XLOC_041205 (gene) - C. hemisphaerica

Overview
NameXLOC_041205
Unique NameXLOC_041205
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_444:210691..220802-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041205 ID=XLOC_041205|Name=XLOC_041205|organism=Clytia hemisphaerica|type=gene|length=10112bp|location=Sequence derived from alignment at scaffold_444:210691..220802- (Clytia hemisphaerica)
AGACGGAGGAGAACGAAGAAGGCTTCCTTTGTCTTTTTCTGGTTATCAGG
TAAATACTGTTGAATATTTCTGGAAAAGGTAATAGAAAGGAAGGTAGAAT
AGTAAGGCAGCTGGGTTCATTGATGAGTGCTGTAGGTGCTAAGTTTTCAA
ACACACTTAGCTGCTACTTTTTATTTATAGCTATAGACCAGACCCCCGCG
CTCGATAGGATCGATCATCGGAACGGCTCGATGACGGATCGATATGTGAT
CGATGGATTACTTATCGATCCGGATAGGAGATCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCGTTAATCGATTCGTCATCGATCGTTAATCGATTCGTCATCGA
TCGTTAATCAATTCGTCATCGATCGTTAATCGATTCGTCATCGATCATTA
ATTGATTCGTCATCGATCATTAATCGATTCGTCATCGATCATTAATCGAG
TATGCATCGATTATAAATCGATTATGCATCGATTATAAATCGATTATGCA
TCGATTAAAAATCGAGCTAGGGCTCAGGCGAAATTCCGTAATCTAAACCT
TCCAGCAGATGTTGAAAGTTTCCCCAACCTTTTCCCCCAGAACTTTCTTA
GCGTGTCGAAAGAAAATTTCTACATCGGGTGCCAGATAAGTACCGATAAG
TAAATCCGGTTTGACGCCATTAGATCGATATGGATCGATTAATCAATATA
AAAAAACGGTCGATATTTTGATTGGATCGATAGAGGCGTCGATAGGTAAT
CGATAGGTGTCGATAGGTAATCGATAGGTGTCGATAGGTAAACGATAGGT
GTCGATAGGTAATCGATAGCGAGAAAGATCGATTAATATTAGAGCTCGAT
TTTCAGAAAGAGTCGATAGGGTCGATAAGATCGATAAAAGATCGATGATA
GATCGATGATAGATCGATGATAGATCGATAACTAATCATAAGCTTAAAAA
AATCTTGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GAGCCGTTCCGATGATCGATCCTATCGAGCGCGGGGGTCTGGTATAGAGG
CAAAAATTGAAAAAATAGCAAAACCGCATGAGGTTACGCCCTTAACGTAA
ATGTTTTTTAGGTTTTTTCAAAGCATTTTGATATAGAAAATTGGATGGGG
CATGGTCAGATGGTCCCACTTGCTGAAAAAATTTAAAATTTTTTTAGAAA
ACCTAATTTTTTAGCCAATTTTCATGATTTTGATGACGTCACAGAAATAA
GAATTTTAAGCTTTTGACTTCAAATTTTCACCAAATGTGTAAATCAATAA
AAGGAAGCGATTCAAACCAGACGTCCACGCTCGATCACTGCTGTTCCCCT
CAGGCAAAATTGTCGATTTTGTAGAGGTCACGAAATTGCCGAGTACAGAC
GTCAAAAAAAAAAATTCAAAATGGCTGCCGAGCGAGCACTGACAAAAACA
ACAAATCAGGAGTTTTCAATTGCCTACTACAGCAGAATAAAACAGAGAAA
TGCAGTAAAATAAAAAGTAAACAAACCTTGAATCTTTGGTTTGTCAAAAT
AAAGAAAATATTCTAGCCTCAGTAATGTTTACATTCAGAAATAAATCCAT
TTTCCACCAGACCTACAACACAACAGCCACCACCAAGGTTTCAAACCACG
CTGCGGCATAACTGGCAATGAATTCTGACTTAAAAAATGTGGGTCCAGTT
CCCTGAAAAGGGTATGATTACACTTCCAAATGACTTTTTTTTACAATAGC
ATTTTGTCTTCTCACAAATCCAAAAATATAGGTTATAAAACCAACACGGG
GGTCAACTTTCTTTACAACAAACCGTCAAATCAAACTTTAGAAAGATTAA
CCATGTAAATGTCACTTGTTTTCGTGATATTTGGATAATATCAAAACCTT
TTTGTATATATTTGGTTCTTCAAAACCATTTCCCTTTCCCGCAGCAGGCT
TTAAAGTTCATGTTGACCCCCGGTTTTTTTGCACGGTAATATAGAAAGGC
CTTTAGTGCGGTATAAACAAATGATTTCATTAGTTTAAAAAAGTCAAAAC
ATCAAGCTATATCACGTGATCAGAATCATGATCGGAGTGAACGGGAGCTG
TGGTCATACGTCATATGATATCCACGTGGGTCGTATCAATGTTTAGATTT
TTCAAGCGGGGATTTCTGTAGAATGATAAAATATGGCTTGGCTGGAATGG
ACACCATAACAGCAGTGTGATAGGATTGATCATCGGAACGGCTCGATGAC
GGATCGATATGTGATATCCTATGTGATAGGAGATGGATGGAAGATTCAGC
CATTAAAAAGTCTTCAGTATTGATCCTTCGTTGATCCATTATCGAGCTAT
TATTTCAATCGAGTATATCGATTCGTCATCGATTGTTAATCGATTCGTCA
TCGATCGTTAATCGATTCGTTGATCGTTAATCGATTTGTTATCAATCGTA
AATCGAGCATGAGTCGATAGGGTAGATAAGATCGATAACTAATCAAAAGC
TTAAAAAAATCTTGAGTATCAATCCTCTATCGATCTCCTATCCGGATCGT
TAAGTAATCCATCGATCACATATCGATCTGTCATCGGGCCGTTCCGATGA
TCGATCCTATCGAGCGCGGACGTCTGGTTAAAAGAAATAAACTTAAGGTT
TTTTGCTGACGTCAGCAAAAATTTTAATTTTTTTTCTTCGTAGATTGCTT
CCTTTTGTTAATTTACACCATTGGTGAAAATTTGAAATCAAAAGCTTTTT
CCTACTTAAAGTTATTCAAGATTTTCTTTTGATGACGTCATCAAAATGGG
GCAAAAATGAGGTTTTCTCAAAATTTTTCAATTATTGAGCATGTGGGACC
ATCTGACCATGCCCCATCTTATTTTCTTCGTCGAAAGAACCGAAAAACAT
TTACGTTAATGCGTGGAGCCTCATGCGGCCTTTGGGGAGTGCCTTAGGTA
CCCCGAGAATATTTACCGTCATCATTATATTTACCGTCAAAATTTACCTC
AGGATTAAGCCAGACCCGATCAATCGAACTTGTCGAGCCAATCGAACAAT
CAAAGTAATCTAACTCCATCGAACGATTAAAGTTTGATTAAAAAAATTAA
TCGAACTCTAAGATTTTTTAAAAGATTGTGAGTGTTCGATTAAGTTCGAT
CAATGGATTTCAGTTCGATAAGTTCGATAAACCAATTTTGTTTGACAAGT
TTGTGCTGCTCCGCCACCGTATATTAGCTTCTTTTTAAAGCCAAATTTGG
AATGTGAATTGGGAAATTACTTCCGATAACGAATTACACACTTTTCCTGT
ATTCTTTTAGCGCCAGAGCACAAATGTTACGCTGGGTTACGCGTAAGCCA
AATCGCGTATTACGAACAACCTAAATTGCAGAGTACAGGAGAAAAAAAAT
CGAAATTCAAAATGTCGGCCAAGCTCACAATGATAACTATCAAAAATCTT
CGTTTTTCAATCAGCTATTGCAGCTCAATAAATCAATGAAATAATTTGAA
ATAAAAAGTAAACAAACCTTGAACCTTTCATGAATCCAAATAAATAAAAG
TATTCTTCTAAAGTGAAGATTATATTTCAAAATAAAACGATTTCCAAACC
AACCTAAAGTCAGTGTCTGCCAACTAAAAATTTCTCTGCGGGGTCACTGG
CAAGGAGTTACGACTTCAGACTTTAGGGTTTGTTCCCTCCACCAAATTCT
TTATTTTTTTAAATCTCCCCCCTCTTTTTTTCCCCCTATGACTTTTGGGT
TTTTTAGTTTCCCCCCTTTTTTTTGCTTTCCCCCCAGAAAATTCTGAAAA
TATCAGTTCCCCCCATATATTTCTCAAATTTCAACTTTACACAAACCTAG
AATTTTGCTGCAAAAGGAATACTAGACAAAATAGAACGAAAATTGGTTAA
TTTTTCAATCATAATCTAAGCGCATGATATCGTGTGGACTGACTTTGGTT
GCTGTGATAAAGTTGAAGTGATTTCACACTCCCCCCCACCAAATTTGCCA
ACTATCGATGTTTTCCCCCCTCTTTATTTCCCCCCTTTACTATTCAAATT
TTCATTTTCCCCCCTCACCCATTCAAAATTGGTATAGGCTGCAACTACAC
TGCCAAATGATCTGTATTACATCCCCAAATGGGTCCATAAGTTAGGCGGC
AATCACAAATATCTTCATTTCGCGTCCTCGTTGGGTCGAAAAAGTGCGTC
GGTCGGTCGGTCGGTCGTAAAAATGTTCGGGTTTTCTTAAAATTGGACCC
AGTGAATTTCTTCTTCTCGTCCGACCTTAATCATCCATTTTTGGAGTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTCCGACA
AATTTACCGACTCACCGACTCAATTCTACTCAATTTTCGAGAGTCGGTCG
GGCGACGCGAAACGAAGATATTTGTGATTGCCGCCTTAAGAAAATGAAAC
TATCATCTAGCGCGGAGGTTATGTTTTTAAAAACAAACTTCAAAATAAAA
TTGTTAATGAACTTGTTACTTTAAAATATCACTTACTTACATAGTTTATG
AATGATATAACACCCCTTTCTTAAATAAATGGCCTCTTTAAGCCTTTTAT
GTTTGCCGCAAGAAGGGAGAAAAATTTAATTTGACCCCCGTTTTTTCTCT
CTTTTTCTCTTAACCATTTCCCGCGTGTTAGTGTAGACACAACTTTAATC
TGGGGAAATGAAGCGTTTTCATTGGTCTAAAACTTAAGTACCACTTCCCA
TTGAAAACAACCAAAAACGTTACTACCAAAGCCGGAGACCAAAAAAAATT
ATCTTCCTTGATGAGGGCACCCTTTTGGATCTATTGTTATTTCATTTAAA
ATGGTGGAAGTTGTGGATTGATAAAGGCGCCTGCTGATTCAAGGGTAGTA
ACGCCAAAATGTCCAATATGATCAGGCAACAAAAGGCGAGTTTGTTGCCG
CGTTTTGTTGCCGTGCAAGTTATGTCATGCACTCCACCATAGCGAAAGCG
CGAGGCATTTCATGGTTATAAGAATATCTTATGTGCTTTTAAATGCTATT
CAAATTTCAGTGCTTCATTGAAGATGAAGAAGGAGAAAGATAAAATATGC
GCTGACTTATTTTGCTTTTTTTAATAGATTTGCAGCCCTCAAATTTCAAG
TAGAAGTAAGTCGACACATAATAAGCCCAAAATATTGGTCAGCAATGCCC
GATCTGAGCTTTATTATAGGTCGACAAAGTTGTTTAAAGGCTACAGAAAT
GTTTTTTTTCTATTTGAAAGCTACAATGTTCAGTTAAAAGGTCAGCTTTG
CTGACCAAAAAGATCACTTATGGTCTGCTGCCGAGAGAATTTATTATTTA
TGGTCGGCAATGAACTGCCGATCATACACAGTCTTTAGTTTGTTATGTCA
TTGTTGAAAGTTGGAGAAATTTCTACCGATGCAGAATTTTTTTACAGCCA
ATTAAAGGCACAGTCAGCTTATACTCTTTATGTTTGCTTTATCGTCTAGG
TAAAAACGATAAAAATAGACCGGAATGTAATTTTTTTATGAGTGTGGTTA
TGATTTTTTGATTGCAGCCACATACAGGAACATACAAAATGTTCCTAACT
GTCTGTATCTCTATATTCCTATCTTATAATAAAGAGTTGGCACAATATCT
ATGTTTCAAACTCAGAGTTATATTCAGAGTTTATATGCTTATCTTAGAGA
TCAAAACCTCAATACAATTATAAGTTTTATAAGATACTTATTTAGAGATT
TAAAACCTTATNATCAAAACCTCAATACAATTATAAGTTTTATAAGATAC
TTATTTAGAGATTTAAAACCACAACGCCAAAGTGCCAGGCATATCTCCAC
ATATTCTTGTATCATTTTTGTATCTTGCCGAATGAGCAAGCACAGCATGG
GATTGAGCCCTGACCTCCTACACAAAGTTAAGGCTTAAAGCCACTACAAC
ACCCAGGCTAAAATTTACAAAGTGAAAAACATTTTGTTAGTGGCCATAGT
ATTATTATTTAGAATCATTTTAGCAATCCCTAGCTAGCAACTTCCTATTT
TACAAGCATGAATTTTGCTTTTATTACTTTATAAACGTTGTGTAATGTAC
TAGACTGTACTCTATTTTCTTATTTTCTTTGTAGATTTTCATGGAACTAA
AAAAATGAACATTAAGATTATTCGTTTGGAAAAGAAGGTGTTCAAACTAT
GGTGTGAAAAGAAGGAGCAATATGGTTTTGGTAGCAAAACGCACAATGAA
TTTGCAGTGTTTCTACTGGAGACCATCGTTGAGTTGAGCAATGATGGTGC
AAAATTTGTCCACGTTCCTATAGCTACAGACATCAACTTCGGAATTAAGG
GGAAAATTTCTAATCCAAACACTAAAACAAATAATGAAAACCGATCCACA
GAAAATGTTGGAGAGTCACCTGCTGAAGAAGATGATCGATTGACAAATGA
TAATCGTGTGAATGCATATCAGATGACCATCAAAGATGAATCTATTGATG
AATGTGAGACTGTTATCGTTATGCCTAGTGATGAAATCAACATGGACGAT
TTAAACACAGATGAATATACCCAGCAAAGTTTGACTCCAATTAAAAAATC
ATCACGTTTCTCAACTTTACAAACTGAACACCAATCTATTGACCTACCAC
ATAATTTTCTATCTAATTCAAAAAATATTACTCCAACTTTAGTTCCATGT
TTTGATAGAAATTTTGTCGCTACCTCAGAGATGTCAAACAAAACTACACC
AATGTTTGATTCATTTCAACCAAATAATCGACCAGTAACTTATATTTCAA
TCCCTTTACAAGATCCAAACAGTATGGTTCCAGTTTCTCCATCACATGAG
ACCTTCAGTGAAGTGACACCGATATATGTTCAACCACCCTTAACTTGTAC
CAATACACAACGTCTTATGCCTAATCAAGATGAAATACCTAGCAATATGG
CCGCACCAAACAGCTCTCCTGACAATCTTGACTTAATGCGAAAGGAATTT
GTTGCCCCTTCAAGTTATTCATATGGCCCACCAGAAGAGACACAAGAAGA
TCGCTCTGCTATAAGCAGCATTTTTCAGAGACTTATGAATCGAGGTTTTT
TACGACATAAATCTGAACTCGATCCCAATCTGACGCAACCATTACCTACT
TTCGACATACAAAGTGAATCTGTTGAAATTAGTAAACCAATTCTAAATAA
AGAAGAGGCTTGGAATAAAAATAAAGATGTTGAAATTGATGATGAAAGTA
GTAGAAAGTTCAAAATTGAAGGTGCATCAGTGGACGGAAGCGAAATTGGA
TTACAAGATGAAGAAGGGAGTCAGAGTGCATCTGAGGATGGTAGCAAACT
TGACCCTGAAGAAGGAAGCGAACTTGGGTCAGAAGAAGAGAGTGAACTTG
TGCCCAAAGAGGGAAGCGAACCCGGGTCAGAAGAAGAGAGTGAACTTGGA
TCTGAGGAGGGAAGTGAAATTGAGTCGGAAGAAGGAAGTGAGTTAGGGTC
TGAAGTTGGAAGTGAAAGTGCACCAATCACAGACAATGAATATGAAAACG
AAGAAGAAATAAGTGGAAGTGAAACTAATTCTGATGATGACAATGGGGAA
CAAGAAATTGGAGAAAATAAATCACTGAGTGACACCAAAAAGAAATTTGA
TACTTCTTATAAACAACTTCAAAATTCAAGAGACACTGTTTATCAGAAAA
ATCCTGATGTTCAGCCACTGCAAACAATGCTACCACCAATGATAAGTTCT
ACATATGATCACCAAGATATTCCAACAATGGTACCAACCTTGTTGAATGA
ACAATGTAACCCTATTTTGACACCTTTAATAATGACTCCTCCGCTTGAAT
ACCAACAAAGAGTTGCTCAGCAACAACCTCAAGGAATACTAGATAAATTT
TATGTTGACCAAAAGAAACCACCAAAAAAATGGACTTGTAAAAGAAATAT
GAAAAAAGAATCTCAAAATCAACGGCAAGGATATTCAGAAGCTATCAATG
GTATTTTTCAGAGACTGAAGGATAATCAAATATTGAGAAAACCTACAGCA
CCTCCCCAGGTAGAAATAGAAAGGATAGAGAGTGAACAGGAACTCGAACA
ACCCTCTAAACATTTATCACGTAGTGAACGTTATAAAACTCGGGAAGAGC
GCAAAAGAAATATTGATGATAATGAAAAGCCTTCTTTGAAGGATGATGAA
GAATGCATAAATGATAGCGAGAAACCTTTAAAGCAGCCACGAACGAATAA
AAAGGACTAGTGTTAAAGAGAATTTAGATGATAACAATATCGAAGTCAAG
ATGGAACAAACTGATGATTGATGTTCTTTTAATACACCTATCAACCCTTA
GCGCTTTTAAGGGGACTGGTAAAGAAAGTATAAAGGCCGGTCTCCACTTT
CGCGCGAAATGAGCGAAAACTTTTTGACGTTTTTGTAAGGTCATTTGTCG
GTTGAAAAATGAAGCAATTCCATTGGTCGAAATTGACATGACGGACGAAA
AAAGTAGAACTTCTTTCAACTTTTTTTTTGTTTGTGTGAAACTTTTTTAT
GACGTAATCTTAAGAAAAAAAACTGTTACCCATTTCGCGCGAAAGTGGTC
TTTAGTGCTTTTGAGGGGACTGGTAACAAAAATACAAGGAAAATTATTCT
AGAAGACGGCATTGAAAACACAATTGTAGGAGTGCTCTTTTGAAAAATTT
AAGATATACTCTTGCATTGAAGCGATTATAAAGTAACATCGATATAGTTA
AGTTATTCAAATACTAAAAAATAAATTCCACTCTACCGCAGAGACTTGGG
AAAATGCCTCTAGAGTTTTTGCGGTAATTTGCTTAGTTTGGTTTAGTTGT
AGCTTAAAAATAATGGGTTGATAGATGTATTGACTTTGGTTGTACACATT
CAAAAGTTCGCATCTTCTAGAAATTTTACTTTTTTAGGAAAATAATTTAT
GTTCAACCCAAGAAATTTTTTTAGTAGAATCAATTATTATTATTGTTAAA
AACAGTTAAGCTCAATTCTCATAATCCTATTTTCAATTCAATTTTTGCAA
TTTACAGCTTGAAAAATCAATAACAATATTNTCACGTAGTGAACGTTATA
AAACTCGGGAAGAGCGCAAAAGAAATATTGATGATAATGAAAAGCCTTCT
TTGAAGGATGATGAAGAATGCATGAATGATAGCGAGAAACCTTTAAAAAA
GCAGCCACGAACGAATAAAAAGGATTAGTGTTAAAGTGAATTTAGATGAT
AACAATATCGAAGTCAAGATGGAACAAACTGATGATTGATGTTCTTTTAA
TACACCTATCAACCCTTAGCGCTTTTAAGGGGACTGGTAAAGAAAGTATA
AAGGCCGGTCTCCACTTTCGCGCGAAATGAGCGAAAACTTTTTGACGTTT
TTGTAAGGTCATTTGTCGGTTGAAAAATGAAGCAATTCCATTGGTCGAAA
TTGACATGACGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065773TCONS_00065773Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_444supercontigscaffold_444:210691..220802 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.34	0.86	0.64	0.47	14.44	11.25	8.64	9.42	3.35	5.47	5.39	2.64	3.4	3.16	2.72	3.54	4.61	4.31	2.34	2.61	3.11	3.14	3.95	6.34	4.79	6.35	3.65	2.17	4.15	4.58