACCGTGATGTTGAAATCTTAACATCA
TCTAAAAAACTTTTGTATATAAGGATTTTAGCGCTAATATTCAAAGTTTA
ACACATTTGGAGGGATTTAGATCGTTTAtcgctaaaacttgaaaacactC
TTGAGCTTTTTTTATGGTTAACACTCAATGAGCTTTTTcgtgaaaaaagt
ttcaatgcATACGAAATTATTTCATTGGTGGAAGGAAAGGAAGCCATTTT
CAAGTTTCGATAATAAATTTTGCGAAACATGGTTTGGTGAGGAAGTAGGA
GCTATCAAAAAGCTAAATCATTGCCCGATATCATAATCATTGTTTTGTGT
TTGCAAATTTTCTTACAGACAAAGCAAAAAGTTTTGATCCTAATTAAATG
AAGAAATCCTCAGCATATGTGCTTCTATCCATTAAATCTTTAATTTGCGC
TCTCATTACACTGCAATATTCTGATAAGGATTGGGATCTCTATCTACAAA
TCTTAACTTTTGAAGCTGTGATTCTTGTTTTGTTATTGCTAGATGAAGTG
GTATATTATGCACCAGTTATCTTCACGAGGGGAGGTTTTCTGCGTGAGTA
TGAGTTTTTAAAGCTGCCACAGAGGCTGAGGAGATCatctatttcttcaa
aaaatctcTTTACGGTGCATGAACATAACATATTTGGGGCATACCGGAAA
AGTCTGATGGGTGAACccgggaacctaagtgggaaccctaAGTGGAAACC
TAAGTAGGAACCTTAAGTATGGAAATGCGGGTGGTGGTGGGGAACTTCAT
CTCagctgttttttgtttttttatcacttttagcATCAAATTGTTCTTTT
CATGTTCCTTATTTAAAGGGtatgtaattgaggtattttctGAAGCATAA
AAgcctttcattttttaccacttTAACCCCctggctcagcattgttctta
aatggTTCTagcttttttgtaattttaagcctcattgttcttataaaaga
aaaggagtgtagctggaacctaaGGCTCGTTATTAAAGACGAAAACCCAT
TTCTACAACATCAAGCTGAAGTTTAGGCTCATCAAAACCTATTTTAATTT
CAACTTTGATTCTAGAATTTACAAGCATTTTCGTCTTCCTTTGCattgat
aaaatcttttttaaatctttgcaCACTTATAAGAAATATAGGTACATAGA
CGTCTTTATACTaatagattaaaaatttagttcttgttcttataatagaa
tatttaacctttttttttgtGGTCTTGACTTGGTGCGAGtatgtttcttt
gtatttgtgtacgagtttatgtatatttcttatgtttgtttgtttgtttg
gactgcgggtcggttgacagggttatggaatctgggggaggctgagtgtt
ggacgtccttaaaacatgtttaaagcatgttaaagctcagaataagctta
actaaggctcaagaaTACATTACATTTTTGTTGGGCTTTGGGTAGTTNaa
agctcagaataagcttaactaaggctccagaatACATTACATTTTTGTTG
GGCTTTGGGTAGTTTTTAgatgttttcatttttgtcaTTGCTGTGTTTAT
GTTTCTGGTTTAAAACATTATATcaattggtttgttggttctctcttttt
cgcataaaattctcagtccctttttatctttcatttgtattttatttagt
attttcaacacttgctcttcttgaggtcagatctcagatcttcaccatat
ataatAGATTTACTCACTTGTGAAATCTTCCGATACAATTAGCTAGAAAA
CCCTGCTAGCCTTGGCTACGACATGTTTTCCTTCGTTTCGAGAGAAAAAC
TCATGGGGGTTACTGGTGGCcacctatagcagtgcctatagaccaagagt
aggGCCTAAAAGCCTAAAGCTGTCTATTGTGTTGTAGACTAATCCTACCT
CCTTTTAGAAAAGTCACAACGTAGGAGAGACAGTAAATAGCAAATCTGTT
AAGCTATTGTTTACTACTTTTCCCTCTCTCTATtgaaaccccgggggggg
gtactagggttggcgaatgaggggtatgtgcggacgggacctcaattttt
atttttcgatttttgaaaaaagttatacCCTTAGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TccccaaatttggggtaactctcggacgagaattttaGACACGATTAGCA
TCCcctatcaaaacatatcagagtgGATTCGTGCATcctaaaaacaaagg
aatctcGGTTAAAATCCGGCTACTTACTGTACAGCACTCATGTCAgtgtg
gggatggttttggagtgcaatttctaaacaatgaatttcgaatgggggtA
ACATCAAAGTCAATatctcagtggggctgaaattctagggtatttttccc
accggggccgtaatttttgccaaattttccagtgggactggggccccaac
gggtctgtgacacaggggtgttgtaCATGTTTCGTTCAGTTAATAGATAA
CCAAGCGGCTGGTCGTGGACACCGGGAAAACAATCGTGAGATCATTAGCT
AGAAAGTCCTAGCTTACTAAACTACCTATTTATCGATCTTTTCTATCTCT
CTAAATTTCTATTCAAGTCTGTCTATTTTGTCGCATTTACGTTTTAACAG
AAACGGGTTGTTGGTATCTTTTGGACCCTTAGTAGACTCCAAACTTGTTC
CCTTGCGTATTATTGGCTATTTGATACCTACTTAACTGATAGCGCAAGAA
TTCTATGGCGTCCCTCAATAACGAAAATAAAGCCTAGGATACACTGGGAC
GAGGTTGTGTAACTTGACTGTTGATCTTTTGTTCGCAATTAATCATAACA
AGACCGCTAAATATTATTGTTTCTTTGGTCTTCTACAGGTTATTGGGGAT
TCAACCAGATCGTGGAAGGTTTTAAAGAATGGAAAAGGATCAAGAAAGGA
ATGGGTAAATTGGCTATCGATGAAACAGGTTcgctcaattttatttttta
gtctCTAGCAACTGGCACataaaatcatttaatgttCGTACAAGGCTACA
AGGGCGTTGTGAACGTTGTGAACACGTTTTGTGCATCTCAGGAGTGGGGA
TACTCAAGGTTTGTAACGGACCCTAGGTTTCGCTCTTGGTGGTAAGTTTA
TCAGACTTAAAAGTAATCTGCAgatgttgaaaagataaaatgCAAATATT
TTAGCAAATTTTCGTACAATTTGCAAAGAGCTGAAAACAGTTGAATCATT
ATGACATAGTATGCTCGATTATCATGCTGATTCTTCCTAGTATAGCTTCG
ATGTCTAATCATTAAATGATGATGGGGATCGCTGTGATTTTAGATGATGA
TACTGAATGCGGGCCCACCGGTTTTTGTGTCATAATCCGGGGGTTAAACA
ATTCGAGcaaatttcaacaaaagttcgacgttttttttttgaaaattatt
tcatcaGTTTAAGACTGAAAAATTGTTTGACTGTACTTTACAGTGTAACG
TCTTTCTTAATTCACCCTCGCGTCAGGAAGCCTGAttgcctgtaccagac
gaccacggctttttcctcgcGACACCGTTACAGAGTGATAAAAAATTGCG
TGTTAAGATAGAGATAGACTTACCCAAATGTGTGTGTCGCAAATGCAAGG
CGTCCCAGTTACCCTCGTGATCAATTTCAGCCCTTTTGCGAACGGTGAAG
TATTTAAAGTTAGCCAAACCTTTTTCTGTTTACAGGACTAATGTTCGCAT
CATGCAAGATGATCGAGACAGCTTTGAAAAACGATGATTTAAACATCTTC
AACACGGTGAAGAAAGTGTGTTACAATGGGCAAACAATGAACACTTACTA
CTTACGTTACATCacacaaaaacttttgaaaaccacAAGTAATTTGTTTA
CCGTTTCCCAACTCAATTACCCACACGACGGAGCAGGTGATCGAGTCCAA
GGTATGGATAATGATTTAGCGGACTTTTTTACGGAAATGTCAAATCTGAA
AAATacgatcactttcgttttcgccgATCATGGGAATACGTATACGAATT
ATATTTACGCTGAAGTGGACGGGCGTTACGAACAACATCATCCACACTTC
TTTACCATCCTCCCTGAGAAAGTCATCAAAAGGCTTGGGTACGAGACTGT
CAATGCATTACGTCATAACCGATTACGATTAGTCAGTCTTATAGATTTAC
ATCATACGATCAAACGATTGGCGGATAGGAATTATCCAAAAAAGGGAATA
TTAGAAATGGTACCAGCAAACCGAACGTGTGGCGACTTGGAGCTTTCTAC
GCCAAATTTTTGTGTTTGCCAGGACTGGGATTCACCAATGATGAATAAAA
CATTATATTGGCCTTTCGTTGAATTTGCTGTTGGAAATATCAATAACATG
ATAAGTGATGTTTCGCCTGAATCACGGTGTAAAAGACTAGTTCCTCAACG
TTATGAGAACCTGATTAGCCGTAAGAAAGGAGCCAACATTGAGTTAAGTA
TGGATGTAGTGACAAAGCCTGGAGTTGGATCGACAAATAATGAAGAAAGA
TT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00065588	TCONS_00065588	Clytia hemisphaerica	transcript
TCONS_00065589	TCONS_00065589	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00065588-protein	TCONS_00065588-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_440	supercontig	scaffold_440:613055..620506 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.22	0.05	0	0.12	0	2.19	1.99	2.29	2.02	2.28	1.69	1.22	0.89	0.55	0.76	0.59	0.6	1.47	0.72	0.22	0.33	0.05	0.24	0.2	0.75	0.19	0	0	0

You are here

XLOC_041097 (gene) - C. hemisphaerica