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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_441:19767..26606+ Legend: transcript Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041137 ID=XLOC_041137|Name=XLOC_041137|organism=Clytia hemisphaerica|type=gene|length=6840bp|location=Sequence derived from alignment at scaffold_441:19767..26606+ (Clytia hemisphaerica)
ATCTTTTCCGATATTGAACCAAAAATAGTCATGCGAGCGGGAGACACGAA
CTGTTAAATTATTAGAGGACTGCCCCTTTTCTGATTTTCTTATAATCTAA
TGCGACAAAAGCTGTACGATGGAGAGGGAGCAATCAATCTTTAGTCTTTA
GCTTTTCTTCATCAATTATTGATAATGAGGGGAGGGAAAGACCAAAGAGC
GTCGAGAAAAAGACAACTCTCCATCGTTTTTATAATTGGTGTTTGCGAAG
CAGCTGTGAACATTTAAGAGATCAATAGACCCTGAATTATATTCAACCAA
CACAATCAATTCTTTCAAGCCgcattcaaataaaaagaaagctttattca
aaaaaaataataatacaaaaaaaaacttgaatgcatttttttttctttca
aaaaaaattgaagatttttgaatttgttgTGAAGAGAGAAAGAGgagata
aaaaaatcataagatCGAAGATTAAAAAGAAGGAACcaacgaaaaaagat
ttttcttcttAAAAGTCACTAACATAAAACTTATATACGTACGAATTAGC
AAGACTGACCTAAAGAAAACACACGCATAATATGCTATAATAATATCATA
AAGAGAAGTTGATCTCTTGTCATCATTGATCgatcaactttttttataat
tgttCTCTGTGTTGATCTTTCATCTTATAAtcataacaaaaagaaattgg
aTGTCATATTTTGGATGACACAAAAGAATAGGAAATTATATCAAGAAACG
GTTTTTTTTGTGTCATACTTAGCAACGTTTTATAGTGACAGTGtgttgta
tttttttgtgagtGAAAAGACAAAGATACAGAATGGCAGGTAAtataata
atttcttttttatacatTATCATAATTTTTGAGCATGATTTTTTATAGCT
AGCTGCAATGATCTTTCAGTATGGATTTCGAGCAGCTTGCAATCGAATAC
AGTATCCAATAATTTATAACTTACAGAGTTTACTTAGCCATTCTTTCCCC
GTTTTTAGCTAGGAATTAAGGTATGGATGAGCAAAACAGGAAAATTTAgg
gcaattcatgatattcatgatgtaatctttgcgCCTAAACGATAGATGTT
ACGTAACAACNCCATTCTTTCCCCGTTTTTAGCTAGGAATTAAGGTATGG
ATGAGCAAAACAGGAAAATTTAgggcaattcatgatattcatgatgtaat
ctttgcgCCTAAACGATAGATGTTACGTAACAACTTTGCCGCCATTATTG
GGGTCCTTGCTTGGAAAACCTTGGGGAACGCATTtgttttgccaccaata
atATGGCGGCCAAATTTTTTGATTCGGAGTGTCAATCAacgaaaagatta
catcatgaatatcaagaattttcttGTTGCAATTTATCTGTAAGAACAAT
AAGTCTCAACCAggggaaaaatcaaaacttgatATGTAAGCATCTGAAGC
ATAAGTTTAGGTACAAAGTGGCCTTAAGATAAAAACATCCAAGAGATTAA
ACCCTAGAGAGACTGGTTcgagatacacgtttttttataaaaacatccac
atCTTGGGATGTTCACaactttttgcaattttagcctaaaatgttcttaa
catgttctctttttaccattttgtgagtatttttggccattttcgtaaag
gattgggtgttttagagtccgcaaagccttaaaattatcttaacttgttc
ttagtattttggccatcgatgAAGCTTCTtatattgtttgttcttataag
aaaagacGTGTTAAATTAaccctcttttatcttttccagaTACATCGGAA
TCTGAGTTGATAGTCGTGCAACCATTATCACCACCGAACCTCCCTGaaaa
tgctgatgtcagcattggCGAACAAAACAATAACATTGGTAGCAACGAGG
GAGCAGGGGATCAGAAAAATATggtaattcaaaattcaaaatttactcTC
TTAAAAGGTCGTGATTTTTCataatttggacaaaaatggaGTGAACATCg
ataagaattttgaaaaaagtctcaGAAACGCCAATTTCCCTcactaaggg
tcgattttcgatttttggttCGGACATATTAAATAAAATAGTTTAAGAAT
GAAAAGCTGCCTATAAACATTGCTTAATCTAGGTCAATTTTAGAAGGAAT
CATAGTAGTAAAACCTGAGATGTTTCGTTTGTGTCATTAAAATAAGAACA
CGGTAAGAACAATGAGAACAATGGGCTGGTAGTAGATATACGAGATCAAG
TTGGCCTTGAGCTTTGGCAcgttttttatttcatatttttttcctgattt
ctcACCTTCGACTGCTGAAATTCTCCCAGCTCTTCCAGTAGATGATTGTT
CTTATAAGTTATTCCTATATTAATAATTTtctaattattttcttttcata
aGCTGGAAGACTTCACAACGATAGCATCTCCTATGCCAATGACGATTGTG
CCGTGTTTTGTGTGTGGCGATCGATCTTCGGGACGTCATTACGGCGTCCT
GACGTGCGACGGCTGTCGTGGGTTTTTTAAACGAAGCGTTAGACGGGGAG
TTGGATACCATTGCCGTGATAAAGGGCGATGCGTTGTGAATCTGAGTCGA
CGAAATCAATGTCAGAGTTGCAGGTTTAAGAAATGTTTGAGTGTTGGTAT
GAGAAAAGAGGGNTGCCTATAAACATTGCTTAATCTAAGTCAATTTTAGA
AGGAATCATAGTAGTAAAACCTGAGATGTTTCGTTTGTGTcattaaaata
agaacatggtaAGAACAAATGGTAAGAACAATGAAGATCAATGGGCTGGT
AGTAGATAAACGAGATCAAGTTGGCCTTGAGCTTTGGCAcgttttttatt
tcatatttttttccttatttctcACCTTCGACTGCTGAAATTCTACCAGC
TCTTCCAGTAGATGATTGTTCTTATAAGTCATTCCTATAGTAATAATTTt
ctaattattttcttttcataaGCTGGAAGACTTCACAACGATAGCATCTC
CTATGCCAATGACGATTGTGCCGTGTTTTGTGTGTGGCGATCGATCTTCG
GGACGTCATTACGGCGTCCTGACGTGCGACGGCTGTCGTGGGTTTTTTAA
ACGAAGCGTTAGACGGGGAGTTGGATACCATTGCCGTGATAAAGGGCGAT
GCGTCGTGAATCTGAGTCGACGAAATCAATGTCAGAGTTGCAGGTTTAAG
AAATGTTTGAGTGTTGGTATGAGAAAAGAGGGTAAGGCTTCATTTTTAAC
AGCACGTAAGGGGTATATCGCGGTtatagcatgaaggtagagcatccagc
ttaGGTGTGCAAGGTCGTGGGTTCNTGGGTATATCGCGGttgtagcatga
aggtagagcatccagcttaGGTGTgcaaggtcgtgggttcaatccctggc
cgggtcataccaaCGACGATGTACTTAGTGCAAGATGGTACCTGATGCCT
ATCTCTGCTTGATGTTCAGTAATAATAGGAAAATCGAgggcaatccaggg
agaaaaagTGGCGCCCTCTCCTACCTTTCGGATAAGACAGCtattgaaag
aggagccttcaggtcgcctctgattcatgatattcatgacgtaatgtttt
ctacggaaagacacCGGTTTttaccagtagtggcaaattttaaacaactt
ttgtctagtttaaatttgccactactggcttaAACCGGGTTATATTATTC
GAAAATGTTATAGAATGGTTTCCATATAAAATGATATCCTTTCAACCAAT
ATCAATTTCAAGGTTGCAGATCACCTTTCAAaagttaaatctttttttca
gcTGTTCAACACGAGCGTGCACCACGTAACAAAAAGGGTGGTCAAACACC
GGACCGCCCAAATGAATTTTCACCTTATCCGCCACAAATTGTTTACCATC
GAGTACCTGTATCAGGTAATATTTAATGATTCGACTTTGCTGTTCGCCTT
acacatttgttttttttaagaaacacacttttaagaaacatgaggctcag
aatgcctaaaaactaagaaacatgctgaggctgagaatgagaaaataaca
ttttttaattcggttttttttaagaaccttccaatccagcctttcataag
gctgattatgtcaaaaagatttagaaacatgtaagaaacatttaaggctg
aaaaggccgatttcttaagaaacattgaggctgcttggtaaaactatttt
ctttaaaaaaaaaacgtgtatacattGTTCTTTGAACtgttgttattgtt
ttgttttttttagtgtTGTTAACCATTTCATTGAAACAATTCCCTCGCGT
TGTTTGTTGCTTCCTTTTTTTGAACACTTTTTTATAGGGGGCGAGTCTCA
ATGCCAAAACAAAGGCAAAAGCTTTGGTGCAGGCTGGAGACTGGAGATCT
CCACTACGAGCTTACCATATAATATAACATAATAGCgattttatgtattt
gcacttttgaggacggtaaagcgatttggaatagccCGCAGTTCTCacct
gcaaaatcgaggacggtaaaagtgctgatttaccgtcgtcctcagttgat
caggatctactcaaactACTAGTAGAGCCTTACCGTCTCCGCCGCTGAAA
aatacacatacataaactcgNCTCAAACTACTAGTAGAGCCTTACCGTCT
CCACTGCTGAAAaatacacatacataaactcggtaatgaaGTTAAACACT
TGTAGTTAGCAAGTTCgataattgaaaataataattttttatcttctcgt
TTTGTCATTTAGGCGATGTCGCTGAACTACCAGTCACGTGCTCTAATATA
CCACCCGCAGCTCAAAGAGTACCGCCGACGCCTCTACCTACACAACGCCC
TAAGCCGCCTCAAGTCTTTGTGAACACACCCAAGGAGCTGTACGAAGTGT
GTGCTCGCCTGTTATACGAAGCTATCTCTTGGGCACGAAACATTCCGACT
TTTTCTCAATTACCGTTAGATGATCAGGCTTTACTATTGGAATACAGCTG
GAGTGAAATATTTCTACTTAACCTTGCGCAGCTCAATATTCCTCTTGGTA
TGGAAACAATGATCAAGCTGACTCAGCAATCTAAAGAATATCTGAACGAT
AAAAGTGATATTAACAAAGACACTTTAAACGAATTGGTGCATATACAATC
AGTTGTTTTCAAATTGAAAACATTAAACATGTCATCTGCTGAATATTCTT
GCGTCAAAGCCATTGTACTCTTCAAACCAGGTGAatttctttataaattg
ctCAAGTCAAGGGATCAACCTGCTGGATGTTTCTAGTGGGTGCCCTGAGT
ATtcagtaccttaagggaagaaattttggcgggaggGAAATTTGGTGGAT
TCGTCTGaaacccgccaaattaaattcctcacgaaaaaactttttcagcc
atGCGCCAAATTGAAtcccgccaattttttttccctTAAAGTACTTCTCA
ATATCCACATGGGGTGACATTCTTTCAGATGGGGTTACAGGGATGATGCC
TTCTTGACTCTACATGCGCCAATGAGAATCATCCATATATAAACAAATTT
ATAATCAAAACGAAAAATCACGAAATgagccaaaatttctttcattcaaa
aataattaGTTTTTGAATTAAGGTTAAGGTTTTTAGGTTTTTACCAGTTT
TCAAGATAACAATGATTTTACTCTTCTGAGGACGAATTATGCTTCCAAAT
GAATAGAATATACAGTTGACTGTCGCTAATTCGATATTTTATCATTCAAT
ACGCCCTATTCGGTAATATCGAAAGTCACCGTACCCTTCACAAGAATTTC
TTCTAGATAACGATGAAACTAaacttattcgatgaaaattaaattccctt
ttgaaaatcgaattagaaagcgtcaaCTTTATGACTATCTTCTTTTTTAG
ATCTTCGTCGAATAAAGTCTCGTCAACATATCGAAAACCTTCAAGAACAA
GCACAATTAAGACTCTTAGATTCTGTTATGGTAAAAGGACCTCGTGCAAG
GTTCGGAAAAATCCTTCTCAAATTATCACTATTGGGTGAAGTTTCCCCGT
CTTTCATTGAGAAATGTTTCTTCAAAGGTGGACTCGAAAATATAAGTGAC
GAATTTTGCAGTAGCTCCACTGAATCTAATTCTAACCAATCAGATATGAT
ATCAACACtcaagaaccaatcagaaaagaCTCCTGTTGATAGAAACCAAT
CAGAGGCAATCACGCCAGAAAACAATAAATCAATCAGCCAATCAGAAGGC
GAGAAAGTTAACGGTGACCAATCAAAAGACTTGAATTTCTTTAACCATGA
AATTAAACAAGAAGTTGAGGATATTGTGCAAGTTGTTGCTTCTGAAACTT
GATTTTTGTGAAGTGGAACTCCTCTAATTGCATTCAGGAGTCTAGGGTTA
AGGCTGTTGCCGTTACGAACTAAGAAGTTTACGAATTTTCCCCGTTGGGA
TACTGCAAAGATGCAGCTTTATCATGCATATATAATTTGGATAAGACCTG
CAGTTATTAACAATTTTTGTCACCCAGACGTTACTTTTCTTAAAGTCCTT
TGAACTCAAAAACTGTAGTCTCTTataagagaactaattttgcctaaaaa
gttttaaatttgcGGAACTTATGATTTTGGCGAGTGACACAAATTTTCCT
AAATGCTGAAAAGAGTATTTGAGTTGAGGAAAAAATTAGGGTTTTTTCAT
AATAAATTATGATTAATTAACTAGTGAATTTTGATAAACTCTTCGAACTA
ACTGAAATTAAacctcttttgttttgaaatttgtacttaAAGGAGATTTG
TAAATATTGAGATATATAGAATTGTTAACGAATAATATGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_441 | supercontig | scaffold_441:19767..26606 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| NR2E1 | nuclear receptor subfamily 2 group E member 1 isoform a | Homo Sapiens |
| NR2E3 | photoreceptor-specific nuclear receptor isoform b | Homo Sapiens |
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