XLOC_041400 (gene) - C. hemisphaerica

Overview
NameXLOC_041400
Unique NameXLOC_041400
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:188453..191187+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041400 ID=XLOC_041400|Name=XLOC_041400|organism=Clytia hemisphaerica|type=gene|length=2735bp|location=Sequence derived from alignment at scaffold_451:188453..191187+ (Clytia hemisphaerica)
TTTTTATCTAGTTTTCAATCTATGTGggtgtttttttgaatttcttttcc
gTTATAATTTTTTAGCCACGATAAATTTTATTTCCATTGGACTATCACCT
TTCTTTTATAAGTTATACAAGAAAGATTCATTTCGAAGCATGTAGTTCTC
AAGAGAAAATTTTCCACTGAAAATGATATAGACTGGATTTACGTTGAACA
AATACTAATAAatctctctcttattcgattatTGAGAGGCTTAGAGAATT
TTACTCGATTTATAGAGCATTCTTTTgaggatttttgaaatttgagctCT
TTACGATTGATATGATTACGTCATAATAGAGATCCTTTCAAAAGGTAGTA
AGATGATGTCATAATACGTCATATGTATATTTTACGGAAAGAAAGTCATT
TTGACAGCATGAGAACTACTTCAGGCAGACAGTATGTGTTCTTTAGTCCT
CAGTGTGTGTTTTGATTTAGTATAAAGAAACGTGAAACCAGCGTGTTACA
GGAAGGAAGAGGCtgaacttaatttttgcaaatATATATAATGttgaatt
tgatacattttgaatttcaattttcttatttctatACTGATTGTATCACT
TGTATCAGATATCACTGTTACAGATTCGCTTTTGAAAATAGCTTGATTGA
TGAGTTTCTTGGGCTGGATTTCGACGTGTCAGACAAAACGGGATTCCTTT
TAGCGGGTATTATAGTAGTTAGTCACATTGGCAAATAGTCAGTAAAACAT
GAGGTCACATACTGTATTCTAGAGAAAATTCAAACATATGGCATTTTCAT
AGATCTATTGCCTGGAACCTAACTAACCTAACTTTACCTAACTTTACCTA
TTATAGCAGTTAGTCAGTCACATTGACAAATAGTCGGTGAGATTTTTAAA
ACATGAGGTCACAGgctatatctcggagaaaatcCTGTAGCATTTTCTTA
AGCTTATCACCAGCCTGGAACCTAGACTCACCTACCTTTCTACAGCTACA
ATCTAAATTAATCTGGAGGAGGGGCTGGAGATTTTGAGTAATTCACATAC
AAAACGGTGTTTTAAAAAGAACGTTATATTTAAGCGTTTAGTGTAGTTCA
GTTTGTCCTAAACGTCTGGTTTTGTCTAGTAGATGGAATGATATTTAGAA
TAACTTCATTTCCAGCAGGGAGTTTAAAACAAGTTTGATACAGAGGGGTA
TAACCACCGTTGAGGTTCAACAAAACATCCCTGTcttacagccccggtgg
aacttttttttctcagtcgggataaaaattcctattgaaatcccgatGGG
AATAGAACAATTATTGTTTCATAGTTAAAAGATGCAATAGGGATGGTTTT
GTTGTAAAATCTTGTGaagcattgaatttcgaatgggcataaaatcaaaa
tcaatttgcCAGTGGTGCTGAAAACCCCGGGTATTTTGCCACCACGGACA
AAATCTTCTTTCATTGGGGTAGGGGTTTAAGcgagtctgtgacacaggga
tgtatCTGATATATTCAGTTAAATTCAAATTGGTGTTTGGTCGCTGTAGA
GTTTTTCAATCTATGGTTCTGAATGGTTAAGATTGAATATttccactttc
actttctttatCTATTTCTTGTTATTTAGATAATTTGCAGCACCATGACG
AACACACCGTGCCCAGGATTTCATGCACCGCCGGCCCTGTCCGTATTCAC
ATCGGTTGTTTCCGCTGTTTTATGCATCTTGACTGTAATCGGAAATCTCC
TGGTTTGTTTAGCCGTTTTGAAAGATCCACAACGAAAATTACGAACACCA
TTCATGTTTATTATCGTGAATCTGGCCATTACTGACCTCATTGTTGGCAT
AGTAACGCTACCGATATCTGTGGTCACACATGCTTTAGAAGCCGTTGATA
AAAAGACAAATGATTACGTCACTGTTAGTCGAATGTTTTATTTCGTCACT
GTAACAGCAAGTACTTTTAATTTGATTGCGTTTTGTATCGATAGATTTGT
AGCAGTATCGAATCCAATAAAATATCGACAAATAATGCGATTTAAGATTT
GCGTATTCTTAGTAGCATTGATTTGGCTGTTATCGATTGGAATCGCATGT
ATTTATTTGGCTGTCGGTTATATCGATTTTATTATCTTTTTCGCTCAAAT
CTCAATGGCGTTAGTGTTAGTAATGTGTGCTATAACGGTTAGATTATTAT
GTATGCTGAATTTAAAAGCAAAGAAACGTCGTAAACTTACGTCGTCACAT
TCCCGTTTACAGAACGAACGTGTTACCGTGTTATTTCTCACGTTTTTGAT
CACGTTTCTGTTATGTAACACGCCAGCTATTGTCATGATGtatttgatca
aattttacACGACCATGGACTGTACTGTTCGACATGTTATACGAGATTTA
TCATTCCTATTTGTCGTTTCAAACTCAGCGCTTAATCCTTTATTCTGTAC
TATAAGACTTAAACCGTTTAACCAAGccattaaaatcattttcaactaTA
AAGCTGAAGGAATTGAATCTCCACTTTATGGCAGGAATGGATCATCTCAC
AGACGCAGTGATGCAATGAGACGGAAGTCGAGTGAGAAAAGTATTTTatt
ggagaaaaaaaagttgCAGAAGTCATCAACTTTGAAAGCTTGATATGTGT
TATCGTTCGATTGTGAATTTTTGGACGAGatttttattcattattttctt
tattaaCGACGTAGGAGGGACTTGATCTGATGCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066126TCONS_00066126Clytia hemisphaericatranscript
TCONS_00066127TCONS_00066127Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:188453..191187 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OR2G3olfactory receptor 2G3 Homo Sapiens
OR13A1olfactory receptor 13A1 Homo Sapiens
OR4F5olfactory receptor 4F5 Homo Sapiens
OR2J3olfactory receptor 2J3 Homo Sapiens
OR4K5olfactory receptor 4K5 Homo Sapiens
OR13H1olfactory receptor 13H1 Homo Sapiens
OR6Y1olfactory receptor 6Y1 Homo Sapiens
OR2A5olfactory receptor 2A5 Homo Sapiens
OR7A17olfactory receptor 7A17 Homo Sapiens
OR6C75olfactory receptor 6C75 Homo Sapiens
OR2W1olfactory receptor 2W1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.55	3.23	1.21	1.54	0	0	4.12	4.63	2.73	3.86	5.39	2.5	0.72	0.64	0.33	0.28	1.06	1.32	1.76	2.12	3.09	2.96	2.49	4.62	1.82	1.37	0.48	0.28	11.91	11.06