XLOC_041159 (gene) - C. hemisphaerica

Overview
NameXLOC_041159
Unique NameXLOC_041159
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_443:175926..179882+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041159 ID=XLOC_041159|Name=XLOC_041159|organism=Clytia hemisphaerica|type=gene|length=3957bp|location=Sequence derived from alignment at scaffold_443:175926..179882+ (Clytia hemisphaerica)
gattTTAAATTGTAAACGAAAAATAGACGGGTGTTagcaatttttttcat
ataatcacttttcatttatcatcataaattttgcatattTAGAGCAATGG
AAAGtatacaattttatttttcagtttatAGATTAAGTTTTAGTACCTTT
AACGGGACAAATAAACTCTTCGAAATAGGTTTAGTTCTACATTTGAACCC
CTTGAAATGTCGAATCCAAAGGTTATTCATCCATGTGAATAGCGCATGGA
TATTATTCTCAAAACATTGATTCGAATTCACGCTGATTGGTTACTTCTAC
ATTTTACACGATCTGATTGGTTGTCGATGACGTACATCCTGAAAAATTGC
ATCAGCAGAcgattttctttttatctttgttgATTTTCAGCGTCAGTCAG
TCGTCGACAAGAAAACAAGATGGAGTAACGTAGAAAGATTTTCGCTTTAC
TCCCCAACCAAGCAGGTGcttgcacttgaaaaaaaataaagaaaaaaatg
gcgtAAGTGTTTTCTCttaaaattaaacttttcaaaTAAGTCTATCACTA
AATGTTCGTGTTAAAACATTCCCTGTAGCATCCCATGTTTAAAAACCCTG
TTCAGTGTACCCAGTTCTTCTTATTAGTTTCACAGGTTCCttcattttat
attatatttttgctTTACTTATACCTTCAAACAGAGTCTTTAATTCAACA
TGTCTTTGGTTcttgatataaattattttgaaaagttcTGGTTTAATATA
TATCTATTGACGGTTTTGCTTAAGATTCCCTTCCTTTTTACTAAGATGTT
CTAAGATTCCTCTGCCACTCTTCTACCAGAAAAAGACCAGAACTCATTGT
AGTTGATAAATGAGCTTTGGAAAGTAAGGCAGGAAGTAAGGAAGCACAAG
ACTAGCAGTATCTTTAGAGGAAAACCCTCATGCTGTCTTCCCGTGAAAAA
TAGCAGAAAAATCCTGGAAAAGTGGTCAAGAATCTAAGTGCAGTCGAATG
GGGGACTCTTAtgcaaaacaacaattttttcattaatctcattgtattag
agaaatgaCCAAACAGAGGTCTGCCTAAATTTCATTACCGTTGATTCTGC
TTGCAAAAGTTTGCCTAAAGTATCCAGTTCTTCTATATCAGACAAATTTC
CCTCTCACTAAAAAGATTTCTACTGAAGATTTCTacaaaaatgtccaaaa
aaattttgtgaggtcaaatttttatgagaataaccaaaatttgcaaaaac
tgAAATTACTATTATTATCAATTATCAAAGTAAAATTTATGGAGAAACTC
TGAATAGGGCACTTTGATAAGGGGTTTTAGCCTAGCAGAGCCTAGAATAC
GtatagaaaaagaaaacttgGAATCCTAATATTTATTTGATCTGGaattt
gcttcaaattatttAGTCAACTATttattttcttcacttttagCTCCCAA
AATGGATCAAACCGCTTCGCCTCTGGCACcttaaacaaaaataatcatGA
GCAGAACAAGAATCAGTTCGAAAATGGAACACAACAACAAATTGAATTCG
CTTTCGATGCTTCCAGGCAGCATCCTCAATGCCTGTAGTTTCAACAATGA
CACCGATGCCACCTTTCAACTTCTCTTCAACAACAAATCATTGGAGAACG
AGAAACAATCGTGCAATGGATATGGTGTCAATAATATTTCAGGTAAATAT
CTTNCACCTTTCAACTTCTCTTCAACAACAAATCATTGGAGAACGAGAAA
CAATCGTGCAATGGATATGGTGTCAATAATATTTCAagtaaatatctttg
tttcaattttatttagtcCACCTTATTATCTTTAATGAGCAACCCTAACT
TTATTCCTAGCCAAGGTTGCTTAGTATATATCAGTAAATGTGAGAAATTG
GCTATGATCATTCCTGACGTTATATTATTTTATGTCTATAGGGTCAAAGG
GCTTTAACTTTGTCATAGTTAGATAAATCTTCTAAAAGTTTTCTTTATGG
AATAATAAAAAAGGATCTTGCTGGCAGGGCTCAAGCCTATATTAAAATTA
AGATGAATTCAGAtgaattcacaaaaaaattctacATAAGCAGCTGTTTT
AAAATTAATGTATACTCTATTATAGGTGCTCTACTATCCTTTAAGAGATA
AGCGATGAAACTGCATCAGTCCTCTGATTCAAAAGTCACTAAGATATAGA
CATCGAAAGAGAATTTTGTGATCATTTATTTTGCATTGAAGATGACAAAC
AGAAATTAAGATAAATTTTGTAATAATtaagtgaaagtttgaagaagaGC
ACATGACTGACTTCCTTCGacttttgattggttgattttctCTGATTAAG
GAAAAGGAAGTTACTGGTTTTGTAGTAATTATAGAAATTGTTGTCCTAAC
AGTTTTCGATAAGAAGAGCTAtccattttaatttctttatatCTCGTTAT
ATAAACTTCCTTTGGTAATTTAGAATCCTGTGattcaaaaaatagaaata
agctAATTAAAGATTTGGACCTTGTTTTGTTATAACCCATAACCATCAAT
CAATCTGTAAAATCGTTATTGACAAATAGATTGCAGTTATTGCCCTGCTA
TCTTTCTAGCTTATTAACCATGTAACAATTATCTCCCTGGCTGGCTATTC
AAATATATCTAGAATTCTTTGAATAAGaaaatcctttcaattaaaggAAA
GAGGCTCATCTGTTAGAATGGCAGAATAGTTTGGATATAAAATAAGTTAC
ACTAAAGGTACACTGTTGCCTCATATCGCTCTTTCTTGCCAACTTGATAA
TCTGTTGCACCCAATTATTACTTAACAGTgctctctttctttcttttctt
cagaAACCAACAACTCTTTGTTGAAAACATTAGATTTCATTGATTCCAAC
ATCAACGAATATCCATCAGTGAAATCAGAAACCTACACTCTGGATGATCT
ACTAGATCTGGAAAATGAAGAGCTGGCACAAGTCCCTTATTACTATGACA
ACGCATCTTTTGATGACGAATCATTATTTGTACCATCAACTGAGATTCTA
ATGGATACTGCCTTAGCTTCGCCTTTGTCATCAAGCAGCGATGAATCTTG
CGATTTAAATGATCTCTTATTTATGTGCGATCAAGCTGCAGAAACCCGGA
CCCAAGAGCAGCCAGCTTCTGTTCAGGAAGTTACCGACCACCAATACGCT
CTTTTGGAAGATGCTCCAAAAGCAGACCAGGAAATCTCATTAGAGGATAT
GCTTGCTGGTAATACAACAGATTTAAGTGCACTTTGTTCGCTTTTGTTTC
AAGCAAAAGGAATTGAAGCACCTGAATTTTCTGCACTTGAAGAACAACCG
ACGACTGTTCTCGAAGAACCAACAGTCAGTGCTCCATTGTCTCCAGCTTC
TTCAGTTACGTCTTCAGAATCCGAATCTGAATCACGTCCAGCCCGTTACA
AGCCATACAGAAAGCAAAAGACCCCCGAACAGAAATTACGTAAGAAAGCT
CAGAACCGTACCGCAGCTACTCGATACCGAGTCAAGAAGAAGGATGAGTT
AAAAATTATGACGGATGAAGCAGACAAACTGGAAGAAACCAACAAGGATT
TGAAAGGGAAAGTTGATGGATTACGTAATGAGATAGATTATTTGAAGAAT
TTGATGTTGGATGTAATTAAAGCTCGATTAGCGAAAGGAGCAACCCCTGA
TGCTCTTCTCTCTGCAGCAGCTTTAatgttaaaatgaaaatgaagttttc
aaTTAAAGAGACAATGTTGtcattttatgaaatatttttttgaaccaTAG
ACATTGTGAtttgtttcttagtttttgtaTATAGTTTGTTTGTTGAATAA
TGGGTTATCTTGCTCCTTCACATTTAAAAACTCCGTCTCAGAATTTCCTA
TCCTATCCTAAGACAAAtaaagacaaatcactatctcagaaataagccca
aagccga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065693TCONS_00065693Clytia hemisphaericatranscript
TCONS_00065694TCONS_00065694Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065693-proteinTCONS_00065693-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_443supercontigscaffold_443:175926..179882 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
914.98	947.67	1167.32	1132.68	1316.28	1004.49	1495.82	1650.34	3058.09	2993.74	3694.61	3431.1	1741.19	1464.83	1111.19	1348.47	1082.28	1220.54	1119.03	1361.8	1052.97	1090.78	800.14	839.11	911.2	975.04	1093.31	871.63	1031.28	820.83