XLOC_041948 (gene) - C. hemisphaerica

Overview
NameXLOC_041948
Unique NameXLOC_041948
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_464:168992..171529+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041948 ID=XLOC_041948|Name=XLOC_041948|organism=Clytia hemisphaerica|type=gene|length=2538bp|location=Sequence derived from alignment at scaffold_464:168992..171529+ (Clytia hemisphaerica)
CATTAATGTGTTAGAAATGCAGGCAATACTCAATACAATCACTAAGTTta
caaaatacataaaaaattcaCACATTAAAGTGTACTGTGATAATGTTACT
GCTGTTTCAACTATCAATAAAATGGGAACCAGTCACAGCACTAATTGTAA
TAAATTAGGACAACTTATTTGGGAATACTGTATTGAAAATTGTATATGGA
TTACCTGTACATTCATTCCTGGAAAGGAGAATATTGAAGCTGATGCCCTG
TCTAGAAAGTTGTATAAAAATGCTGAAGCAATGCTTAATAGGGAGCTTTT
CAATGAAGGCATTAAACAGTTAAATTTCATGCCTGACTTGGACTGTTTTG
CAAGCCCCTCAAATGCCCAAATTGATAGATTTGTATGTAGATTCCCAAAG
AAGAACTCCTTTGCCACCGATGCTTTTACTGTCGACTGGTCAAAATATAA
GTGTTATTTATTTCCACCTTTTAGCCTAATCGGAAGAGTGCTACAAAAGA
TCAGAAGGGACAAGCCAAGAAGAGTCTTAATGGTTGTTCCTCGTTGGCCA
ACTCAAGCTTGGTATCCTATGCTAGAACGTCTTATGATTCGTGTCTATTG
TCAGGGCTGCATACATAGGTATGAAGATTTCACCCGAAGTGGTTGATGTA
ATCATGACAAGTTGGAGGAAAAACACATTGGCCAAATATAAACCCATTCT
TAGAAAGTGGTATACGTTTTGCTTAgaaaataaagtaaacattGTCCATC
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCATCAAATCTGAAAGC
CTACCTATCTAAAACTATAAATAATAGAACCTCTTACCCTTTGTTTATCA
GTTACATAAAACCATTCAAGCCTGTTTCAAAAGATATAGTTGCAAGATGG
TGCAAGGATTTTTTACAGTTATCGGGTGTTGATATCAAGAGATATACTTC
TCATTCTTGCAGGTCTGCTGGGTCGTCgaatttgaaaacaaagattGATG
TAAAGAAGATACTAGACTCAGCAGGTTGGTCATGTGAATCGACCTTTGCA
AGGTTTTACGACAGACAAATCGAAACATCCATTGGTACTGCTATGATTGA
TACATGAACATTATTAAATGAATATGTTGATAAATGAACATTTTGAATGA
CTTTAAACATTTGCGTTAtgaattatattatattttccaGTCACTTTGTG
GAATAGTAACCTTACATCCCATAATAAGCGATTACATTTGAGTTAAAAAC
CAAATATTAGTTTATGAAAAAGTCAATTCTTTTCGAAATTGTGTTATTCT
ctgtaaaattctttaaaatataaatatacatGCAAGGATAAACAAATCCT
TTGTTCAGTGTCTCTTATATTTAATAAGTCACATGTTATTCCGAGGCTAC
GAAGTCTCACCTAGCTCTCTAGAGACCTGGAAACTAGAATGCCGTTGAAT
TTACGAATTCAACGAGACTTACCTGTAAGTTGAAGTTGAATGAGAATTCT
ACAAATTCTAGTTTCCAGGTAAATAGGGAGTTAGGTGCCCACCCACCACA
TTACCCAGCACCCTATTTCCGGAAAAACATGAGACTGTACTACTTCGAAA
AATGATTCACTGTGCCGCCCACGCTCGCTATATCTCACCTAACTCCCTAT
TTACCTGGAAACTAGAATTTGTAGAATTCTCATTCAACTTCAACTTACAG
GTAAGTCTCGTTGAATTCGTAAAATCTTTGGTTCAGTCAAATTGAACGAG
TCAATATGCAACTTTAGTCAAatttacattctggtctgtaaaattaaGCC
atctgaagatgagtaaaattgaCTATAACTACCTTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067139TCONS_00067139Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:168992..171529 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.34	2.63	1.41	2.32	5.22	4.04	4.02	3.84	2.33	2.98	2.26	2.8	2.42	3.83	1.48	2.07	1.94	1.73	1.02	1.46	3	3.59	2.2	2.03	3.9	3.27	1.76	1.43	2.55	2.32